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The map label for this gene is 66045790

Identifier: 66045790

GI number: 66045790

Start: 2967617

End: 2968633

Strand: Direct

Name: 66045790

Synonym: Psyr_2554

Alternate gene names: NA

Gene position: 2967617-2968633 (Clockwise)

Preceding gene: 66045789

Following gene: 66045791

Centisome position: 48.7

GC content: 61.36

Gene sequence:

>1017_bases
ATGGCAGACACAATCGAACTCGACACGATGGACAGTGGCGCTTACGACCGACGCTCCGAGCGTGCCACGTTGGCACGCGA
CAACCTGTCACTGACCTCGGATCTCAAGCAACTCAGCAGCTGGCGGCAGGCATTGCAGATAGGCGTGCAGTGGGCAGTGA
TCGTCGCTGCAGTCACGCTGGCCGAAGTCAGCGACTCGACGCTGGTGTGTCTGATCGCGGTAATCATCATTGCGACGCGA
CAGCACGCGTTGCTGGTACTCATGCACGATGCGGCGCATTTGCTGATCAGCCGTGACAAGCGGCGCAACGATCTGATCTC
CAACGTATTCCTGACGTTTCCCCTGACGTTGAGCACGTCACGCTACCGGGCTCACCACATTGCCCACCACAAGCACCTCA
ACACGCCCGACGATCCGGACTACGCCGATGCCTTCGCACCCGCCAGTTCCGGACTGTTCTGGCAGGCTCTGCTGCGCGAC
ATCAGTGGGCTGTCGACCCTGCAATCGCTACGCACGATGGACAGCTTCAGCGTGATCGGACTGTTCACTCACCCCGTGCC
GTCGACCCGCATCGAGCGCTATCAGGCAATGGCCTTTTATGCCTGTGCCGCGCTGCTCATCACGGCTTTGCAGGCCTGGC
CGGCTGTGCTGCTGTACTGGCTGGCGCCACTGGTGTTCTTTCTGCCGCCGATTCTACGCATTCGCAGCCTGTCGGAGCAC
GCAGGGCTTTCGACCCAGAGTGTGAAGCGCGATGCACGCAGTGTCAGTCCGGGCTGGCTGGAACGAGGGCTGTTTGCGCC
GTGCAATATCAATCGGCACTGGGAGCATCACCTTTTTCAACAGATACCCAGCTATCACCTGGGCACCTTGTCCCGGCGTC
TTGCCCAGAGCCTGCCTGGTTCAGCTGCGGCCTGCAGCACCCAGGGTTACCTCTTGGGGGAACGCAGCATGCGCGCCGAA
TTGTATGGTGCCAACGGCCGGGCGCGTGCCGTGGCCTCTCTGGATCAGGAGGCTTGA

Upstream 100 bases:

>100_bases
CATGCGCCCGAGGCACGGATCAGCCTGGACAAGCTTGTCGCGAAATCGGCGGCAATGCACGGCTAGCAGGCCCTTTCAAC
GATTGAACGGGAGATGGAAC

Downstream 100 bases:

>100_bases
ACCCATGATGCTCACAGGTTCTGAAATAGTGAAGATGCGCGAGGTCGGCAGTGTCGTCATCGAGCCCTTCGACCCTGCAC
ATGTCGAGGTCAACTCATAC

Product: Fatty acid desaturase

Products: NA

Alternate protein names: Fatty Acid Desaturase Family Protein; Fatty Acid Desaturase Family Proteiin; Fatty Acid Desaturase Domain-Containing Protein; Fatty Acid Desaturase Subfamily; Fatty Acid Desaturase Subfamily Protein

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MADTIELDTMDSGAYDRRSERATLARDNLSLTSDLKQLSSWRQALQIGVQWAVIVAAVTLAEVSDSTLVCLIAVIIIATR
QHALLVLMHDAAHLLISRDKRRNDLISNVFLTFPLTLSTSRYRAHHIAHHKHLNTPDDPDYADAFAPASSGLFWQALLRD
ISGLSTLQSLRTMDSFSVIGLFTHPVPSTRIERYQAMAFYACAALLITALQAWPAVLLYWLAPLVFFLPPILRIRSLSEH
AGLSTQSVKRDARSVSPGWLERGLFAPCNINRHWEHHLFQQIPSYHLGTLSRRLAQSLPGSAAACSTQGYLLGERSMRAE
LYGANGRARAVASLDQEA

Sequences:

>Translated_338_residues
MADTIELDTMDSGAYDRRSERATLARDNLSLTSDLKQLSSWRQALQIGVQWAVIVAAVTLAEVSDSTLVCLIAVIIIATR
QHALLVLMHDAAHLLISRDKRRNDLISNVFLTFPLTLSTSRYRAHHIAHHKHLNTPDDPDYADAFAPASSGLFWQALLRD
ISGLSTLQSLRTMDSFSVIGLFTHPVPSTRIERYQAMAFYACAALLITALQAWPAVLLYWLAPLVFFLPPILRIRSLSEH
AGLSTQSVKRDARSVSPGWLERGLFAPCNINRHWEHHLFQQIPSYHLGTLSRRLAQSLPGSAAACSTQGYLLGERSMRAE
LYGANGRARAVASLDQEA
>Mature_337_residues
ADTIELDTMDSGAYDRRSERATLARDNLSLTSDLKQLSSWRQALQIGVQWAVIVAAVTLAEVSDSTLVCLIAVIIIATRQ
HALLVLMHDAAHLLISRDKRRNDLISNVFLTFPLTLSTSRYRAHHIAHHKHLNTPDDPDYADAFAPASSGLFWQALLRDI
SGLSTLQSLRTMDSFSVIGLFTHPVPSTRIERYQAMAFYACAALLITALQAWPAVLLYWLAPLVFFLPPILRIRSLSEHA
GLSTQSVKRDARSVSPGWLERGLFAPCNINRHWEHHLFQQIPSYHLGTLSRRLAQSLPGSAAACSTQGYLLGERSMRAEL
YGANGRARAVASLDQEA

Specific function: Unknown

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37519; Mature: 37388

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTIELDTMDSGAYDRRSERATLARDNLSLTSDLKQLSSWRQALQIGVQWAVIVAAVTL
CCCCEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEVSDSTLVCLIAVIIIATRQHALLVLMHDAAHLLISRDKRRNDLISNVFLTFPLTLSTS
HHCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCHHHHHHHHHHHHHCCEEECCC
RYRAHHIAHHKHLNTPDDPDYADAFAPASSGLFWQALLRDISGLSTLQSLRTMDSFSVIG
HHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHEEE
LFTHPVPSTRIERYQAMAFYACAALLITALQAWPAVLLYWLAPLVFFLPPILRIRSLSEH
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLSTQSVKRDARSVSPGWLERGLFAPCNINRHWEHHLFQQIPSYHLGTLSRRLAQSLPG
CCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCC
SAAACSTQGYLLGERSMRAELYGANGRARAVASLDQEA
CCHHHCCCCEEECCHHHHHHEECCCCCHHHHHHCCCCC
>Mature Secondary Structure 
ADTIELDTMDSGAYDRRSERATLARDNLSLTSDLKQLSSWRQALQIGVQWAVIVAAVTL
CCCEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEVSDSTLVCLIAVIIIATRQHALLVLMHDAAHLLISRDKRRNDLISNVFLTFPLTLSTS
HHCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCHHHHHHHHHHHHHCCEEECCC
RYRAHHIAHHKHLNTPDDPDYADAFAPASSGLFWQALLRDISGLSTLQSLRTMDSFSVIG
HHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHEEE
LFTHPVPSTRIERYQAMAFYACAALLITALQAWPAVLLYWLAPLVFFLPPILRIRSLSEH
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLSTQSVKRDARSVSPGWLERGLFAPCNINRHWEHHLFQQIPSYHLGTLSRRLAQSLPG
CCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCC
SAAACSTQGYLLGERSMRAELYGANGRARAVASLDQEA
CCHHHCCCCEEECCHHHHHHEECCCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA