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The map label for this gene is yiaF [H]

Identifier: 66045733

GI number: 66045733

Start: 2909158

End: 2909859

Strand: Direct

Name: yiaF [H]

Synonym: Psyr_2497

Alternate gene names: 66045733

Gene position: 2909158-2909859 (Clockwise)

Preceding gene: 66045730

Following gene: 66045734

Centisome position: 47.74

GC content: 58.26

Gene sequence:

>702_bases
ATGAAGTCCCTTTTCCGTCCAGCTTTGCTGCTGGCTGTCGCTTTACCCCTGTTCCTGGCCGGCTGCGGAGACAAGGAGCC
CGAGCAGCGCACTGCGTTCACTCAGTTCCTGCAAACCCGAATTGTCGACAAGCCGGGCGTGCATGTGCCCAAGCTGACGG
ATGAAGAAAAGAAAACCTTTGGTGACTACACCTCGCACTATGCGGTCATCTCCGACTTCGGCGCAGGCATGGACTCTGCT
GTCCAGCCGCTCGCCGGCTTGATGCAGAAAGGCTCCTTTCATTCGGTCGGCGATGTCATTCAACGTCGCGCTGACCTGGC
TGCCGTGCAGACAGGCCTCGATGAAGTGGGCGAAAAGCTGACCATCGAGCAGGGCAAGGCAGACGCCGCCCGCGCGAAAC
TCAAGCAGCCGGAAGACCTGAAGGTGGTTTACGACAAGGCCTACGACCGAACTGTCAGCGTACCCGCCAACACCTTTCGC
GAAGTGCTGCCGCAGATAAAGGGCACCTTTTCCAGTGGCCTGAAGGTTGCCGATTATGTGGACGCGCACAAATCGCAGAT
CGATATCTCGGGTTCGACGATCACCGTCAAGGATCCTGTGGTCCAGACCGAGCTCAACAAACTGCTGCAAGAGCTGAACG
AGCAGGGCAAGAACGCTCAACAAGCCCAGTCCAAGCTGCAATCGCTGATGACCGGCCGCTGA

Upstream 100 bases:

>100_bases
TCGCGGAACTAGATGAGGCGATGACGAGACTATAAGCACGCTCGTGTTCAGCAGGCGTGGCCTCTGAGCGTGCATTCTTA
TGATTCCGGAGGTTACTGAC

Downstream 100 bases:

>100_bases
TATCGAGCTGCTGCGCCTGAAGTGACGGCCCGGCCCTGATGCCGGGCCGGTCCTGATGCCGGGCCGGTCCTTGTGTCAGG
TATGATTCGGCCATCTGTCT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MKSLFRPALLLAVALPLFLAGCGDKEPEQRTAFTQFLQTRIVDKPGVHVPKLTDEEKKTFGDYTSHYAVISDFGAGMDSA
VQPLAGLMQKGSFHSVGDVIQRRADLAAVQTGLDEVGEKLTIEQGKADAARAKLKQPEDLKVVYDKAYDRTVSVPANTFR
EVLPQIKGTFSSGLKVADYVDAHKSQIDISGSTITVKDPVVQTELNKLLQELNEQGKNAQQAQSKLQSLMTGR

Sequences:

>Translated_233_residues
MKSLFRPALLLAVALPLFLAGCGDKEPEQRTAFTQFLQTRIVDKPGVHVPKLTDEEKKTFGDYTSHYAVISDFGAGMDSA
VQPLAGLMQKGSFHSVGDVIQRRADLAAVQTGLDEVGEKLTIEQGKADAARAKLKQPEDLKVVYDKAYDRTVSVPANTFR
EVLPQIKGTFSSGLKVADYVDAHKSQIDISGSTITVKDPVVQTELNKLLQELNEQGKNAQQAQSKLQSLMTGR
>Mature_233_residues
MKSLFRPALLLAVALPLFLAGCGDKEPEQRTAFTQFLQTRIVDKPGVHVPKLTDEEKKTFGDYTSHYAVISDFGAGMDSA
VQPLAGLMQKGSFHSVGDVIQRRADLAAVQTGLDEVGEKLTIEQGKADAARAKLKQPEDLKVVYDKAYDRTVSVPANTFR
EVLPQIKGTFSSGLKVADYVDAHKSQIDISGSTITVKDPVVQTELNKLLQELNEQGKNAQQAQSKLQSLMTGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082290, Length=228, Percent_Identity=31.140350877193, Blast_Score=101, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021413 [H]

Pfam domain/function: PF11254 DUF3053 [H]

EC number: NA

Molecular weight: Translated: 25417; Mature: 25417

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLFRPALLLAVALPLFLAGCGDKEPEQRTAFTQFLQTRIVDKPGVHVPKLTDEEKKTF
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
GDYTSHYAVISDFGAGMDSAVQPLAGLMQKGSFHSVGDVIQRRADLAAVQTGLDEVGEKL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHE
TIEQGKADAARAKLKQPEDLKVVYDKAYDRTVSVPANTFREVLPQIKGTFSSGLKVADYV
ECCCCCHHHHHHHCCCCCCHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHCCCHHHHHH
DAHKSQIDISGSTITVKDPVVQTELNKLLQELNEQGKNAQQAQSKLQSLMTGR
HHHHHEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSLFRPALLLAVALPLFLAGCGDKEPEQRTAFTQFLQTRIVDKPGVHVPKLTDEEKKTF
CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
GDYTSHYAVISDFGAGMDSAVQPLAGLMQKGSFHSVGDVIQRRADLAAVQTGLDEVGEKL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHE
TIEQGKADAARAKLKQPEDLKVVYDKAYDRTVSVPANTFREVLPQIKGTFSSGLKVADYV
ECCCCCHHHHHHHCCCCCCHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHCCCHHHHHH
DAHKSQIDISGSTITVKDPVVQTELNKLLQELNEQGKNAQQAQSKLQSLMTGR
HHHHHEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]