| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045789
Identifier: 66045789
GI number: 66045789
Start: 2966473
End: 2967582
Strand: Direct
Name: 66045789
Synonym: Psyr_2553
Alternate gene names: NA
Gene position: 2966473-2967582 (Clockwise)
Preceding gene: 66045788
Following gene: 66045790
Centisome position: 48.68
GC content: 61.89
Gene sequence:
>1110_bases ATGCGCTCGACACTGATCATCACCGGGGCCAGTGGTGCTCTGGGCTCCTGGTTTGTGCGCGACTGGCTCAGTCAGCATCC TGCCTCGCATGTGATTGCCTTGTGCCGTTCCGCGCAGGCGGCCAGTCGCTGCCTGCAGGATTTGCCTGCGCACAGCCGCT CGCGGCTCGAATGCCGGACCGCCGATCTGACAGACGCCGACTCCCTGAATGCGCTGGCCGCCACGCTGCCCGCCATCGAG TGCGCCACGGCAGTCCATCTGGCTGCCGATGTGGCCTGGGACAAGAGCTTCGAAGAGATGCACGAGTTGAATGTCGAAGG TGCGCAACTGTTCTGCGGCTTTGTCCAGAAACTGGTGCGCAAGCCGCATTTCATTTACGTGTCCACAGCGTTCACCCGTT GTGAAGGCTGGACCTATCGCAATGGCTATGAGGAAAGCAAGGCAGCGGCAGAGCGTGGTTTGCGTGAGACTTTCGGCACG CAGATGCCGATTTCCGTGTTCAGTTGCAGCCTGGTCATCGGCGCGACCAGCGATGGCGCAATCAGTCGTTTTCACGGCCT GTACCCGCTGATTCGCTTCATCAATGCCTTTGCGCCGCCGTTTCTGGTCGGCAATCGCCAGGGGCTGTTCGATCTGGTGC CTATCGATTGGGTGGTGGACGAATTGATCCACCTGGTCAGTCATTGCGTGGCCGGCGGCGAAGCGCGCGAGGTCGTCGCC TCGGCGGGGGATGCACGCCTGCCTTATGAGCAGGTGATCCGCATCATCGAGTCGCGCGTCGATCATGCGCGGCAGCAAGC CGGCATTGCGCCCTTGACCCCGGCACCGATCCTGCGCAGCCGGCAATGGGCATTCCTCAAGCGCTCGCTGGTCGCATGGC GGCCCGAAGGTATTTCGACCCGGGATTTCCGCTATTTCGAGCGCCTGTTGCAAATCTATGGCGTGTACGCCGAAAGCGAT CTGGTCAGGCCACCGTTGAACGTCCGGAACCCGGCACCCGGCGCGGAAGTGTTTTTACCCAAAGCGGTGGATTACTGGCT GGCTCATGCGCCCGAGGCACGGATCAGCCTGGACAAGCTTGTCGCGAAATCGGCGGCAATGCACGGCTAG
Upstream 100 bases:
>100_bases GAGCGGGCGATTCGCGCCAACAACATCCAGATGCTGGACGGGATACGCAATCAACTGCTCGCTCGCCGTCATCAGCGGGT TGCGGCAGGGGGCTGCTGAT
Downstream 100 bases:
>100_bases CAGGCCCTTTCAACGATTGAACGGGAGATGGAACATGGCAGACACAATCGAACTCGACACGATGGACAGTGGCGCTTACG ACCGACGCTCCGAGCGTGCC
Product: dehydrogenase domain-containing protein
Products: NA
Alternate protein names: Male Sterility Domain Protein
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MRSTLIITGASGALGSWFVRDWLSQHPASHVIALCRSAQAASRCLQDLPAHSRSRLECRTADLTDADSLNALAATLPAIE CATAVHLAADVAWDKSFEEMHELNVEGAQLFCGFVQKLVRKPHFIYVSTAFTRCEGWTYRNGYEESKAAAERGLRETFGT QMPISVFSCSLVIGATSDGAISRFHGLYPLIRFINAFAPPFLVGNRQGLFDLVPIDWVVDELIHLVSHCVAGGEAREVVA SAGDARLPYEQVIRIIESRVDHARQQAGIAPLTPAPILRSRQWAFLKRSLVAWRPEGISTRDFRYFERLLQIYGVYAESD LVRPPLNVRNPAPGAEVFLPKAVDYWLAHAPEARISLDKLVAKSAAMHG
Sequences:
>Translated_369_residues MRSTLIITGASGALGSWFVRDWLSQHPASHVIALCRSAQAASRCLQDLPAHSRSRLECRTADLTDADSLNALAATLPAIE CATAVHLAADVAWDKSFEEMHELNVEGAQLFCGFVQKLVRKPHFIYVSTAFTRCEGWTYRNGYEESKAAAERGLRETFGT QMPISVFSCSLVIGATSDGAISRFHGLYPLIRFINAFAPPFLVGNRQGLFDLVPIDWVVDELIHLVSHCVAGGEAREVVA SAGDARLPYEQVIRIIESRVDHARQQAGIAPLTPAPILRSRQWAFLKRSLVAWRPEGISTRDFRYFERLLQIYGVYAESD LVRPPLNVRNPAPGAEVFLPKAVDYWLAHAPEARISLDKLVAKSAAMHG >Mature_369_residues MRSTLIITGASGALGSWFVRDWLSQHPASHVIALCRSAQAASRCLQDLPAHSRSRLECRTADLTDADSLNALAATLPAIE CATAVHLAADVAWDKSFEEMHELNVEGAQLFCGFVQKLVRKPHFIYVSTAFTRCEGWTYRNGYEESKAAAERGLRETFGT QMPISVFSCSLVIGATSDGAISRFHGLYPLIRFINAFAPPFLVGNRQGLFDLVPIDWVVDELIHLVSHCVAGGEAREVVA SAGDARLPYEQVIRIIESRVDHARQQAGIAPLTPAPILRSRQWAFLKRSLVAWRPEGISTRDFRYFERLLQIYGVYAESD LVRPPLNVRNPAPGAEVFLPKAVDYWLAHAPEARISLDKLVAKSAAMHG
Specific function: Unknown
COG id: COG3320
COG function: function code Q; Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40763; Mature: 40763
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSTLIITGASGALGSWFVRDWLSQHPASHVIALCRSAQAASRCLQDLPAHSRSRLECRT CCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEC ADLTDADSLNALAATLPAIECATAVHLAADVAWDKSFEEMHELNVEGAQLFCGFVQKLVR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC KPHFIYVSTAFTRCEGWTYRNGYEESKAAAERGLRETFGTQMPISVFSCSLVIGATSDGA CCCEEEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEECCCCCH ISRFHGLYPLIRFINAFAPPFLVGNRQGLFDLVPIDWVVDELIHLVSHCVAGGEAREVVA HHHHHHHHHHHHHHHHCCCCEEECCCCCCEECCCHHHHHHHHHHHHHHHHCCCHHHHHHH SAGDARLPYEQVIRIIESRVDHARQQAGIAPLTPAPILRSRQWAFLKRSLVAWRPEGIST CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCH RDFRYFERLLQIYGVYAESDLVRPPLNVRNPAPGAEVFLPKAVDYWLAHAPEARISLDKL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHCCCCHHHHHHHH VAKSAAMHG HHHHHHCCC >Mature Secondary Structure MRSTLIITGASGALGSWFVRDWLSQHPASHVIALCRSAQAASRCLQDLPAHSRSRLECRT CCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEC ADLTDADSLNALAATLPAIECATAVHLAADVAWDKSFEEMHELNVEGAQLFCGFVQKLVR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC KPHFIYVSTAFTRCEGWTYRNGYEESKAAAERGLRETFGTQMPISVFSCSLVIGATSDGA CCCEEEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEECCCCCH ISRFHGLYPLIRFINAFAPPFLVGNRQGLFDLVPIDWVVDELIHLVSHCVAGGEAREVVA HHHHHHHHHHHHHHHHCCCCEEECCCCCCEECCCHHHHHHHHHHHHHHHHCCCHHHHHHH SAGDARLPYEQVIRIIESRVDHARQQAGIAPLTPAPILRSRQWAFLKRSLVAWRPEGIST CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCH RDFRYFERLLQIYGVYAESDLVRPPLNVRNPAPGAEVFLPKAVDYWLAHAPEARISLDKL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHCCCCHHHHHHHH VAKSAAMHG HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA