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The map label for this gene is ntaR [H]

Identifier: 66045800

GI number: 66045800

Start: 2978136

End: 2978876

Strand: Direct

Name: ntaR [H]

Synonym: Psyr_2564

Alternate gene names: 66045800

Gene position: 2978136-2978876 (Clockwise)

Preceding gene: 66045799

Following gene: 66045808

Centisome position: 48.87

GC content: 58.16

Gene sequence:

>741_bases
ATGCAGACAGCATGCGCCAAAAAGTTGAAAGAACGCCCGGAAACTCTATCCGAGCGGATTTACGCCCGAATCAAAGAAGA
CATTTCCGAGTTTCGTCTATTACCCGGCGAACGATTTACTGAAGGTGAAATAGCCGAGCGTGTTCAGGCCAGTCGTACAC
CGGTCAGGCAGGCATTGTTCCGGCTGGAGCAGGAAGGCTATGTGGAGGTTTATTACCGAAGCGGCTGGCAGGTGCGGCCC
TTCGACCCTCATCACTTCGAGGAGCTGTATGACGTTCGGGTGGTGCTCGAGCTGGCGGCGCTCGCCAGGCTGGGTTTGAT
GGACCTGAGCGTCGAGCCGCTGATCGACGAACTCATACGCACCTGGCTGGTGCCGAAAAACGAGCGATTGAGAGACACCG
ATATCCTCGCCGGGCTGGGCGAACGCTTCCATTGCGCGTTGGTCGAGGCGGTGGGCAACCGGGAAATGGCCAGGCTGCAT
TACGAAGTCACCGAAAAGACCCGGACCATCCGGCGTCTCGAATTCAGCGCCTCCAGAATCGATGCAACGTACGAAGAGCA
TGGCAGTATTTTAAAGGCCCTCCTGCAACGTCGGCCGCGACAGGCTCAGCAATTGCTGGAAGCGCATGTAGAGCTCAATA
AGGAGGAAGCGCGCAGAGCCACCCAGCATGTCTTGCGCCGCGCGCGTCATTACGCCGAGAAGAACGGCGAGCCCGCCAGA
TTGCGTGCGCAAGTGCAGTGA

Upstream 100 bases:

>100_bases
ATTGAAGGGATTGCAGAATTTCCACGCTGGTGGATGTCAGGCAGTGCCGCAGGTCATCTGCGCCAAGGTTAAGTAACTGG
ATTACAAGGACGAATCATCA

Downstream 100 bases:

>100_bases
GCGGTTGCTGCTGTATAGACCTGCGCTCAGGATGGCCCGCGCGGCGAGGCGCTGCCGGAAGCACAGCGCCGCGAGCGGCG
GATTCGATTCGAGCTTTGAT

Product: transcriptional regulator GntR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MQTACAKKLKERPETLSERIYARIKEDISEFRLLPGERFTEGEIAERVQASRTPVRQALFRLEQEGYVEVYYRSGWQVRP
FDPHHFEELYDVRVVLELAALARLGLMDLSVEPLIDELIRTWLVPKNERLRDTDILAGLGERFHCALVEAVGNREMARLH
YEVTEKTRTIRRLEFSASRIDATYEEHGSILKALLQRRPRQAQQLLEAHVELNKEEARRATQHVLRRARHYAEKNGEPAR
LRAQVQ

Sequences:

>Translated_246_residues
MQTACAKKLKERPETLSERIYARIKEDISEFRLLPGERFTEGEIAERVQASRTPVRQALFRLEQEGYVEVYYRSGWQVRP
FDPHHFEELYDVRVVLELAALARLGLMDLSVEPLIDELIRTWLVPKNERLRDTDILAGLGERFHCALVEAVGNREMARLH
YEVTEKTRTIRRLEFSASRIDATYEEHGSILKALLQRRPRQAQQLLEAHVELNKEEARRATQHVLRRARHYAEKNGEPAR
LRAQVQ
>Mature_246_residues
MQTACAKKLKERPETLSERIYARIKEDISEFRLLPGERFTEGEIAERVQASRTPVRQALFRLEQEGYVEVYYRSGWQVRP
FDPHHFEELYDVRVVLELAALARLGLMDLSVEPLIDELIRTWLVPKNERLRDTDILAGLGERFHCALVEAVGNREMARLH
YEVTEKTRTIRRLEFSASRIDATYEEHGSILKALLQRRPRQAQQLLEAHVELNKEEARRATQHVLRRARHYAEKNGEPAR
LRAQVQ

Specific function: Probable regulator for the expression of the NTA monooxygenase subunits [H]

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 28849; Mature: 28849

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTACAKKLKERPETLSERIYARIKEDISEFRLLPGERFTEGEIAERVQASRTPVRQALF
CCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHH
RLEQEGYVEVYYRSGWQVRPFDPHHFEELYDVRVVLELAALARLGLMDLSVEPLIDELIR
HHCCCCEEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
TWLVPKNERLRDTDILAGLGERFHCALVEAVGNREMARLHYEVTEKTRTIRRLEFSASRI
HHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DATYEEHGSILKALLQRRPRQAQQLLEAHVELNKEEARRATQHVLRRARHYAEKNGEPAR
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
LRAQVQ
EEEECC
>Mature Secondary Structure
MQTACAKKLKERPETLSERIYARIKEDISEFRLLPGERFTEGEIAERVQASRTPVRQALF
CCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHH
RLEQEGYVEVYYRSGWQVRPFDPHHFEELYDVRVVLELAALARLGLMDLSVEPLIDELIR
HHCCCCEEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
TWLVPKNERLRDTDILAGLGERFHCALVEAVGNREMARLHYEVTEKTRTIRRLEFSASRI
HHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DATYEEHGSILKALLQRRPRQAQQLLEAHVELNKEEARRATQHVLRRARHYAEKNGEPAR
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
LRAQVQ
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA