| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045866
Identifier: 66045866
GI number: 66045866
Start: 3191012
End: 3192040
Strand: Reverse
Name: 66045866
Synonym: Psyr_2630
Alternate gene names: NA
Gene position: 3192040-3191012 (Counterclockwise)
Preceding gene: 66045867
Following gene: 66045865
Centisome position: 52.38
GC content: 59.48
Gene sequence:
>1029_bases ATGTCCATCACAATCAAACTCTCACCGCTGGCAAGTCCGGTTCCCGGCTGTGGCTTTCTCCAGGTACGTGGCTGGGAGCA TGATGCAGGCAATCTGGAATTTGCTATCCAGCGCAACCAGGACGACTACTACCTGCAGCACAACCAGCAATGGGCCAATG CGCCCTGCTGGTTCGCCCAGCATTTTGTGGAAGACGCTCAAGGCGATTCGATTAGCCATGAGGTAGGTCCGGATATTGTC GACCCACTTCTGCAGAATTCGGCAACCGGGGTATTCAATTTTCGTTTGCGCAACCCAGATGGCAGCGGCGAAGACGATAA TCCGATGAAGCTGATGGAAGGTCTGGCCCTGTCCGGCGCGGGTAGTGCTACTGGACCCGGCGCCGCGCAAACCACCGTCA GCCTCGCCGCGGCGTCACAAACAGTGCTTCCGGTAGCGGACCCTGCTTCGTCGCCATTGCCTGAACCAGCCGAGCCGGCA TTGCCGGACCCGGTTGTCGAGCCAGTCACTCCGACACCGGCGCCCGAGACCCAAAACCGCAAGGTATTGCTGCTGATTAT CGGTCTGGCATTGCTCGCTATCATCGCGGCGTGCCTGTGGTTCTGGCTCAAAAAAGCACCTGCCCCCGAGCCAGCGCCCG CCGTTGCGATGACAACTCCTGCGGTTGTGGCTCCCGCTGCCGCTGCGCCCTGCAGCGTAGAAGCGTTAAACAGCGAAAAC GAGTTGAGTTTTGTTCAAGGCTGCATCAAGCAGGCGCCTGATAGCGCAACCCTGTTGAACGTCATCGGTCTGGCCAAAAA CAACAAGCAGTGCGGTGTCGCCCAGCGCCTTTACGCGAATCGCGCCCAGGCCGGCAACGTCGAAGTGGCCCAGGCCTATG CGCGGGAGTACGACCCTAAATACCTGCAACCCAGCGCTTGTTTCACCGCCCCTGACAACGCCACTGCCGCTTACTGGTAC GAAACCATTCTGGGCTATCAGGCAGACAACGCAGAAGCCGCTCAGCGCCTGAAGGAGCTCAAGCCGTGA
Upstream 100 bases:
>100_bases TACCCAGAAAAACGTCGGTCACCGCAAAGGCAAAGAAATAACTCCTGAGCAAAACGAGGCCATGGGCCGCGTTATCCAGG CGTTCAAAGCGAGATAATTC
Downstream 100 bases:
>100_bases CAGTGCGCAATTTTTCACTGACCCTCATAGCCTGCGCGTGCCTGGGGGCCGGCTGGGCCTCGGCGGCCGACAAACCGTTG TTGCAGGAAGGTAAAAAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MSITIKLSPLASPVPGCGFLQVRGWEHDAGNLEFAIQRNQDDYYLQHNQQWANAPCWFAQHFVEDAQGDSISHEVGPDIV DPLLQNSATGVFNFRLRNPDGSGEDDNPMKLMEGLALSGAGSATGPGAAQTTVSLAAASQTVLPVADPASSPLPEPAEPA LPDPVVEPVTPTPAPETQNRKVLLLIIGLALLAIIAACLWFWLKKAPAPEPAPAVAMTTPAVVAPAAAAPCSVEALNSEN ELSFVQGCIKQAPDSATLLNVIGLAKNNKQCGVAQRLYANRAQAGNVEVAQAYAREYDPKYLQPSACFTAPDNATAAYWY ETILGYQADNAEAAQRLKELKP
Sequences:
>Translated_342_residues MSITIKLSPLASPVPGCGFLQVRGWEHDAGNLEFAIQRNQDDYYLQHNQQWANAPCWFAQHFVEDAQGDSISHEVGPDIV DPLLQNSATGVFNFRLRNPDGSGEDDNPMKLMEGLALSGAGSATGPGAAQTTVSLAAASQTVLPVADPASSPLPEPAEPA LPDPVVEPVTPTPAPETQNRKVLLLIIGLALLAIIAACLWFWLKKAPAPEPAPAVAMTTPAVVAPAAAAPCSVEALNSEN ELSFVQGCIKQAPDSATLLNVIGLAKNNKQCGVAQRLYANRAQAGNVEVAQAYAREYDPKYLQPSACFTAPDNATAAYWY ETILGYQADNAEAAQRLKELKP >Mature_341_residues SITIKLSPLASPVPGCGFLQVRGWEHDAGNLEFAIQRNQDDYYLQHNQQWANAPCWFAQHFVEDAQGDSISHEVGPDIVD PLLQNSATGVFNFRLRNPDGSGEDDNPMKLMEGLALSGAGSATGPGAAQTTVSLAAASQTVLPVADPASSPLPEPAEPAL PDPVVEPVTPTPAPETQNRKVLLLIIGLALLAIIAACLWFWLKKAPAPEPAPAVAMTTPAVVAPAAAAPCSVEALNSENE LSFVQGCIKQAPDSATLLNVIGLAKNNKQCGVAQRLYANRAQAGNVEVAQAYAREYDPKYLQPSACFTAPDNATAAYWYE TILGYQADNAEAAQRLKELKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36262; Mature: 36131
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSITIKLSPLASPVPGCGFLQVRGWEHDAGNLEFAIQRNQDDYYLQHNQQWANAPCWFAQ CEEEEEECCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCEEEECCCCCCCCCHHHHH HFVEDAQGDSISHEVGPDIVDPLLQNSATGVFNFRLRNPDGSGEDDNPMKLMEGLALSGA HHHHHCCCCCCCHHCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCC GSATGPGAAQTTVSLAAASQTVLPVADPASSPLPEPAEPALPDPVVEPVTPTPAPETQNR CCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KVLLLIIGLALLAIIAACLWFWLKKAPAPEPAPAVAMTTPAVVAPAAAAPCSVEALNSEN EEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHCCCCCCCCCCEECCCCC ELSFVQGCIKQAPDSATLLNVIGLAKNNKQCGVAQRLYANRAQAGNVEVAQAYAREYDPK HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCC YLQPSACFTAPDNATAAYWYETILGYQADNAEAAQRLKELKP CCCCCCCEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCC >Mature Secondary Structure SITIKLSPLASPVPGCGFLQVRGWEHDAGNLEFAIQRNQDDYYLQHNQQWANAPCWFAQ EEEEEECCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCEEEECCCCCCCCCHHHHH HFVEDAQGDSISHEVGPDIVDPLLQNSATGVFNFRLRNPDGSGEDDNPMKLMEGLALSGA HHHHHCCCCCCCHHCCHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCCCC GSATGPGAAQTTVSLAAASQTVLPVADPASSPLPEPAEPALPDPVVEPVTPTPAPETQNR CCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KVLLLIIGLALLAIIAACLWFWLKKAPAPEPAPAVAMTTPAVVAPAAAAPCSVEALNSEN EEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHCCCCCCCCCCEECCCCC ELSFVQGCIKQAPDSATLLNVIGLAKNNKQCGVAQRLYANRAQAGNVEVAQAYAREYDPK HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCCC YLQPSACFTAPDNATAAYWYETILGYQADNAEAAQRLKELKP CCCCCCCEECCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA