| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is pgl [H]
Identifier: 66045730
GI number: 66045730
Start: 2904276
End: 2905409
Strand: Direct
Name: pgl [H]
Synonym: Psyr_2494
Alternate gene names: 66045730
Gene position: 2904276-2905409 (Clockwise)
Preceding gene: 66045727
Following gene: 66045733
Centisome position: 47.66
GC content: 60.41
Gene sequence:
>1134_bases ATGAAAAATATTCTGTTGCTGGCCGCTGCAGTCGGTTGTTCATTCGGCCTGAGCGCCCAGGCAGCCACCTTCGCCTATAT CTCCAGCCCTACCGATGGGCTCGTCTCTCAATACCGTCTCGATGAGCAGAGCGGGGCGCTCAGTCTGGTCGAGCAAACCA GGGCGGGTGATCAGGTCAATCCGATGGCCATCACGCCGGATGGCAGAGCGTTATTCGCGGCGCTGCGCGCCAAGCCGTAT CAAGTGCTGAGTTTCAGCATCGAGCCTGGCACCGGACACCTCAAACCGCTGAGTCAGGCACCGCTGGCCGAGAGTCTGGC CTACCTGTCTACCGATCGCAGCGGACGCTTCCTGTTTGGTGCGTCCTATGGCGCCGACTTGCTCAGCGTCCAGCCCATCG ATGCGCAGCACCGCCCGAGCGACAGCATTCAGACTTACAAGACCGGCATGCATGCGCATTCAGTGCGTACCGATCCGAGC AACCGGTTTGTGTACGCTGGCAACCTGGGCGTCGATCGTGTGCTGCAATACCGACTGGAGCCCAAGGACGGCAAGCTTGT CCCCATCGGCGAGGGCTATGTCGCCGTTCCCGACAATACCGGCCCGCGCCACCTGGCCTTTTCGTCCGACGGCAAGTTTC TGTATGTCGTCGGCGAAATGAGTGGCACCGTCACTGCCTTCGCGATCAATCAGAAAACCGGTGCGTTGAAGCAGACCAGT CAGGCAGACGGTATTCCCAAACGCTTGAACCTGGCGCCGGGACAGGCTCGCGATGCGCGCAACAACGACCTCAAGGATGA TCCGACGCCGCGCATCTGGGCTGCGGATATTCGCCTCGCGCCGAACGGCAAATGGCTGTTCATCAGTGAGCGCACCAGCA GCAGCGTGTCGGTGTTCAAGATTGAGCCCGCCAGTGGCAAGGTGGCGTTCGTTGACAATTACCCCGTTCAGGAAAAGCAG CCGCGCAACATCGCGGTGTCGCCCAATGGGCGCTGGTTGCTGGTGAGTGGCGAGAAAAGCGATAAGGTGGGCAGTTACGC CATAGGCGAGAAGGGTGCCTTGCAACGTGTCAGCGAAGCACCCTCGGGCAAGGGTGCGCTGTGGATTGAAATGCTCAGCC AGCCGAGCGAATAA
Upstream 100 bases:
>100_bases CAGGCTAACGGTATTATGCGGGTTGGTTATCAGGCAGTTGCCGTTGTGAAGATATGCTCATAGGATGACTGATCACATCA CAATAATAAAAAGGTTAGTC
Downstream 100 bases:
>100_bases GCGCTCTGAAACTAAAAAGCCCTGTCACAAGACAGGGCTTTTTACTATTGCGGGCTGACAGGCTTAGAACGTAACGCCCT GGCTACGCAGGTAGTCGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: 6-P-gluconolactonase [H]
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MKNILLLAAAVGCSFGLSAQAATFAYISSPTDGLVSQYRLDEQSGALSLVEQTRAGDQVNPMAITPDGRALFAALRAKPY QVLSFSIEPGTGHLKPLSQAPLAESLAYLSTDRSGRFLFGASYGADLLSVQPIDAQHRPSDSIQTYKTGMHAHSVRTDPS NRFVYAGNLGVDRVLQYRLEPKDGKLVPIGEGYVAVPDNTGPRHLAFSSDGKFLYVVGEMSGTVTAFAINQKTGALKQTS QADGIPKRLNLAPGQARDARNNDLKDDPTPRIWAADIRLAPNGKWLFISERTSSSVSVFKIEPASGKVAFVDNYPVQEKQ PRNIAVSPNGRWLLVSGEKSDKVGSYAIGEKGALQRVSEAPSGKGALWIEMLSQPSE
Sequences:
>Translated_377_residues MKNILLLAAAVGCSFGLSAQAATFAYISSPTDGLVSQYRLDEQSGALSLVEQTRAGDQVNPMAITPDGRALFAALRAKPY QVLSFSIEPGTGHLKPLSQAPLAESLAYLSTDRSGRFLFGASYGADLLSVQPIDAQHRPSDSIQTYKTGMHAHSVRTDPS NRFVYAGNLGVDRVLQYRLEPKDGKLVPIGEGYVAVPDNTGPRHLAFSSDGKFLYVVGEMSGTVTAFAINQKTGALKQTS QADGIPKRLNLAPGQARDARNNDLKDDPTPRIWAADIRLAPNGKWLFISERTSSSVSVFKIEPASGKVAFVDNYPVQEKQ PRNIAVSPNGRWLLVSGEKSDKVGSYAIGEKGALQRVSEAPSGKGALWIEMLSQPSE >Mature_377_residues MKNILLLAAAVGCSFGLSAQAATFAYISSPTDGLVSQYRLDEQSGALSLVEQTRAGDQVNPMAITPDGRALFAALRAKPY QVLSFSIEPGTGHLKPLSQAPLAESLAYLSTDRSGRFLFGASYGADLLSVQPIDAQHRPSDSIQTYKTGMHAHSVRTDPS NRFVYAGNLGVDRVLQYRLEPKDGKLVPIGEGYVAVPDNTGPRHLAFSSDGKFLYVVGEMSGTVTAFAINQKTGALKQTS QADGIPKRLNLAPGQARDARNNDLKDDPTPRIWAADIRLAPNGKWLFISERTSSSVSVFKIEPASGKVAFVDNYPVQEKQ PRNIAVSPNGRWLLVSGEKSDKVGSYAIGEKGALQRVSEAPSGKGALWIEMLSQPSE
Specific function: Catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate [H]
COG id: COG2706
COG function: function code G; 3-carboxymuconate cyclase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cycloisomerase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1786983, Length=346, Percent_Identity=28.6127167630058, Blast_Score=157, Evalue=9e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022528 - InterPro: IPR019405 - InterPro: IPR011045 - InterPro: IPR015943 [H]
Pfam domain/function: PF10282 DUF2394 [H]
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 40493; Mature: 40493
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNILLLAAAVGCSFGLSAQAATFAYISSPTDGLVSQYRLDEQSGALSLVEQTRAGDQVN CCCEEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCC PMAITPDGRALFAALRAKPYQVLSFSIEPGTGHLKPLSQAPLAESLAYLSTDRSGRFLFG CEEECCCCHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEE ASYGADLLSVQPIDAQHRPSDSIQTYKTGMHAHSVRTDPSNRFVYAGNLGVDRVLQYRLE CCCCCCEEEECCCCCCCCCCCCHHHHHCCCEEEEEECCCCCCEEEECCCCHHHHHHEEEC PKDGKLVPIGEGYVAVPDNTGPRHLAFSSDGKFLYVVGEMSGTVTAFAINQKTGALKQTS CCCCCEEEECCCEEECCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEEECCCCCCCCCH QADGIPKRLNLAPGQARDARNNDLKDDPTPRIWAADIRLAPNGKWLFISERTSSSVSVFK HHCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCEEEEE IEPASGKVAFVDNYPVQEKQPRNIAVSPNGRWLLVSGEKSDKVGSYAIGEKGALQRVSEA EECCCCCEEEEECCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCEECCCCHHHHHHHCC PSGKGALWIEMLSQPSE CCCCCEEEEEECCCCCC >Mature Secondary Structure MKNILLLAAAVGCSFGLSAQAATFAYISSPTDGLVSQYRLDEQSGALSLVEQTRAGDQVN CCCEEEEEEECCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCC PMAITPDGRALFAALRAKPYQVLSFSIEPGTGHLKPLSQAPLAESLAYLSTDRSGRFLFG CEEECCCCHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEE ASYGADLLSVQPIDAQHRPSDSIQTYKTGMHAHSVRTDPSNRFVYAGNLGVDRVLQYRLE CCCCCCEEEECCCCCCCCCCCCHHHHHCCCEEEEEECCCCCCEEEECCCCHHHHHHEEEC PKDGKLVPIGEGYVAVPDNTGPRHLAFSSDGKFLYVVGEMSGTVTAFAINQKTGALKQTS CCCCCEEEECCCEEECCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEEECCCCCCCCCH QADGIPKRLNLAPGQARDARNNDLKDDPTPRIWAADIRLAPNGKWLFISERTSSSVSVFK HHCCCCCEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEECCCCCCEEEEE IEPASGKVAFVDNYPVQEKQPRNIAVSPNGRWLLVSGEKSDKVGSYAIGEKGALQRVSEA EECCCCCEEEEECCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCEECCCCHHHHHHHCC PSGKGALWIEMLSQPSE CCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA