| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is cbrB [H]
Identifier: 66045827
GI number: 66045827
Start: 3037694
End: 3038683
Strand: Direct
Name: cbrB [H]
Synonym: Psyr_2591
Alternate gene names: 66045827
Gene position: 3037694-3038683 (Clockwise)
Preceding gene: 66045826
Following gene: 66045828
Centisome position: 49.85
GC content: 64.34
Gene sequence:
>990_bases ATGACGGCTGCGGCAAAACTGGGCCTGGGGCTGTTGATACTGGTAGCGTGCATGGGATTGAGTCTGGCCACTGGGGCCAC CTGGATATCGCCCGCTGACATCGTGCGGAGTGTCTGGCAGCCGGATGCGCTGAGCGCTATCGAGCACGTGCTGCTCGACA CACGGCTGACACGTACCCTGATGGCCGTCGCAGTAGGCTCGAGTCTGGCGGTTGCCGGGGCACTGATGCAGGCGCTGACG CGCAATCCGCTGGCGTCGCCTGGCCTGTTTGGCATCAATGCCGGCGCGACGTTTGCCATCATCGCCTGTTCGTCGCTGCT TACACTGTCGTCCATGAGTCAGTGGCTGTGGTGCGCGTTCATCGGCGCTGCGGTGGCGGGCACGATTGTCTGGGTCATCG GCAACCGGGGGCAGGGCAGCCTCAATCCATTGCGCATCGTATTGGCCGGCGCAGCGATCACCGCCTTGTTCACCGCGTTC AGCCAGGCCTTGCTGGTGGTCAATCAGGACGGTCTGGACACTGTGCTGTTCTGGCTGGCCGGTTCCTTGTCGGAGCGCGA ACTGAGCACCGCTGCGCCGTTGCTCGTCTGCGTGGTCATGGGGCTTGCCGGCGCGCTGGTGCTGGCGGGGCAAGTCAACG TGCTCAACACCGGGGAAGCCATCGCGACGGCGCTGGGCCAGCGTACGGGGCTGATTCGCCTGATGATGAGCGTGGTAATC ATTGCCCTGGCAGGCAGCGCCGTGGCGCTGGCGGGCAGTATCGGCTTCATAGGTCTGCTGGTGCCACATATGGTGCGCAA GACGCTGTCCATCGACCATCGCTGGCTGCTGCCTGGCTGCGCAGTGCTGGGCGCGACGCTGTTGTTGCTGGCCGACACGC TGGCGCGAGTCGTGATCGTCCCTCAGGAAGTCCCGGTGGGTGTGATGACGGCTCTGTTTGGTGCGCCGTTCTTCATTGCA CTGGTTCGGCGGGGCACGCGCTATGGATAA
Upstream 100 bases:
>100_bases GGCGCGTCGATGCCATCGCCTGGAGCCTGTCCGGCGGCATTCTGGGCGCCAACCGCATGCTCGATGAGGTCGCTCGCGTG GCCCTGGCGGATAGCGCCTC
Downstream 100 bases:
>100_bases GCATTTCACCGTGCGCTACCGGAGCTTTTCCCGGCAGTTCAGCCTGACCGCATTGACGCGCTTGCTTTCGGGCCTGGCGC TGACGCTGCTGGTCGTACTG
Product: transport system permease protein
Products: ADP; phosphate; ferric enterobactin [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MTAAAKLGLGLLILVACMGLSLATGATWISPADIVRSVWQPDALSAIEHVLLDTRLTRTLMAVAVGSSLAVAGALMQALT RNPLASPGLFGINAGATFAIIACSSLLTLSSMSQWLWCAFIGAAVAGTIVWVIGNRGQGSLNPLRIVLAGAAITALFTAF SQALLVVNQDGLDTVLFWLAGSLSERELSTAAPLLVCVVMGLAGALVLAGQVNVLNTGEAIATALGQRTGLIRLMMSVVI IALAGSAVALAGSIGFIGLLVPHMVRKTLSIDHRWLLPGCAVLGATLLLLADTLARVVIVPQEVPVGVMTALFGAPFFIA LVRRGTRYG
Sequences:
>Translated_329_residues MTAAAKLGLGLLILVACMGLSLATGATWISPADIVRSVWQPDALSAIEHVLLDTRLTRTLMAVAVGSSLAVAGALMQALT RNPLASPGLFGINAGATFAIIACSSLLTLSSMSQWLWCAFIGAAVAGTIVWVIGNRGQGSLNPLRIVLAGAAITALFTAF SQALLVVNQDGLDTVLFWLAGSLSERELSTAAPLLVCVVMGLAGALVLAGQVNVLNTGEAIATALGQRTGLIRLMMSVVI IALAGSAVALAGSIGFIGLLVPHMVRKTLSIDHRWLLPGCAVLGATLLLLADTLARVVIVPQEVPVGVMTALFGAPFFIA LVRRGTRYG >Mature_328_residues TAAAKLGLGLLILVACMGLSLATGATWISPADIVRSVWQPDALSAIEHVLLDTRLTRTLMAVAVGSSLAVAGALMQALTR NPLASPGLFGINAGATFAIIACSSLLTLSSMSQWLWCAFIGAAVAGTIVWVIGNRGQGSLNPLRIVLAGAAITALFTAFS QALLVVNQDGLDTVLFWLAGSLSERELSTAAPLLVCVVMGLAGALVLAGQVNVLNTGEAIATALGQRTGLIRLMMSVVII ALAGSAVALAGSIGFIGLLVPHMVRKTLSIDHRWLLPGCAVLGATLLLLADTLARVVIVPQEVPVGVMTALFGAPFFIAL VRRGTRYG
Specific function: Part of the binding-protein-dependent transport system CbrABCD for uptake of the siderophore achromobactin. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786805, Length=299, Percent_Identity=45.4849498327759, Blast_Score=203, Evalue=1e-53, Organism=Escherichia coli, GI1790741, Length=302, Percent_Identity=38.0794701986755, Blast_Score=153, Evalue=2e-38, Organism=Escherichia coli, GI1790740, Length=317, Percent_Identity=35.6466876971609, Blast_Score=142, Evalue=3e-35, Organism=Escherichia coli, GI1788004, Length=306, Percent_Identity=36.2745098039216, Blast_Score=123, Evalue=2e-29, Organism=Escherichia coli, GI1786804, Length=293, Percent_Identity=34.4709897610922, Blast_Score=108, Evalue=7e-25, Organism=Escherichia coli, GI1786347, Length=285, Percent_Identity=30.1754385964912, Blast_Score=106, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 33812; Mature: 33681
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAAKLGLGLLILVACMGLSLATGATWISPADIVRSVWQPDALSAIEHVLLDTRLTRTL CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH MAVAVGSSLAVAGALMQALTRNPLASPGLFGINAGATFAIIACSSLLTLSSMSQWLWCAF HHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH IGAAVAGTIVWVIGNRGQGSLNPLRIVLAGAAITALFTAFSQALLVVNQDGLDTVLFWLA HHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHH GSLSERELSTAAPLLVCVVMGLAGALVLAGQVNVLNTGEAIATALGQRTGLIRLMMSVVI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHH IALAGSAVALAGSIGFIGLLVPHMVRKTLSIDHRWLLPGCAVLGATLLLLADTLARVVIV HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEC PQEVPVGVMTALFGAPFFIALVRRGTRYG CCCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TAAAKLGLGLLILVACMGLSLATGATWISPADIVRSVWQPDALSAIEHVLLDTRLTRTL CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH MAVAVGSSLAVAGALMQALTRNPLASPGLFGINAGATFAIIACSSLLTLSSMSQWLWCAF HHHHHCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH IGAAVAGTIVWVIGNRGQGSLNPLRIVLAGAAITALFTAFSQALLVVNQDGLDTVLFWLA HHHHHHHEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHH GSLSERELSTAAPLLVCVVMGLAGALVLAGQVNVLNTGEAIATALGQRTGLIRLMMSVVI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHH IALAGSAVALAGSIGFIGLLVPHMVRKTLSIDHRWLLPGCAVLGATLLLLADTLARVVIV HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEC PQEVPVGVMTALFGAPFFIALVRRGTRYG CCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; ferric enterobactin [Periplasm]; H2O [C]
Specific reaction: ATP + ferric enterobactin [Periplasm] + H2O = ADP + phosphate + ferric enterobactin [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8596459 [H]