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The map label for this gene is nudC [H]

Identifier: 66045689

GI number: 66045689

Start: 2841626

End: 2842462

Strand: Direct

Name: nudC [H]

Synonym: Psyr_2453

Alternate gene names: 66045689

Gene position: 2841626-2842462 (Clockwise)

Preceding gene: 66045688

Following gene: 66045696

Centisome position: 46.63

GC content: 61.77

Gene sequence:

>837_bases
ATGTCGCGCCCGGAGCGTTGGACAACTGCAGTTCTGGATGTCGAGGCCCCTGGCGGTTTGGCTGTGGTTCAGGGGGATCA
GGGTTTTTTGCTGGACGCCAATGGGGTGATGTTCCCCAGAGGCTGGTTAGCCGGGCAGGACCTGCCGGTGCAGAGCGAGC
ACGGCATCGGTTATTTCGAGGGTGAGCCTGTCTACTTGCTGGTGCTTGAGCGCTCGGTTGCCGTTGAGGGCTGCGCCTGG
CAAGGCTTGCGTCAGTTCATGCTGGAAGGCGATTTCGCTGTCTTCCAGATGCTCGGCTACGCCGCGCAGGTCAGCACATG
GGCCAGGGAGCACCGTTTCTGCGGTGCCTGCGGTCGTGCGACGGTGCAGATTCGCGGAGAGCGGGCGATGTTCTGCGAAC
ATGACAACCTGCGGCTGTACCCGCGTATTTCGCCAAGCATGATTGTGCTGGTTACCCGCGGCGATGAAATCCTGCTGGCC
CGCTCACCGCGGTTTGTCACCGGCATGTACAGCGCACTGGCCGGGTTCGTGGAGCCGGGTGAGTCTGCTGAAGACTGCGT
ACACCGCGAGGTGATGGAAGAGGTGCAGGTGCGCATCAAGAACCTCAGGTACCGGGGCAGCCAGTGCTGGCCGTTCCCGC
ACTCGATGATGCTCGGGTTTCATGCCGAATACGAAAGCGGCGAAATCGTGCCCCAGGCAGAAGAAATCGAAGACGCACGC
TGGTTTCATGTCGATGACCTGCCGCCGTTACCGGCCAATCGGTCGATTGCCCGTTACCTTATCGAGGCGTATCTGGCCGA
GCGTTCAGGCGCCCCCGAACCAGTGCTGCCAGGCTAG

Upstream 100 bases:

>100_bases
CTGACCTGAAGCTGGCGATGGCTGCGCAGATGAGCAAGCACAAGCCAGTCTTTGATAATTGATACATGACAAGGCTCGAG
TTTGAGCGAAGGAGTTTCTA

Downstream 100 bases:

>100_bases
GCGTACGGTCAGGCCCAGCACCACAGTGATGAACACCGGGCGGATGAATTTGGCTCCGCCCTTGATCGCGGTGCCTGCAC
CGAAGTAGGCACCGAGCATC

Product: NADH pyrophosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MSRPERWTTAVLDVEAPGGLAVVQGDQGFLLDANGVMFPRGWLAGQDLPVQSEHGIGYFEGEPVYLLVLERSVAVEGCAW
QGLRQFMLEGDFAVFQMLGYAAQVSTWAREHRFCGACGRATVQIRGERAMFCEHDNLRLYPRISPSMIVLVTRGDEILLA
RSPRFVTGMYSALAGFVEPGESAEDCVHREVMEEVQVRIKNLRYRGSQCWPFPHSMMLGFHAEYESGEIVPQAEEIEDAR
WFHVDDLPPLPANRSIARYLIEAYLAERSGAPEPVLPG

Sequences:

>Translated_278_residues
MSRPERWTTAVLDVEAPGGLAVVQGDQGFLLDANGVMFPRGWLAGQDLPVQSEHGIGYFEGEPVYLLVLERSVAVEGCAW
QGLRQFMLEGDFAVFQMLGYAAQVSTWAREHRFCGACGRATVQIRGERAMFCEHDNLRLYPRISPSMIVLVTRGDEILLA
RSPRFVTGMYSALAGFVEPGESAEDCVHREVMEEVQVRIKNLRYRGSQCWPFPHSMMLGFHAEYESGEIVPQAEEIEDAR
WFHVDDLPPLPANRSIARYLIEAYLAERSGAPEPVLPG
>Mature_277_residues
SRPERWTTAVLDVEAPGGLAVVQGDQGFLLDANGVMFPRGWLAGQDLPVQSEHGIGYFEGEPVYLLVLERSVAVEGCAWQ
GLRQFMLEGDFAVFQMLGYAAQVSTWAREHRFCGACGRATVQIRGERAMFCEHDNLRLYPRISPSMIVLVTRGDEILLAR
SPRFVTGMYSALAGFVEPGESAEDCVHREVMEEVQVRIKNLRYRGSQCWPFPHSMMLGFHAEYESGEIVPQAEEIEDARW
FHVDDLPPLPANRSIARYLIEAYLAERSGAPEPVLPG

Specific function: Unknown

COG id: COG2816

COG function: function code L; NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI50593112, Length=168, Percent_Identity=38.0952380952381, Blast_Score=115, Evalue=3e-26,
Organism=Homo sapiens, GI13899267, Length=190, Percent_Identity=36.8421052631579, Blast_Score=113, Evalue=2e-25,
Organism=Escherichia coli, GI48994995, Length=248, Percent_Identity=41.5322580645161, Blast_Score=181, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI212645999, Length=152, Percent_Identity=30.2631578947368, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71986510, Length=152, Percent_Identity=30.2631578947368, Blast_Score=72, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6321371, Length=166, Percent_Identity=30.1204819277108, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015375
- InterPro:   IPR022925
- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR015376 [H]

Pfam domain/function: PF00293 NUDIX; PF09296 NUDIX-like; PF09297 zf-NADH-PPase [H]

EC number: =3.6.1.22 [H]

Molecular weight: Translated: 31120; Mature: 30989

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRPERWTTAVLDVEAPGGLAVVQGDQGFLLDANGVMFPRGWLAGQDLPVQSEHGIGYFE
CCCCCCEEEEEEEEECCCCEEEEECCCCEEEECCCEECCCCCCCCCCCCCCCCCCCEEEC
GEPVYLLVLERSVAVEGCAWQGLRQFMLEGDFAVFQMLGYAAQVSTWAREHRFCGACGRA
CCCEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
TVQIRGERAMFCEHDNLRLYPRISPSMIVLVTRGDEILLARSPRFVTGMYSALAGFVEPG
EEEECCCEEEEEECCCEEEEECCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHCCCC
ESAEDCVHREVMEEVQVRIKNLRYRGSQCWPFPHSMMLGFHAEYESGEIVPQAEEIEDAR
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEEEECCCCCCCCCHHHHCCCC
WFHVDDLPPLPANRSIARYLIEAYLAERSGAPEPVLPG
EEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SRPERWTTAVLDVEAPGGLAVVQGDQGFLLDANGVMFPRGWLAGQDLPVQSEHGIGYFE
CCCCCEEEEEEEEECCCCEEEEECCCCEEEECCCEECCCCCCCCCCCCCCCCCCCEEEC
GEPVYLLVLERSVAVEGCAWQGLRQFMLEGDFAVFQMLGYAAQVSTWAREHRFCGACGRA
CCCEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
TVQIRGERAMFCEHDNLRLYPRISPSMIVLVTRGDEILLARSPRFVTGMYSALAGFVEPG
EEEECCCEEEEEECCCEEEEECCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHCCCC
ESAEDCVHREVMEEVQVRIKNLRYRGSQCWPFPHSMMLGFHAEYESGEIVPQAEEIEDAR
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHEEEEEECCCCCCCCCHHHHCCCC
WFHVDDLPPLPANRSIARYLIEAYLAERSGAPEPVLPG
EEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA