| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is 66045880
Identifier: 66045880
GI number: 66045880
Start: 3212729
End: 3214660
Strand: Direct
Name: 66045880
Synonym: Psyr_2644
Alternate gene names: NA
Gene position: 3212729-3214660 (Clockwise)
Preceding gene: 66045876
Following gene: 66045882
Centisome position: 52.72
GC content: 50.67
Gene sequence:
>1932_bases ATGGAGAAAAATTTCCACGAGGAAGCCTCTCAACCAGGTGTATTCACACTGAACGAGGGAAATATTGAAGCGGAGAAAGC CATAGCTGACGCCGAAGCGGCTATCAACTTACTTACCGGTACCCTCGATGCTCACATGATGGCAGGCAAAGAGGCTAAGG CAGCTCAGGAGCTAGCCAAAGATAAGCTTAAAGACAGTATCTGGAAGCACAAGACTCCTTTTGACAACAGCCCACTCGCC TACTGCTTCAATCGCCTTAATACTAAGGAACGAGTGCTTGAAGCAGTCGCACAGGTGGCATTAGCGCCCACGACGGATAC GCCTGACGCTCTACGTGCTGAGGCTGCAGCCCTTCACGGAGCAAGTGATGCCGTGCTCCCGGCTATACCTTCGATAAAAT TTACAGGCGGTGAAATTGAAGCAGACCTGATCTTAGTAGAGGTAATTTCAGGTAGCGGAGATTCCTACCTTTCGGCTCTG ATACAGGAATTTGGTAACTCAGATTGGGTGAAACACGCACTCAAATTTGAGTCACATGCGAAAGACCAGTGCCCCCTGTG CCAGCAGTCGCTACCTCAGGACTTTTACGGGGAAGTGCGCAAGGTCTTTGACGTGACCTATGAGAAACGCCTGGCTGCAT TGAACGCCCTACAGCAGAGGTACCAAGGTGCTGTCGAACAGCTTCTCCGCCAGTGCAATGGGCCAACCTATGAAATAGAG GCGATCCAAATCCATGCCGTAAATCTGCGGGCGCTTCTGCAAAGGAACCTTCAAATCTTAGCGACGAAGGTTTCTAACCC TACAACTGCCGTATCTCTGGACTCTAGCGCAGCCCTGCTCAAGTCTTTGAATGACTCTATTGCCGTTGAGCAGCATAAGA TTGATGAGTTCAACGCCAAGGTCAAGAACAAGCAAACACACCTGGATAGCATCAAAGACCGTTTTTGGGTTTGGCTAAAA AATGCTTGCGAACCCCAGTTAGCGGCGTTCGAGACAGAAGACCAGCAGCTATCGAAAAAAAGGCAGCAGGCCAAGGACGG CGTCGTGCAAATGAGGGCTGAGATCGCCGTTCAGCGAAATTTAATTGCCGCATCGCGCGCCGCGACCACGAACGTAGATC AGTCCGTGGAAAGCATTAACCAATGGCTCAAGATCCTTGGGTTGAAAGGGTTCGAGTTGGTCAAGGAGGAGGGCGCGGTT CCCCGATACCGCCTTCAGCGTGAGGCGGTGAACGATGGCGTGTTCAGGACACTGAGTGAAGGGGAAAAAACCCTGATTTC ATTCCTGTACTTCCTGGAGGTGTGTAACGGTGAGCTGAATGCCCAAGGAGGTACGCTGAAAGGTGAGCGCATTATCGTTA TTGACGACCCTATTTCGAGCCTGTCACATAACTACGTCTACGACATTGCTTCCTTGATTCGCCGCCTGGTGCTGCACCCG AGGACTCGTTTCAAGCAAGTAGTCATCCTGACCCACAATTTGTTCTTCTTCCATGAGATGCACAAGCTGTTAAAAGAGGA CAAGGAAGACTCTCTGGCCCTTTTCCGCATTTGCAAGGCCCACTACAGCACCGTGGTGCCTATGGGTGAAAACGAAATCC AGAATGATTACCAAGCCTGCTGGCACACACTCAAGGACGCCTTGAATGGCTCAGCTTCAGCCAGCGTCATTCCCAACGTC ATGCGTAACATCCTTGAGCATTACTTCACCTTCGTACATCAGAAGGAGAGCTTGCGCAGGGCATTAATGGAGCTCAGTGA CGAGAACCCTCAGTTCCGGGCCCTCTATAGGTATGTAAACCGAGAGTCCCATGCCGACTCCATCAATTTAACGGACTTCG GCGAAATTGATCCACACGCGTTCATACAACGGTTCAGAGAGGTTTTCGTAAAAACCAATTTTGAGGCCCATTTCGACAAA ATGATGGCCTGA
Upstream 100 bases:
>100_bases GATCGGTAACTATCTACAAGCGCCGGCGGATACGAAGTTCAGTGAGTGCCAGCTCGAACCGGTCAAAGAGCGGGAAATCC TCGTTTACAACCACAGCTTC
Downstream 100 bases:
>100_bases CAGCGATACGTGTTTACCCAAGGGACTGGCCCTAGCGAACGCGCGCCGATAGCATTAGGCCTGCAGCTACCACCTAGGAC TCTCCATCCTGCCTGTCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 643; Mature: 643
Protein sequence:
>643_residues MEKNFHEEASQPGVFTLNEGNIEAEKAIADAEAAINLLTGTLDAHMMAGKEAKAAQELAKDKLKDSIWKHKTPFDNSPLA YCFNRLNTKERVLEAVAQVALAPTTDTPDALRAEAAALHGASDAVLPAIPSIKFTGGEIEADLILVEVISGSGDSYLSAL IQEFGNSDWVKHALKFESHAKDQCPLCQQSLPQDFYGEVRKVFDVTYEKRLAALNALQQRYQGAVEQLLRQCNGPTYEIE AIQIHAVNLRALLQRNLQILATKVSNPTTAVSLDSSAALLKSLNDSIAVEQHKIDEFNAKVKNKQTHLDSIKDRFWVWLK NACEPQLAAFETEDQQLSKKRQQAKDGVVQMRAEIAVQRNLIAASRAATTNVDQSVESINQWLKILGLKGFELVKEEGAV PRYRLQREAVNDGVFRTLSEGEKTLISFLYFLEVCNGELNAQGGTLKGERIIVIDDPISSLSHNYVYDIASLIRRLVLHP RTRFKQVVILTHNLFFFHEMHKLLKEDKEDSLALFRICKAHYSTVVPMGENEIQNDYQACWHTLKDALNGSASASVIPNV MRNILEHYFTFVHQKESLRRALMELSDENPQFRALYRYVNRESHADSINLTDFGEIDPHAFIQRFREVFVKTNFEAHFDK MMA
Sequences:
>Translated_643_residues MEKNFHEEASQPGVFTLNEGNIEAEKAIADAEAAINLLTGTLDAHMMAGKEAKAAQELAKDKLKDSIWKHKTPFDNSPLA YCFNRLNTKERVLEAVAQVALAPTTDTPDALRAEAAALHGASDAVLPAIPSIKFTGGEIEADLILVEVISGSGDSYLSAL IQEFGNSDWVKHALKFESHAKDQCPLCQQSLPQDFYGEVRKVFDVTYEKRLAALNALQQRYQGAVEQLLRQCNGPTYEIE AIQIHAVNLRALLQRNLQILATKVSNPTTAVSLDSSAALLKSLNDSIAVEQHKIDEFNAKVKNKQTHLDSIKDRFWVWLK NACEPQLAAFETEDQQLSKKRQQAKDGVVQMRAEIAVQRNLIAASRAATTNVDQSVESINQWLKILGLKGFELVKEEGAV PRYRLQREAVNDGVFRTLSEGEKTLISFLYFLEVCNGELNAQGGTLKGERIIVIDDPISSLSHNYVYDIASLIRRLVLHP RTRFKQVVILTHNLFFFHEMHKLLKEDKEDSLALFRICKAHYSTVVPMGENEIQNDYQACWHTLKDALNGSASASVIPNV MRNILEHYFTFVHQKESLRRALMELSDENPQFRALYRYVNRESHADSINLTDFGEIDPHAFIQRFREVFVKTNFEAHFDK MMA >Mature_643_residues MEKNFHEEASQPGVFTLNEGNIEAEKAIADAEAAINLLTGTLDAHMMAGKEAKAAQELAKDKLKDSIWKHKTPFDNSPLA YCFNRLNTKERVLEAVAQVALAPTTDTPDALRAEAAALHGASDAVLPAIPSIKFTGGEIEADLILVEVISGSGDSYLSAL IQEFGNSDWVKHALKFESHAKDQCPLCQQSLPQDFYGEVRKVFDVTYEKRLAALNALQQRYQGAVEQLLRQCNGPTYEIE AIQIHAVNLRALLQRNLQILATKVSNPTTAVSLDSSAALLKSLNDSIAVEQHKIDEFNAKVKNKQTHLDSIKDRFWVWLK NACEPQLAAFETEDQQLSKKRQQAKDGVVQMRAEIAVQRNLIAASRAATTNVDQSVESINQWLKILGLKGFELVKEEGAV PRYRLQREAVNDGVFRTLSEGEKTLISFLYFLEVCNGELNAQGGTLKGERIIVIDDPISSLSHNYVYDIASLIRRLVLHP RTRFKQVVILTHNLFFFHEMHKLLKEDKEDSLALFRICKAHYSTVVPMGENEIQNDYQACWHTLKDALNGSASASVIPNV MRNILEHYFTFVHQKESLRRALMELSDENPQFRALYRYVNRESHADSINLTDFGEIDPHAFIQRFREVFVKTNFEAHFDK MMA
Specific function: Unknown
COG id: COG4694
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72452; Mature: 72452
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKNFHEEASQPGVFTLNEGNIEAEKAIADAEAAINLLTGTLDAHMMAGKEAKAAQELAK CCCCCCHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH DKLKDSIWKHKTPFDNSPLAYCFNRLNTKERVLEAVAQVALAPTTDTPDALRAEAAALHG HHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC ASDAVLPAIPSIKFTGGEIEADLILVEVISGSGDSYLSALIQEFGNSDWVKHALKFESHA CCCCHHCCCCCEEECCCCCCHHEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHCC KDQCPLCQQSLPQDFYGEVRKVFDVTYEKRLAALNALQQRYQGAVEQLLRQCNGPTYEIE CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE AIQIHAVNLRALLQRNLQILATKVSNPTTAVSLDSSAALLKSLNDSIAVEQHKIDEFNAK EEEEEEHHHHHHHHCCHHHEEEECCCCCEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHH VKNKQTHLDSIKDRFWVWLKNACEPQLAAFETEDQQLSKKRQQAKDGVVQMRAEIAVQRN HHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIAASRAATTNVDQSVESINQWLKILGLKGFELVKEEGAVPRYRLQREAVNDGVFRTLSE HHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH GEKTLISFLYFLEVCNGELNAQGGTLKGERIIVIDDPISSLSHNYVYDIASLIRRLVLHP HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC RTRFKQVVILTHNLFFFHEMHKLLKEDKEDSLALFRICKAHYSTVVPMGENEIQNDYQAC CHHHHEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHH WHTLKDALNGSASASVIPNVMRNILEHYFTFVHQKESLRRALMELSDENPQFRALYRYVN HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC RESHADSINLTDFGEIDPHAFIQRFREVFVKTNFEAHFDKMMA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCC >Mature Secondary Structure MEKNFHEEASQPGVFTLNEGNIEAEKAIADAEAAINLLTGTLDAHMMAGKEAKAAQELAK CCCCCCHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH DKLKDSIWKHKTPFDNSPLAYCFNRLNTKERVLEAVAQVALAPTTDTPDALRAEAAALHG HHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC ASDAVLPAIPSIKFTGGEIEADLILVEVISGSGDSYLSALIQEFGNSDWVKHALKFESHA CCCCHHCCCCCEEECCCCCCHHEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHCC KDQCPLCQQSLPQDFYGEVRKVFDVTYEKRLAALNALQQRYQGAVEQLLRQCNGPTYEIE CCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE AIQIHAVNLRALLQRNLQILATKVSNPTTAVSLDSSAALLKSLNDSIAVEQHKIDEFNAK EEEEEEHHHHHHHHCCHHHEEEECCCCCEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHH VKNKQTHLDSIKDRFWVWLKNACEPQLAAFETEDQQLSKKRQQAKDGVVQMRAEIAVQRN HHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIAASRAATTNVDQSVESINQWLKILGLKGFELVKEEGAVPRYRLQREAVNDGVFRTLSE HHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH GEKTLISFLYFLEVCNGELNAQGGTLKGERIIVIDDPISSLSHNYVYDIASLIRRLVLHP HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC RTRFKQVVILTHNLFFFHEMHKLLKEDKEDSLALFRICKAHYSTVVPMGENEIQNDYQAC CHHHHEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECCCCCHHHHHHHHHH WHTLKDALNGSASASVIPNVMRNILEHYFTFVHQKESLRRALMELSDENPQFRALYRYVN HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHC RESHADSINLTDFGEIDPHAFIQRFREVFVKTNFEAHFDKMMA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA