Click here to switch to the map view.

The map label for this gene is 66045843

Identifier: 66045843

GI number: 66045843

Start: 3061640

End: 3062470

Strand: Reverse

Name: 66045843

Synonym: Psyr_2607

Alternate gene names: NA

Gene position: 3062470-3061640 (Counterclockwise)

Preceding gene: 66045844

Following gene: 66045842

Centisome position: 50.26

GC content: 55.11

Gene sequence:

>831_bases
ATGAACCGACAAGTGAATGCCAAAGATGAAGTGAAAACGCACATTTATCTGGAACTCGGGAAGCTGGTGTCTAGCGTCGG
AGATGACATGTTTCTGAGCAACATGTACCAGTTAATCAATACATCGCTGGCTGTAAGCCGTGTGGAACTGAGCGAGTGGA
CCGTTGATGACAGTCAGGCGACGGTGACCGATGTACAGCTGCTGGGCTACGCGGGCGCTGAGTTGAATCCGCAGATGCAA
ACGGTGTGTCCGACCCGTGCCAGACACCGCAGCGACCATCCACTGGTCAAGCGCGTGCTGGAGGTAGAGGACGACCTGCT
GATTCACCTGAACGCCCGGATGAAAAACCAGCAAGGCAATGACTGTCTCGGAACCTCCCACCAGTGCAGCATGATTTCGC
GCAAGGCCAATCGCTGTTGTGTGATCTCACTGCACCGTCCGCAAGCTGACAAAGATTACTCGTTGCAAGAGCTGTCTTTT
TTGAAATACCTCTCGGAGGCCCTGTTGCCTTTGTCGGAACGGCATGCCCGCGTACATCGCCAATCCGGTATGAAAAACGC
TGGTGGCATGCTGTCTCACGGCTCGGTTCCCATTGAGTACAAGTACCTGCAACGCGAGTTCAACGAACGCTTGCTTGCCT
GCGACGTCTCGCTATCGGCACGCGAGAAGGAGGCCTGTCTGGAATTCCTCGCGGGCGGCACAGTCCCTGAGATCGCCGAA
AAACTCTGCGTCAAGAGCAGTTCCATCGAAACCTACCTGAAACGTTCCGCCGCCAAGCTGGGCATCAGCGGTCGACATGG
ACTGGCCAAATGGATGATAGGCGCAGAATGA

Upstream 100 bases:

>100_bases
TAGTGATGTTAAGGCGCGAAGGATTTGAGCGTCCTGAGGGCGGAATTCACAGTCTGGTCGACAGAATTGCACGCAACTTC
TGATCTTCAGGAATGGACAT

Downstream 100 bases:

>100_bases
ACAGATCAATTGGCCCCTGGCTGTTTACGGCACTGTCCTTGAGCGGCTGCTCGTTGATTCCGGACTATCAGCGCCCGGCG
GCACCGGTTGCCGCGCACTA

Product: regulatory protein, LuxR

Products: NA

Alternate protein names: Regulatory Protein LuxR; LuxR Family Regulatory Protein; Transcriptional Regulator LuxR Family Protein; Transcriptional Regulator LuxR Family; Transcriptional Regulator SyrR

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MNRQVNAKDEVKTHIYLELGKLVSSVGDDMFLSNMYQLINTSLAVSRVELSEWTVDDSQATVTDVQLLGYAGAELNPQMQ
TVCPTRARHRSDHPLVKRVLEVEDDLLIHLNARMKNQQGNDCLGTSHQCSMISRKANRCCVISLHRPQADKDYSLQELSF
LKYLSEALLPLSERHARVHRQSGMKNAGGMLSHGSVPIEYKYLQREFNERLLACDVSLSAREKEACLEFLAGGTVPEIAE
KLCVKSSSIETYLKRSAAKLGISGRHGLAKWMIGAE

Sequences:

>Translated_276_residues
MNRQVNAKDEVKTHIYLELGKLVSSVGDDMFLSNMYQLINTSLAVSRVELSEWTVDDSQATVTDVQLLGYAGAELNPQMQ
TVCPTRARHRSDHPLVKRVLEVEDDLLIHLNARMKNQQGNDCLGTSHQCSMISRKANRCCVISLHRPQADKDYSLQELSF
LKYLSEALLPLSERHARVHRQSGMKNAGGMLSHGSVPIEYKYLQREFNERLLACDVSLSAREKEACLEFLAGGTVPEIAE
KLCVKSSSIETYLKRSAAKLGISGRHGLAKWMIGAE
>Mature_276_residues
MNRQVNAKDEVKTHIYLELGKLVSSVGDDMFLSNMYQLINTSLAVSRVELSEWTVDDSQATVTDVQLLGYAGAELNPQMQ
TVCPTRARHRSDHPLVKRVLEVEDDLLIHLNARMKNQQGNDCLGTSHQCSMISRKANRCCVISLHRPQADKDYSLQELSF
LKYLSEALLPLSERHARVHRQSGMKNAGGMLSHGSVPIEYKYLQREFNERLLACDVSLSAREKEACLEFLAGGTVPEIAE
KLCVKSSSIETYLKRSAAKLGISGRHGLAKWMIGAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30860; Mature: 30860

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: PS00622 HTH_LUXR_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRQVNAKDEVKTHIYLELGKLVSSVGDDMFLSNMYQLINTSLAVSRVELSEWTVDDSQA
CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEHHHEECCCCCC
TVTDVQLLGYAGAELNPQMQTVCPTRARHRSDHPLVKRVLEVEDDLLIHLNARMKNQQGN
HHHHHHHHHCCCCCCCCCHHHHCCHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCC
DCLGTSHQCSMISRKANRCCVISLHRPQADKDYSLQELSFLKYLSEALLPLSERHARVHR
CCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
QSGMKNAGGMLSHGSVPIEYKYLQREFNERLLACDVSLSAREKEACLEFLAGGTVPEIAE
HCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHH
KLCVKSSSIETYLKRSAAKLGISGRHGLAKWMIGAE
HHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCC
>Mature Secondary Structure
MNRQVNAKDEVKTHIYLELGKLVSSVGDDMFLSNMYQLINTSLAVSRVELSEWTVDDSQA
CCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEHHHEECCCCCC
TVTDVQLLGYAGAELNPQMQTVCPTRARHRSDHPLVKRVLEVEDDLLIHLNARMKNQQGN
HHHHHHHHHCCCCCCCCCHHHHCCHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCC
DCLGTSHQCSMISRKANRCCVISLHRPQADKDYSLQELSFLKYLSEALLPLSERHARVHR
CCCCCCHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
QSGMKNAGGMLSHGSVPIEYKYLQREFNERLLACDVSLSAREKEACLEFLAGGTVPEIAE
HCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHH
KLCVKSSSIETYLKRSAAKLGISGRHGLAKWMIGAE
HHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA