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The map label for this gene is nagD [H]

Identifier: 66045799

GI number: 66045799

Start: 2977310

End: 2978107

Strand: Direct

Name: nagD [H]

Synonym: Psyr_2563

Alternate gene names: 66045799

Gene position: 2977310-2978107 (Clockwise)

Preceding gene: 66045798

Following gene: 66045800

Centisome position: 48.86

GC content: 60.28

Gene sequence:

>798_bases
ATGCGCTTCGACAGCCTGCTTTTCGATATTGACGGCACACTCCTGCTCAAGGGGCAGCCTCTGCCGGGCGCAGCCGATGC
ATTGAGCTTCGCGCGTTCCCAGGGTTTGAGGCTGCAATTGCTGACCAACACCACGGCGAAGATGCCCGAGGAGCTGGCAG
AGGAGCTTTGTCGCGCCGGAATCGAGGTCGTCCCCGACGAAATCCAGACCGCCACCACGTCCTGTCTGGGCTATTTGCAG
CAACATCCGCACCTCAAGTGCCATCTGCTGGTCCCCGATTCGATACGGCCGGTGTTCAGAGGCATCGCTACAGACGATAC
GAACCCGGACGTAGTGGTCATCAGCGATATCGGCGAAGCCTTCGACTACGCCACGCTGAATCGCTGTTTCCGTATGTTGC
GAGGCGGTGCTCGCCTCATTGCGCTGCAAAAAAACCTGTTCTGGTTCGATCGTGACGGGGAGCGTCTCGATTGCGGCGCC
TTCATCGTCGGGCTCGAGGCCGCAGCACAGGTACAGGCCCTGGTCATGGGCAAGCCGTCGCCGATGTTCTTCGAGGCTGC
CCTGCGCAAACTCGATACCAGCGCCAGCCGCACTCTGGTAGTGGGCGACGACGTTCTGACTGACTGCGCAGGGGCGAAAG
CGGTCGGTGCCAGCAGCCTGCTGGTGCGTACTGGAAAATATGACCCGAGGCTGTTCGAGGCCCATCGGCAAAACGTGGAT
GCGGTGATTGAAGGGATTGCAGAATTTCCACGCTGGTGGATGTCAGGCAGTGCCGCAGGTCATCTGCGCCAAGGTTAA

Upstream 100 bases:

>100_bases
GTCCTGCCGACGCTGAAGTGACATTGCCCGCGATTCGCCATTGGCTGACAGCCACATTCTGACACCTGACTCGATAATTT
CAGCCACAGGGAGCTTATCC

Downstream 100 bases:

>100_bases
GTAACTGGATTACAAGGACGAATCATCAATGCAGACAGCATGCGCCAAAAAGTTGAAAGAACGCCCGGAAACTCTATCCG
AGCGGATTTACGCCCGAATC

Product: HAD family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MRFDSLLFDIDGTLLLKGQPLPGAADALSFARSQGLRLQLLTNTTAKMPEELAEELCRAGIEVVPDEIQTATTSCLGYLQ
QHPHLKCHLLVPDSIRPVFRGIATDDTNPDVVVISDIGEAFDYATLNRCFRMLRGGARLIALQKNLFWFDRDGERLDCGA
FIVGLEAAAQVQALVMGKPSPMFFEAALRKLDTSASRTLVVGDDVLTDCAGAKAVGASSLLVRTGKYDPRLFEAHRQNVD
AVIEGIAEFPRWWMSGSAAGHLRQG

Sequences:

>Translated_265_residues
MRFDSLLFDIDGTLLLKGQPLPGAADALSFARSQGLRLQLLTNTTAKMPEELAEELCRAGIEVVPDEIQTATTSCLGYLQ
QHPHLKCHLLVPDSIRPVFRGIATDDTNPDVVVISDIGEAFDYATLNRCFRMLRGGARLIALQKNLFWFDRDGERLDCGA
FIVGLEAAAQVQALVMGKPSPMFFEAALRKLDTSASRTLVVGDDVLTDCAGAKAVGASSLLVRTGKYDPRLFEAHRQNVD
AVIEGIAEFPRWWMSGSAAGHLRQG
>Mature_265_residues
MRFDSLLFDIDGTLLLKGQPLPGAADALSFARSQGLRLQLLTNTTAKMPEELAEELCRAGIEVVPDEIQTATTSCLGYLQ
QHPHLKCHLLVPDSIRPVFRGIATDDTNPDVVVISDIGEAFDYATLNRCFRMLRGGARLIALQKNLFWFDRDGERLDCGA
FIVGLEAAAQVQALVMGKPSPMFFEAALRKLDTSASRTLVVGDDVLTDCAGAKAVGASSLLVRTGKYDPRLFEAHRQNVD
AVIEGIAEFPRWWMSGSAAGHLRQG

Specific function: Unknown

COG id: COG0647

COG function: function code G; Predicted sugar phosphatases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI14149777, Length=223, Percent_Identity=37.219730941704, Blast_Score=139, Evalue=4e-33,
Organism=Homo sapiens, GI269847098, Length=249, Percent_Identity=32.1285140562249, Blast_Score=127, Evalue=1e-29,
Organism=Homo sapiens, GI269847104, Length=198, Percent_Identity=31.8181818181818, Blast_Score=95, Evalue=6e-20,
Organism=Escherichia coli, GI1786890, Length=227, Percent_Identity=27.7533039647577, Blast_Score=100, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17562356, Length=229, Percent_Identity=34.4978165938865, Blast_Score=126, Evalue=9e-30,
Organism=Caenorhabditis elegans, GI17557870, Length=233, Percent_Identity=31.3304721030043, Blast_Score=115, Evalue=2e-26,
Organism=Drosophila melanogaster, GI19920940, Length=258, Percent_Identity=32.5581395348837, Blast_Score=125, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24656326, Length=252, Percent_Identity=24.6031746031746, Blast_Score=71, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006357
- InterPro:   IPR023215 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 28903; Mature: 28903

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFDSLLFDIDGTLLLKGQPLPGAADALSFARSQGLRLQLLTNTTAKMPEELAEELCRAG
CCCHHEEEECCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCHHCCHHHHHHHHHHCC
IEVVPDEIQTATTSCLGYLQQHPHLKCHLLVPDSIRPVFRGIATDDTNPDVVVISDIGEA
CEECCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCCCEEEEECCCHH
FDYATLNRCFRMLRGGARLIALQKNLFWFDRDGERLDCGAFIVGLEAAAQVQALVMGKPS
HHHHHHHHHHHHHHCCCEEEEEECCEEEECCCCCEEECCCEEEEHHHHHHHHHHEECCCC
PMFFEAALRKLDTSASRTLVVGDDVLTDCAGAKAVGASSLLVRTGKYDPRLFEAHRQNVD
CHHHHHHHHHHCCCCCCEEEECCHHHHHHCCCCCCCCCHHEEECCCCCHHHHHHHHCCHH
AVIEGIAEFPRWWMSGSAAGHLRQG
HHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRFDSLLFDIDGTLLLKGQPLPGAADALSFARSQGLRLQLLTNTTAKMPEELAEELCRAG
CCCHHEEEECCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCHHCCHHHHHHHHHHCC
IEVVPDEIQTATTSCLGYLQQHPHLKCHLLVPDSIRPVFRGIATDDTNPDVVVISDIGEA
CEECCHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCCCCCCCEEEEECCCHH
FDYATLNRCFRMLRGGARLIALQKNLFWFDRDGERLDCGAFIVGLEAAAQVQALVMGKPS
HHHHHHHHHHHHHHCCCEEEEEECCEEEECCCCCEEECCCEEEEHHHHHHHHHHEECCCC
PMFFEAALRKLDTSASRTLVVGDDVLTDCAGAKAVGASSLLVRTGKYDPRLFEAHRQNVD
CHHHHHHHHHHCCCCCCEEEECCHHHHHHCCCCCCCCCHHEEECCCCCHHHHHHHHCCHH
AVIEGIAEFPRWWMSGSAAGHLRQG
HHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]