| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045865
Identifier: 66045865
GI number: 66045865
Start: 3189024
End: 3191015
Strand: Reverse
Name: 66045865
Synonym: Psyr_2629
Alternate gene names: NA
Gene position: 3191015-3189024 (Counterclockwise)
Preceding gene: 66045866
Following gene: 66045864
Centisome position: 52.37
GC content: 57.78
Gene sequence:
>1992_bases GTGACAGTGCGCAATTTTTCACTGACCCTCATAGCCTGCGCGTGCCTGGGGGCCGGCTGGGCCTCGGCGGCCGACAAACC GTTGTTGCAGGAAGGTAAAAAGACTCTGTTCCAGCGCGTGCTGACGACTCCGGGTTGCCACATGAGTGCAGCCGCTGGCG GCCCTGCCGGTGCCGAGCAGCCTCCCTTTAGTCGTTTCTATGTCTACGAGCATGCCAATGCAGGCAATGCCGAGTGGATC AAAGTGGGGCCGGACAGCTTTGGTAAAACCTCAGGATGGCTACCAGCATCGTGCACCGTCGACTGGAAAATGCAGCTCAC CCTGGCGTTCACCAACCCGGCCAACCGCGACCGGCTGATGTTTTTCAAAGAACGCAAAACGCTTGAGAGCATTCTGGACG CGCCAGACCCGGTGAGCCTTGTCGCACCGTTACGCGCCAAGCTCAAACAAAGCGCGCCGGCGCCGGGTGTACTGGCCCAG GAGCCGGAATACTTCATCGACATGCAGAAGCAGTTTTATTTGCTGCCGGTTCTCAGCGGCGAAGAAGTCATGACCGAAGC GGGTTTTCGCACTCGCATCCTGAATGTGGCTTCAGTAAGTAAGGCCGATGCAGCTTTAGCTGCTCAACAAGCGCAGACCG GAACGACTCAGGGCCAGAACCAGGGCCAGGCCGCGGCAAACGCTACCAGCCAGCTCAAAGAGTTCAGTGCCGCGGTGGTG TTCGTGATTGACTCGACTATTTCCATGGATCCGTACATCGAACGGACCCGAGAAGCGATCAGCAAGGTATACGCGCAGAT TGCCAAGGAAAATCTCGGGCGGCAGGTGAAGTTCGGTCTGGTGGCATTTCGTTCCAGTACCCAGGCTGTGCCAGGGCTGG AATACGTGACCAAGATGTATGCCGACCCCAACACCGTAAAAGACGGTGCGGATTTCCTTGCCAAAGCCGCGGACCTGAAA CAGGCCAAAGTGTCGAGCAAGAGCTTCAATGAAGACTCCTACGCCGGTGTCATGCAAGCCATCGACAAGGTCGACTGGAG CCCATTCGGTGCGCGCTATGTGGTATTGATCACCGATGCCGGCGCTCTGGATGGCGATGACAAGCTGTCCGGGACCGGGC TGAACGCGGAGCAGGTACGGATCGAAGCCAGCAACCCGGGCGTCGCCATTTACACCCTGCACCTGAAAACGGCGGCAGGT GCCAAGGACCACGCCAATGCAGAGGCGCAGTATCAGGCGTTGTCCACTTACACGGGCACCAACACCTCGCTTTATTACCC GGTTGATGCAGGTGATCTGGATGCCTTTGGCAGCAAGGTCGACGCGCTGGCCAGCGCAATCACCGGTCAGGTCAAAGCCG CCTACATGGGCGACGACGCTATTGGAAGTGCATTGAACTCCAAGGCTGCGCCTGCCGAGCAGAAAATGCTCGATGATGCT GCTCTGATTGGTCATGCCATGCGCTTGGCCTATCTCGGAGAAAAGACCGGCAGCCAGGCACCACCGGTTTTTCAGGCGTG GATCGCCGACCGCGACCCGATCAAGCAGAACGTCCCCACTACCGATGTGCGGGTTTTGCTGACCAAATCACAGCTCAGCG ACCTCAGTGATGTGCTCAAGAAAATCCTTGATGCCGCCAACGAAGGCCTGATCTCCCCAAGCGAAATGTTCGAGCGGTTA CGCTCGGTCGCCGCCACGATGGGTACAGATCCCAATCAGCTCAAGCAGGACGGTACTGCCAAGCTCTCGGAACTGGGTGT GTTGGGGGAATATCTGGACGATTTGCCGTACCACAGTGAAGTCCTCAACCTCGATGAAGAAACCTGGAAAAGCTGGGATG GTCTCGCTCAGGAGAAATTCATCCGTACCCTGTCGACCAAGCTGCGCCATTACCAGGTATACAACGCAGATGTGGACCGC TGGGTGCCGTTGGCCGAGGGTAGTGATGCCCGTGACAATGTTTATCCGGTGCCACTGGAAATGATGCCCTGA
Upstream 100 bases:
>100_bases CCGCCCCTGACAACGCCACTGCCGCTTACTGGTACGAAACCATTCTGGGCTATCAGGCAGACAACGCAGAAGCCGCTCAG CGCCTGAAGGAGCTCAAGCC
Downstream 100 bases:
>100_bases CATGCTCCAGATCAAAGGACTGAATGTGCAGCGAGGGAGCGGCGTACAGGCACATCGGGTACAGCTGCCCGAGCTGAGTC TGACTCGTGGGCAGGTCGTG
Product: von Willebrand factor, type A
Products: NA
Alternate protein names: PpkA-Related Protein; Serine/Threonine Protein Kinase; Serine/Threonine Protein Kinase PpkA; Von Willebrand Factor Type A Domain-Containing Protein; Protein Kinase; Exported Protein
Number of amino acids: Translated: 663; Mature: 662
Protein sequence:
>663_residues MTVRNFSLTLIACACLGAGWASAADKPLLQEGKKTLFQRVLTTPGCHMSAAAGGPAGAEQPPFSRFYVYEHANAGNAEWI KVGPDSFGKTSGWLPASCTVDWKMQLTLAFTNPANRDRLMFFKERKTLESILDAPDPVSLVAPLRAKLKQSAPAPGVLAQ EPEYFIDMQKQFYLLPVLSGEEVMTEAGFRTRILNVASVSKADAALAAQQAQTGTTQGQNQGQAAANATSQLKEFSAAVV FVIDSTISMDPYIERTREAISKVYAQIAKENLGRQVKFGLVAFRSSTQAVPGLEYVTKMYADPNTVKDGADFLAKAADLK QAKVSSKSFNEDSYAGVMQAIDKVDWSPFGARYVVLITDAGALDGDDKLSGTGLNAEQVRIEASNPGVAIYTLHLKTAAG AKDHANAEAQYQALSTYTGTNTSLYYPVDAGDLDAFGSKVDALASAITGQVKAAYMGDDAIGSALNSKAAPAEQKMLDDA ALIGHAMRLAYLGEKTGSQAPPVFQAWIADRDPIKQNVPTTDVRVLLTKSQLSDLSDVLKKILDAANEGLISPSEMFERL RSVAATMGTDPNQLKQDGTAKLSELGVLGEYLDDLPYHSEVLNLDEETWKSWDGLAQEKFIRTLSTKLRHYQVYNADVDR WVPLAEGSDARDNVYPVPLEMMP
Sequences:
>Translated_663_residues MTVRNFSLTLIACACLGAGWASAADKPLLQEGKKTLFQRVLTTPGCHMSAAAGGPAGAEQPPFSRFYVYEHANAGNAEWI KVGPDSFGKTSGWLPASCTVDWKMQLTLAFTNPANRDRLMFFKERKTLESILDAPDPVSLVAPLRAKLKQSAPAPGVLAQ EPEYFIDMQKQFYLLPVLSGEEVMTEAGFRTRILNVASVSKADAALAAQQAQTGTTQGQNQGQAAANATSQLKEFSAAVV FVIDSTISMDPYIERTREAISKVYAQIAKENLGRQVKFGLVAFRSSTQAVPGLEYVTKMYADPNTVKDGADFLAKAADLK QAKVSSKSFNEDSYAGVMQAIDKVDWSPFGARYVVLITDAGALDGDDKLSGTGLNAEQVRIEASNPGVAIYTLHLKTAAG AKDHANAEAQYQALSTYTGTNTSLYYPVDAGDLDAFGSKVDALASAITGQVKAAYMGDDAIGSALNSKAAPAEQKMLDDA ALIGHAMRLAYLGEKTGSQAPPVFQAWIADRDPIKQNVPTTDVRVLLTKSQLSDLSDVLKKILDAANEGLISPSEMFERL RSVAATMGTDPNQLKQDGTAKLSELGVLGEYLDDLPYHSEVLNLDEETWKSWDGLAQEKFIRTLSTKLRHYQVYNADVDR WVPLAEGSDARDNVYPVPLEMMP >Mature_662_residues TVRNFSLTLIACACLGAGWASAADKPLLQEGKKTLFQRVLTTPGCHMSAAAGGPAGAEQPPFSRFYVYEHANAGNAEWIK VGPDSFGKTSGWLPASCTVDWKMQLTLAFTNPANRDRLMFFKERKTLESILDAPDPVSLVAPLRAKLKQSAPAPGVLAQE PEYFIDMQKQFYLLPVLSGEEVMTEAGFRTRILNVASVSKADAALAAQQAQTGTTQGQNQGQAAANATSQLKEFSAAVVF VIDSTISMDPYIERTREAISKVYAQIAKENLGRQVKFGLVAFRSSTQAVPGLEYVTKMYADPNTVKDGADFLAKAADLKQ AKVSSKSFNEDSYAGVMQAIDKVDWSPFGARYVVLITDAGALDGDDKLSGTGLNAEQVRIEASNPGVAIYTLHLKTAAGA KDHANAEAQYQALSTYTGTNTSLYYPVDAGDLDAFGSKVDALASAITGQVKAAYMGDDAIGSALNSKAAPAEQKMLDDAA LIGHAMRLAYLGEKTGSQAPPVFQAWIADRDPIKQNVPTTDVRVLLTKSQLSDLSDVLKKILDAANEGLISPSEMFERLR SVAATMGTDPNQLKQDGTAKLSELGVLGEYLDDLPYHSEVLNLDEETWKSWDGLAQEKFIRTLSTKLRHYQVYNADVDRW VPLAEGSDARDNVYPVPLEMMP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 71587; Mature: 71456
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVRNFSLTLIACACLGAGWASAADKPLLQEGKKTLFQRVLTTPGCHMSAAAGGPAGAEQ CCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCC PPFSRFYVYEHANAGNAEWIKVGPDSFGKTSGWLPASCTVDWKMQLTLAFTNPANRDRLM CCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCEE FFKERKTLESILDAPDPVSLVAPLRAKLKQSAPAPGVLAQEPEYFIDMQKQFYLLPVLSG EEHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCEEEEEECCC EEVMTEAGFRTRILNVASVSKADAALAAQQAQTGTTQGQNQGQAAANATSQLKEFSAAVV HHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCEEE FVIDSTISMDPYIERTREAISKVYAQIAKENLGRQVKFGLVAFRSSTQAVPGLEYVTKMY EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHEEEECCCCCCCCCHHHHHHHH ADPNTVKDGADFLAKAADLKQAKVSSKSFNEDSYAGVMQAIDKVDWSPFGARYVVLITDA CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECC GALDGDDKLSGTGLNAEQVRIEASNPGVAIYTLHLKTAAGAKDHANAEAQYQALSTYTGT CCCCCCCCCCCCCCCHHEEEEEECCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHEECCC NTSLYYPVDAGDLDAFGSKVDALASAITGQVKAAYMGDDAIGSALNSKAAPAEQKMLDDA CCEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHCCCCCCHHHHHHHHH ALIGHAMRLAYLGEKTGSQAPPVFQAWIADRDPIKQNVPTTDVRVLLTKSQLSDLSDVLK HHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCHHCCCCCCCEEEEEEHHHHHHHHHHHH KILDAANEGLISPSEMFERLRSVAATMGTDPNQLKQDGTAKLSELGVLGEYLDDLPYHSE HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCHH VLNLDEETWKSWDGLAQEKFIRTLSTKLRHYQVYNADVDRWVPLAEGSDARDNVYPVPLE HHCCCHHHHHHHCCHHHHHHHHHHHHHHHHEEEECCCHHHEEECCCCCCCCCCEECCCCC MMP CCC >Mature Secondary Structure TVRNFSLTLIACACLGAGWASAADKPLLQEGKKTLFQRVLTTPGCHMSAAAGGPAGAEQ CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCC PPFSRFYVYEHANAGNAEWIKVGPDSFGKTSGWLPASCTVDWKMQLTLAFTNPANRDRLM CCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCEE FFKERKTLESILDAPDPVSLVAPLRAKLKQSAPAPGVLAQEPEYFIDMQKQFYLLPVLSG EEHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCEEEEEECCC EEVMTEAGFRTRILNVASVSKADAALAAQQAQTGTTQGQNQGQAAANATSQLKEFSAAVV HHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCEEE FVIDSTISMDPYIERTREAISKVYAQIAKENLGRQVKFGLVAFRSSTQAVPGLEYVTKMY EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHEEEECCCCCCCCCHHHHHHHH ADPNTVKDGADFLAKAADLKQAKVSSKSFNEDSYAGVMQAIDKVDWSPFGARYVVLITDA CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEECC GALDGDDKLSGTGLNAEQVRIEASNPGVAIYTLHLKTAAGAKDHANAEAQYQALSTYTGT CCCCCCCCCCCCCCCHHEEEEEECCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHEECCC NTSLYYPVDAGDLDAFGSKVDALASAITGQVKAAYMGDDAIGSALNSKAAPAEQKMLDDA CCEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHCCCCCCHHHHHHHHH ALIGHAMRLAYLGEKTGSQAPPVFQAWIADRDPIKQNVPTTDVRVLLTKSQLSDLSDVLK HHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCHHCCCCCCCEEEEEEHHHHHHHHHHHH KILDAANEGLISPSEMFERLRSVAATMGTDPNQLKQDGTAKLSELGVLGEYLDDLPYHSE HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCHH VLNLDEETWKSWDGLAQEKFIRTLSTKLRHYQVYNADVDRWVPLAEGSDARDNVYPVPLE HHCCCHHHHHHHCCHHHHHHHHHHHHHHHHEEEECCCHHHEEECCCCCCCCCCEECCCCC MMP CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA