| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is cbrC [H]
Identifier: 66045828
GI number: 66045828
Start: 3038676
End: 3039707
Strand: Direct
Name: cbrC [H]
Synonym: Psyr_2592
Alternate gene names: 66045828
Gene position: 3038676-3039707 (Clockwise)
Preceding gene: 66045827
Following gene: 66045829
Centisome position: 49.87
GC content: 63.76
Gene sequence:
>1032_bases ATGGATAAGCATTTCACCGTGCGCTACCGGAGCTTTTCCCGGCAGTTCAGCCTGACCGCATTGACGCGCTTGCTTTCGGG CCTGGCGCTGACGCTGCTGGTCGTACTGAGCTCGTTGGCCGTGGGCAAGATCAATCTGTCGCCCGCGACCCTGCTGAGTG TTTTTACCGGTCAGGCAGATGCCAGCCTGGTCTTCATCGTCGAACAGCTGCGCATGCCCCGGCTGGCCCTGGCCGCCCTG GTCGGCGCAGCACTGGCAGTGTCCGGGCTGATCCTGCAAAGCATCATTCGCAACCCGCTGGCCTCACCTGATCTGTTAGG CATCACCAGCGGTGCCAGCGCCGCCGCCGTGTTGTACCTGTCATTCTTCTCGGCTGCACTGGGCGCGCAGTTTCTACCCC TGGCGGCGATCTCCGGCGCAGGCCTCGCGGCACTGGTCATTTATCTGCTGGCCTGGAATCAGGGCGCTTCACCCTTGCGC ATGGTGTTGATCGGGGTAGGGGTGTCGGCTCTGCTGGCTGCGGTGACCACGTTCATTCTGGTGTTCAGCCCGTTGACCAC CACCTTGTCGGCTTATGTCTGGCTGACCGGGAGCGTGTATGGTGCCAGTTGGCCAGAGCCCCGCGCGCTGGCCGGCTGGC TGCTTATGACATTGCCGCTGCTGGCACTGCTCGCCCGTCAGGTGCGCATGCAGCAACTGGATGACGCGCTGGCCCAGGGA ATCGGCGTGCGCGTGCAATGGCTGCGCGCCGGTTTGCTGTTGGTGAGCGTCGCGCTGGCCGGGCTGGCGGTCGCGTGGGG CGGGGCGATTGCCTTTGTCGGGCTGATCGCGCCTCATATCGCCAAACGCCTGATGCCGCCGGGGTTCGTGGGGCAAGCGC TGATGGCGGCGTTGATCGGTGCCAATCTGGTGATGCTTGCCGATCTGGCCGGACGCACGCTGTTCCTGCCGCTGGATCTG CCCGCAGGGATTTTTGTCGCGGTGCTGGGCACACCGTTTTTTCTGTACCTATTGATCAACCAGCGGCATTAA
Upstream 100 bases:
>100_bases GCGCGAGTCGTGATCGTCCCTCAGGAAGTCCCGGTGGGTGTGATGACGGCTCTGTTTGGTGCGCCGTTCTTCATTGCACT GGTTCGGCGGGGCACGCGCT
Downstream 100 bases:
>100_bases GGAATTACGGATGGCGTCAATCGCAACCCACGACCTGACCCTGAGTTACCAGCGGCAGGTGATCATCGACAGCCTTGATC TGCAGTTACCCGCAGGCCAG
Product: transport system permease protein
Products: ADP; phosphate; ferric enterobactin [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MDKHFTVRYRSFSRQFSLTALTRLLSGLALTLLVVLSSLAVGKINLSPATLLSVFTGQADASLVFIVEQLRMPRLALAAL VGAALAVSGLILQSIIRNPLASPDLLGITSGASAAAVLYLSFFSAALGAQFLPLAAISGAGLAALVIYLLAWNQGASPLR MVLIGVGVSALLAAVTTFILVFSPLTTTLSAYVWLTGSVYGASWPEPRALAGWLLMTLPLLALLARQVRMQQLDDALAQG IGVRVQWLRAGLLLVSVALAGLAVAWGGAIAFVGLIAPHIAKRLMPPGFVGQALMAALIGANLVMLADLAGRTLFLPLDL PAGIFVAVLGTPFFLYLLINQRH
Sequences:
>Translated_343_residues MDKHFTVRYRSFSRQFSLTALTRLLSGLALTLLVVLSSLAVGKINLSPATLLSVFTGQADASLVFIVEQLRMPRLALAAL VGAALAVSGLILQSIIRNPLASPDLLGITSGASAAAVLYLSFFSAALGAQFLPLAAISGAGLAALVIYLLAWNQGASPLR MVLIGVGVSALLAAVTTFILVFSPLTTTLSAYVWLTGSVYGASWPEPRALAGWLLMTLPLLALLARQVRMQQLDDALAQG IGVRVQWLRAGLLLVSVALAGLAVAWGGAIAFVGLIAPHIAKRLMPPGFVGQALMAALIGANLVMLADLAGRTLFLPLDL PAGIFVAVLGTPFFLYLLINQRH >Mature_343_residues MDKHFTVRYRSFSRQFSLTALTRLLSGLALTLLVVLSSLAVGKINLSPATLLSVFTGQADASLVFIVEQLRMPRLALAAL VGAALAVSGLILQSIIRNPLASPDLLGITSGASAAAVLYLSFFSAALGAQFLPLAAISGAGLAALVIYLLAWNQGASPLR MVLIGVGVSALLAAVTTFILVFSPLTTTLSAYVWLTGSVYGASWPEPRALAGWLLMTLPLLALLARQVRMQQLDDALAQG IGVRVQWLRAGLLLVSVALAGLAVAWGGAIAFVGLIAPHIAKRLMPPGFVGQALMAALIGANLVMLADLAGRTLFLPLDL PAGIFVAVLGTPFFLYLLINQRH
Specific function: Part of the binding-protein-dependent transport system CbrABCD for uptake of the siderophore achromobactin. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786804, Length=302, Percent_Identity=37.0860927152318, Blast_Score=156, Evalue=2e-39, Organism=Escherichia coli, GI1790740, Length=313, Percent_Identity=36.1022364217252, Blast_Score=151, Evalue=7e-38, Organism=Escherichia coli, GI1790741, Length=277, Percent_Identity=32.8519855595668, Blast_Score=114, Evalue=9e-27, Organism=Escherichia coli, GI1786347, Length=280, Percent_Identity=33.5714285714286, Blast_Score=108, Evalue=7e-25, Organism=Escherichia coli, GI1788004, Length=285, Percent_Identity=32.6315789473684, Blast_Score=99, Evalue=4e-22, Organism=Escherichia coli, GI1786805, Length=313, Percent_Identity=30.9904153354633, Blast_Score=90, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 35886; Mature: 35886
Theoretical pI: Translated: 11.33; Mature: 11.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKHFTVRYRSFSRQFSLTALTRLLSGLALTLLVVLSSLAVGKINLSPATLLSVFTGQAD CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC ASLVFIVEQLRMPRLALAALVGAALAVSGLILQSIIRNPLASPDLLGITSGASAAAVLYL CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHH SFFSAALGAQFLPLAAISGAGLAALVIYLLAWNQGASPLRMVLIGVGVSALLAAVTTFIL HHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHH VFSPLTTTLSAYVWLTGSVYGASWPEPRALAGWLLMTLPLLALLARQVRMQQLDDALAQG HHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IGVRVQWLRAGLLLVSVALAGLAVAWGGAIAFVGLIAPHIAKRLMPPGFVGQALMAALIG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH ANLVMLADLAGRTLFLPLDLPAGIFVAVLGTPFFLYLLINQRH CHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDKHFTVRYRSFSRQFSLTALTRLLSGLALTLLVVLSSLAVGKINLSPATLLSVFTGQAD CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC ASLVFIVEQLRMPRLALAALVGAALAVSGLILQSIIRNPLASPDLLGITSGASAAAVLYL CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHH SFFSAALGAQFLPLAAISGAGLAALVIYLLAWNQGASPLRMVLIGVGVSALLAAVTTFIL HHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHHHHHH VFSPLTTTLSAYVWLTGSVYGASWPEPRALAGWLLMTLPLLALLARQVRMQQLDDALAQG HHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IGVRVQWLRAGLLLVSVALAGLAVAWGGAIAFVGLIAPHIAKRLMPPGFVGQALMAALIG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH ANLVMLADLAGRTLFLPLDLPAGIFVAVLGTPFFLYLLINQRH CHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; ferric enterobactin [Periplasm]; H2O [C]
Specific reaction: ATP + ferric enterobactin [Periplasm] + H2O = ADP + phosphate + ferric enterobactin [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8596459 [H]