| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is rhbC [H]
Identifier: 66045820
GI number: 66045820
Start: 3027873
End: 3029657
Strand: Direct
Name: rhbC [H]
Synonym: Psyr_2584
Alternate gene names: 66045820
Gene position: 3027873-3029657 (Clockwise)
Preceding gene: 66045819
Following gene: 66045821
Centisome position: 49.69
GC content: 61.57
Gene sequence:
>1785_bases ATGACTAATACCGATCGCACCGTCTTATCAAACATGGTGAGCGAGTTGGCAACCACTCGCGCGTTACTCAATTGCCTGAT CAAGGAATTCGCACTGCCGGAAGAGTGCCTGCATTACACCTGGCCGGAAGGCATGCAAGGCATAGCGCCTGGCAGTTTCG TGGATGGCGGGCAATGGAAGGGCATTCCGCTCACCATCAGCCTGCCCAATCAGCAACAGTTCTTCGTCCTGGTGGACCGC CGCGACCACCTGGGCAGCCATCGCTACCTTTCCGATGTCTACGCACGTCAGGGGCAGGGCACCTGGCGCTGCCTGGCGTT TGCCGAATTCGCCCGGCAACTGCTGACCGCCTGTGAGCACATGACCCGTGCCAGCAATGACGAACTGCTGGACCAGGTCC TGCAAAGCCAGCACCTGACTGCCGCCATCGTTGCCCACAACATGACCGGCCAGCACCCGGCGCCGCTCAGCGGCTATCTG GCCAGTGAGCAGGGTTTGTGGTTCGGCCACCCCAATCACCCGGCGCCCAAGGCGCGCCTGTGGCCTGAGCATCTGGCGCA GGAGACCTACGCCCCGGAGTTTCAGGCGCAGACCGCGCTGCACCTGTTCGAAGTGCCGCTGGAAGGGCTGCGAATCACCT CCAATGGCTTGAGCGAAGCCGAGGTGATGTCAGGCTTCGCTGATCAATCGCGGGCCCGACCCGGGCACGCGCTGATCTGC ATGCATCCGGTACAGGCGCAATTGTTCATGCAGGACCGTCGCGTGCAACGTCTGCTTGAGTTGGGGGACATCTCCGATCT GGGTGCCAGTGGCTTGCTGGCCAGCCCGACGGCGTCGATGCGCACTTGGTACATCGAGGGTCACGACTACTTCATCAAGG GCTCGCTGAATGTACGCATCACCAACTGCGTGAGGAAAAACGCGTGGTATGAACTGGAAAGCACGTTGATCATCGACGAG CTGTTTCAGCGCCTGCAGCAGACCCGCCCGGAAACCCTCGGCGGGCTGTCCACAGTCGCTGAACCCGGCTCGATGAGCTG GGCTCCCAAAGGCGTGAGCGAGGCGGATGGTCACTGGTTTCGCGAGCAGACCGGCGCCATTCTGCGGGAAAACTTCTGCC GCCGCTCCGGCGAAGATTGCAGCGTGATGGCGGGCACACTGTTCGCCCGTGATCTGCGCTCACGCCCATTGGTGCACGAC TTCCTCCAGCGTTTCAATGGCGCAGAGCTCGAGGACCAGCACCTGCTGGACTGGTTCGATGAGTATCAGGCCTTGCTGCT GAGCCCGGTCATGGCGTTGTTCTTCAATCATGGCATCGTGATGGAGCCGCATTTGCAGAATGCGGTGCTGATTCACGACA ACGGACGCCCGCAACAACTGCTGTTGCGCGACTTTGAAGGCGTCAAGCTCACCGAAGAGCTGGGCATCAAGGCGATTCAG GTGGGGCTGCACCCGAGAATTCGCCAGTCGTTGCTCTACAGCCGCGAACAGGGCTGGAACCGCATTACCTATTGCCTGCT GATCAACAACCTGTCCGAGGCGGTACTGGCCTTGAGCTGGGAGCGCCCGCACCTGGCACCACTGATGTGGCAGCGCGTCG AGCGGCAATTGCAGCGTATCCGCGACGAACTGGTGCTGCCTGCGCCCGAGCTGGACGCGCTGATCGCAGGCCAGTCGATT GCCTGCAAGACCAACCTCAAGGTCCGGCTCGCCGCCAAGGCCGATCGCGAAGCCAACTATGTGCGTCTTGCGTCGCCGTG GGCCACGGAGGCACGTTATGCATAA
Upstream 100 bases:
>100_bases ATCGCACCTCGACAGCTCGACTGTTGTGCCGCAAGCGATAAATCAACGTTTGTTGCGACGTCATTTAAACGGTCAGCGTA AAGGCGACTGTGGAGCAGAC
Downstream 100 bases:
>100_bases GGTGCCGGAGACCGTACTGGCGGCCATCAAGGAGGCTCGGGCGCTGGAAACCGACCCGCTGGCGGCCTTCTTCTACGATC TGGACGCGTTGCAGCAGCAT
Product: IucA/IucC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 594; Mature: 593
Protein sequence:
>594_residues MTNTDRTVLSNMVSELATTRALLNCLIKEFALPEECLHYTWPEGMQGIAPGSFVDGGQWKGIPLTISLPNQQQFFVLVDR RDHLGSHRYLSDVYARQGQGTWRCLAFAEFARQLLTACEHMTRASNDELLDQVLQSQHLTAAIVAHNMTGQHPAPLSGYL ASEQGLWFGHPNHPAPKARLWPEHLAQETYAPEFQAQTALHLFEVPLEGLRITSNGLSEAEVMSGFADQSRARPGHALIC MHPVQAQLFMQDRRVQRLLELGDISDLGASGLLASPTASMRTWYIEGHDYFIKGSLNVRITNCVRKNAWYELESTLIIDE LFQRLQQTRPETLGGLSTVAEPGSMSWAPKGVSEADGHWFREQTGAILRENFCRRSGEDCSVMAGTLFARDLRSRPLVHD FLQRFNGAELEDQHLLDWFDEYQALLLSPVMALFFNHGIVMEPHLQNAVLIHDNGRPQQLLLRDFEGVKLTEELGIKAIQ VGLHPRIRQSLLYSREQGWNRITYCLLINNLSEAVLALSWERPHLAPLMWQRVERQLQRIRDELVLPAPELDALIAGQSI ACKTNLKVRLAAKADREANYVRLASPWATEARYA
Sequences:
>Translated_594_residues MTNTDRTVLSNMVSELATTRALLNCLIKEFALPEECLHYTWPEGMQGIAPGSFVDGGQWKGIPLTISLPNQQQFFVLVDR RDHLGSHRYLSDVYARQGQGTWRCLAFAEFARQLLTACEHMTRASNDELLDQVLQSQHLTAAIVAHNMTGQHPAPLSGYL ASEQGLWFGHPNHPAPKARLWPEHLAQETYAPEFQAQTALHLFEVPLEGLRITSNGLSEAEVMSGFADQSRARPGHALIC MHPVQAQLFMQDRRVQRLLELGDISDLGASGLLASPTASMRTWYIEGHDYFIKGSLNVRITNCVRKNAWYELESTLIIDE LFQRLQQTRPETLGGLSTVAEPGSMSWAPKGVSEADGHWFREQTGAILRENFCRRSGEDCSVMAGTLFARDLRSRPLVHD FLQRFNGAELEDQHLLDWFDEYQALLLSPVMALFFNHGIVMEPHLQNAVLIHDNGRPQQLLLRDFEGVKLTEELGIKAIQ VGLHPRIRQSLLYSREQGWNRITYCLLINNLSEAVLALSWERPHLAPLMWQRVERQLQRIRDELVLPAPELDALIAGQSI ACKTNLKVRLAAKADREANYVRLASPWATEARYA >Mature_593_residues TNTDRTVLSNMVSELATTRALLNCLIKEFALPEECLHYTWPEGMQGIAPGSFVDGGQWKGIPLTISLPNQQQFFVLVDRR DHLGSHRYLSDVYARQGQGTWRCLAFAEFARQLLTACEHMTRASNDELLDQVLQSQHLTAAIVAHNMTGQHPAPLSGYLA SEQGLWFGHPNHPAPKARLWPEHLAQETYAPEFQAQTALHLFEVPLEGLRITSNGLSEAEVMSGFADQSRARPGHALICM HPVQAQLFMQDRRVQRLLELGDISDLGASGLLASPTASMRTWYIEGHDYFIKGSLNVRITNCVRKNAWYELESTLIIDEL FQRLQQTRPETLGGLSTVAEPGSMSWAPKGVSEADGHWFREQTGAILRENFCRRSGEDCSVMAGTLFARDLRSRPLVHDF LQRFNGAELEDQHLLDWFDEYQALLLSPVMALFFNHGIVMEPHLQNAVLIHDNGRPQQLLLRDFEGVKLTEELGIKAIQV GLHPRIRQSLLYSREQGWNRITYCLLINNLSEAVLALSWERPHLAPLMWQRVERQLQRIRDELVLPAPELDALIAGQSIA CKTNLKVRLAAKADREANYVRLASPWATEARYA
Specific function: Unknown
COG id: COG4264
COG function: function code Q; Siderophore synthetase component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iucA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007310 - InterPro: IPR022770 [H]
Pfam domain/function: PF06276 FhuF; PF04183 IucA_IucC [H]
EC number: NA
Molecular weight: Translated: 67131; Mature: 67000
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNTDRTVLSNMVSELATTRALLNCLIKEFALPEECLHYTWPEGMQGIAPGSFVDGGQWK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC GIPLTISLPNQQQFFVLVDRRDHLGSHRYLSDVYARQGQGTWRCLAFAEFARQLLTACEH CEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH MTRASNDELLDQVLQSQHLTAAIVAHNMTGQHPAPLSGYLASEQGLWFGHPNHPAPKARL HHCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEECCCCEEECCCCCCCCCCCC WPEHLAQETYAPEFQAQTALHLFEVPLEGLRITSNGLSEAEVMSGFADQSRARPGHALIC CHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHCHHHHHCCCCCCEEEE MHPVQAQLFMQDRRVQRLLELGDISDLGASGLLASPTASMRTWYIEGHDYFIKGSLNVRI ECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECEEEEE TNCVRKNAWYELESTLIIDELFQRLQQTRPETLGGLSTVAEPGSMSWAPKGVSEADGHWF HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHCCCCCCCCCCCCCCCCCCCHH REQTGAILRENFCRRSGEDCSVMAGTLFARDLRSRPLVHDFLQRFNGAELEDQHLLDWFD HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHH EYQALLLSPVMALFFNHGIVMEPHLQNAVLIHDNGRPQQLLLRDFEGVKLTEELGIKAIQ HHHHHHHHHHHHHHHCCCCEECCCCCCEEEEECCCCCHHHHHHCCCCCEEHHHHCCEEEE VGLHPRIRQSLLYSREQGWNRITYCLLINNLSEAVLALSWERPHLAPLMWQRVERQLQRI ECCCHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHH RDELVLPAPELDALIAGQSIACKTNLKVRLAAKADREANYVRLASPWATEARYA HHHHCCCCCCHHHHHCCCCEEEECCCEEEEEECCCCCCCEEEEECCCCCCCCCC >Mature Secondary Structure TNTDRTVLSNMVSELATTRALLNCLIKEFALPEECLHYTWPEGMQGIAPGSFVDGGQWK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC GIPLTISLPNQQQFFVLVDRRDHLGSHRYLSDVYARQGQGTWRCLAFAEFARQLLTACEH CEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH MTRASNDELLDQVLQSQHLTAAIVAHNMTGQHPAPLSGYLASEQGLWFGHPNHPAPKARL HHCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEECCCCEEECCCCCCCCCCCC WPEHLAQETYAPEFQAQTALHLFEVPLEGLRITSNGLSEAEVMSGFADQSRARPGHALIC CHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHCHHHHHCCCCCCEEEE MHPVQAQLFMQDRRVQRLLELGDISDLGASGLLASPTASMRTWYIEGHDYFIKGSLNVRI ECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEECEEEEE TNCVRKNAWYELESTLIIDELFQRLQQTRPETLGGLSTVAEPGSMSWAPKGVSEADGHWF HHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHCCCCCCCCCCCCCCCCCCCHH REQTGAILRENFCRRSGEDCSVMAGTLFARDLRSRPLVHDFLQRFNGAELEDQHLLDWFD HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHH EYQALLLSPVMALFFNHGIVMEPHLQNAVLIHDNGRPQQLLLRDFEGVKLTEELGIKAIQ HHHHHHHHHHHHHHHCCCCEECCCCCCEEEEECCCCCHHHHHHCCCCCEEHHHHCCEEEE VGLHPRIRQSLLYSREQGWNRITYCLLINNLSEAVLALSWERPHLAPLMWQRVERQLQRI ECCCHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHH RDELVLPAPELDALIAGQSIACKTNLKVRLAAKADREANYVRLASPWATEARYA HHHHCCCCCCHHHHHCCCCEEEECCCEEEEEECCCCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11274118; 11481432 [H]