| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045788
Identifier: 66045788
GI number: 66045788
Start: 2966004
End: 2966471
Strand: Direct
Name: 66045788
Synonym: Psyr_2552
Alternate gene names: NA
Gene position: 2966004-2966471 (Clockwise)
Preceding gene: 66045787
Following gene: 66045789
Centisome position: 48.67
GC content: 60.47
Gene sequence:
>468_bases ATGCCTGATGTATCAACCAGTGTTCTTCTCGGTGACTTCGAGCCTGGCGAGGTCTGGCCGATTCTCTCGGACTTCGCTCG CTATCCCGACTTCATGAGCGATGTGCTGGAGGTGATCGTTCACCCCCGGCAGAGTGAATACGTTTCCAGTACGTGGCGCG TATTGATCAATGGCAGCGAGCTGACCTGGACCGAGCAGGACTGGCTGGTGACGGACGAGCGCATCGAGTTCAAGCAGACC GATGGCGACCTTGAAGTCTGGTACGGCGAGTGGCTGCTGATCCAGCGCGAAGACGGCTTGCACGTGGACCTGAACGTCAC CTTCGACCTGGGCATCCCGTCGCTGGCCGAAGTCCTGCACCCGATCGGTGAGCGGGCGATTCGCGCCAACAACATCCAGA TGCTGGACGGGATACGCAATCAACTGCTCGCTCGCCGTCATCAGCGGGTTGCGGCAGGGGGCTGCTGA
Upstream 100 bases:
>100_bases CGACGCGACCATCTCCCGAGACCACCTCGAACAAGGCATCAACAGTTTCTGTGATGCCGTCGATGCGGCTTATCGCTCCA TTCAATGACGGAGAATTCCT
Downstream 100 bases:
>100_bases TATGCGCTCGACACTGATCATCACCGGGGCCAGTGGTGCTCTGGGCTCCTGGTTTGTGCGCGACTGGCTCAGTCAGCATC CTGCCTCGCATGTGATTGCC
Product: cyclase/dehydrase
Products: NA
Alternate protein names: Polyketide Cyclase/Dehydrase Superfamily; Streptomyces Cyclase/Dehydrase
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MPDVSTSVLLGDFEPGEVWPILSDFARYPDFMSDVLEVIVHPRQSEYVSSTWRVLINGSELTWTEQDWLVTDERIEFKQT DGDLEVWYGEWLLIQREDGLHVDLNVTFDLGIPSLAEVLHPIGERAIRANNIQMLDGIRNQLLARRHQRVAAGGC
Sequences:
>Translated_155_residues MPDVSTSVLLGDFEPGEVWPILSDFARYPDFMSDVLEVIVHPRQSEYVSSTWRVLINGSELTWTEQDWLVTDERIEFKQT DGDLEVWYGEWLLIQREDGLHVDLNVTFDLGIPSLAEVLHPIGERAIRANNIQMLDGIRNQLLARRHQRVAAGGC >Mature_154_residues PDVSTSVLLGDFEPGEVWPILSDFARYPDFMSDVLEVIVHPRQSEYVSSTWRVLINGSELTWTEQDWLVTDERIEFKQTD GDLEVWYGEWLLIQREDGLHVDLNVTFDLGIPSLAEVLHPIGERAIRANNIQMLDGIRNQLLARRHQRVAAGGC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17747; Mature: 17616
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDVSTSVLLGDFEPGEVWPILSDFARYPDFMSDVLEVIVHPRQSEYVSSTWRVLINGSE CCCCCCEEEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHCCEEEEEEECCE LTWTEQDWLVTDERIEFKQTDGDLEVWYGEWLLIQREDGLHVDLNVTFDLGIPSLAEVLH EEECCCCCEEECCCEEEEECCCCEEEEECCEEEEECCCCEEEEEEEEEECCCHHHHHHHH PIGERAIRANNIQMLDGIRNQLLARRHQRVAAGGC HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PDVSTSVLLGDFEPGEVWPILSDFARYPDFMSDVLEVIVHPRQSEYVSSTWRVLINGSE CCCCCEEEEECCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHHCCEEEEEEECCE LTWTEQDWLVTDERIEFKQTDGDLEVWYGEWLLIQREDGLHVDLNVTFDLGIPSLAEVLH EEECCCCCEEECCCEEEEECCCCEEEEECCEEEEECCCCEEEEEEEEEECCCHHHHHHHH PIGERAIRANNIQMLDGIRNQLLARRHQRVAAGGC HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA