| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is por [H]
Identifier: 66045672
GI number: 66045672
Start: 2820460
End: 2821941
Strand: Reverse
Name: por [H]
Synonym: Psyr_2436
Alternate gene names: 66045672
Gene position: 2821941-2820460 (Counterclockwise)
Preceding gene: 66045673
Following gene: 66045671
Centisome position: 46.31
GC content: 58.5
Gene sequence:
>1482_bases ATGAAACTGAACAAAAACAATCTGTCCCGATTGGGCGCCGACATTGCCGTGCCCGCCTACACCGTCGAGAGCACTCGCCA GGGCATTGCCCACATCGGCGTCGGGGGCTTCCACCGGGCGCATCAGGCGTTTTATACCGATGCGCTGATGAACAGCGGCG AAGGCTTTGAATGGAGCATCTGCGGCGTGGGCCTGCGTCCTGAAGACAAGGTCGTGCGCGATGCACTGGCGCAACAGGAC TACCTGTACACGCTCTATGAACTGGGTGACACACCCGACACCAAAACCCGCATTATCGCCTCGATCAGCGGCATGCTGCT GGCCGACGACAGCCCGCAGGCGCTGATCGACAAACTGGCCAGCCCGGACATCCGCATCGTCTCGCTGACCATCACCGAAG GCGGTTACTGCATCGACGACAGCAACGGGCAGTTCATGGCCCATCTGCCGCAGATTCAACACGACCTGGCAAACCCGGAT CAGCCAACGACGGTCTTCGGCTTCCTCTGCGCCGCACTGGCCCGCCGCCGGGCGCAAGGTACGCCAGCCTTCACCCTGAT GTCCTGCGATAACCTGCCACACAACGGCGCGGTCACTCGCAAGGCATTGCTGGCATTTGCCACGTTGCGCGATGCCGATC TGCACGACTGGATCAAGGAAAACGTCAGTTTTCCCAACGCGATGGTCGACCGTATTACACCGATGACCAGCGCAGCCCAC CGGCTGCAACTGGCGGACGAGAAGCACATCGACGATGCCTGGCCAGTGGTCTGCGAACCGTTCGTGCAGTGGGTGCTGGA AGACAAGTTCGTCAATGGTCGCCCGGCGTGGGAAAAAGTCGGCGTGCAGTTCACCGATGACGTGACGCCCTATGAAGAGA TGAAGATCAAACTGCTTAACGGCAGTCATCTGGCATTGACCTACCTGGGCTTCCTGAAAGGTTATCGTTTTGTCCACGAA ACCATGAATGACCCGCTGTTCGTGAGCTATATCCGCACTTATATGGACCTGGACGTGACCCCGCAACTGGCGTCGGTGCC AGGTATCGATCTGGAAGGTTACAAGGACACCTTGATCGAGCGCTTTTCCAACCAGGCGATTGCCGACCAGCTGGAACGGG TCTGCTCGGACGGATCGTCGAAATTTCCCAAGTTCACCATTCCGACGATCAATCGTCTGATCGTCGATCAGGGCAATCTC GAACGCGCTTCGCTGGTCGTCGCTGCATGGGCGCTGTATCTGAAGGGGGTCGACGAAAACGGCACGACCTACACCATTCC TGACCCGCGTGCCGGGTTCTGTCAGGCGCTGGTGGCTGATGACACGCTTATTACTCAGCGCTTGTTGGCAGTGGAAGAAA TCTTTGGCTCGGCCATTCCGAAATCCGCAGCATTCGTGGCGGCCTTCGAGCAGAACCTCAATGATCTCCGCACACTGGGT GTGAGTGGCACACTGGAAAAACTTTTGGCCGCCAAGGCCTGA
Upstream 100 bases:
>100_bases TGCATCTCGACAGTGCCCAATGCCACCTGTTCGACGCTCAAGGTCTGGTGATTGCCAAAGCCTTGCAGACTGCCGCAGCC TGAGTCCCGGAGAGCCCGTC
Downstream 100 bases:
>100_bases GGGAATTCCCATGTTTCTTGGAATCGATTGCGGGACCCAGGGCACCAAGGTGCTGGTGCTCGACACCGAAAGCGGCACCG TGCTGGGCGAAGGCTCGGCG
Product: mannitol dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 493; Mature: 493
Protein sequence:
>493_residues MKLNKNNLSRLGADIAVPAYTVESTRQGIAHIGVGGFHRAHQAFYTDALMNSGEGFEWSICGVGLRPEDKVVRDALAQQD YLYTLYELGDTPDTKTRIIASISGMLLADDSPQALIDKLASPDIRIVSLTITEGGYCIDDSNGQFMAHLPQIQHDLANPD QPTTVFGFLCAALARRRAQGTPAFTLMSCDNLPHNGAVTRKALLAFATLRDADLHDWIKENVSFPNAMVDRITPMTSAAH RLQLADEKHIDDAWPVVCEPFVQWVLEDKFVNGRPAWEKVGVQFTDDVTPYEEMKIKLLNGSHLALTYLGFLKGYRFVHE TMNDPLFVSYIRTYMDLDVTPQLASVPGIDLEGYKDTLIERFSNQAIADQLERVCSDGSSKFPKFTIPTINRLIVDQGNL ERASLVVAAWALYLKGVDENGTTYTIPDPRAGFCQALVADDTLITQRLLAVEEIFGSAIPKSAAFVAAFEQNLNDLRTLG VSGTLEKLLAAKA
Sequences:
>Translated_493_residues MKLNKNNLSRLGADIAVPAYTVESTRQGIAHIGVGGFHRAHQAFYTDALMNSGEGFEWSICGVGLRPEDKVVRDALAQQD YLYTLYELGDTPDTKTRIIASISGMLLADDSPQALIDKLASPDIRIVSLTITEGGYCIDDSNGQFMAHLPQIQHDLANPD QPTTVFGFLCAALARRRAQGTPAFTLMSCDNLPHNGAVTRKALLAFATLRDADLHDWIKENVSFPNAMVDRITPMTSAAH RLQLADEKHIDDAWPVVCEPFVQWVLEDKFVNGRPAWEKVGVQFTDDVTPYEEMKIKLLNGSHLALTYLGFLKGYRFVHE TMNDPLFVSYIRTYMDLDVTPQLASVPGIDLEGYKDTLIERFSNQAIADQLERVCSDGSSKFPKFTIPTINRLIVDQGNL ERASLVVAAWALYLKGVDENGTTYTIPDPRAGFCQALVADDTLITQRLLAVEEIFGSAIPKSAAFVAAFEQNLNDLRTLG VSGTLEKLLAAKA >Mature_493_residues MKLNKNNLSRLGADIAVPAYTVESTRQGIAHIGVGGFHRAHQAFYTDALMNSGEGFEWSICGVGLRPEDKVVRDALAQQD YLYTLYELGDTPDTKTRIIASISGMLLADDSPQALIDKLASPDIRIVSLTITEGGYCIDDSNGQFMAHLPQIQHDLANPD QPTTVFGFLCAALARRRAQGTPAFTLMSCDNLPHNGAVTRKALLAFATLRDADLHDWIKENVSFPNAMVDRITPMTSAAH RLQLADEKHIDDAWPVVCEPFVQWVLEDKFVNGRPAWEKVGVQFTDDVTPYEEMKIKLLNGSHLALTYLGFLKGYRFVHE TMNDPLFVSYIRTYMDLDVTPQLASVPGIDLEGYKDTLIERFSNQAIADQLERVCSDGSSKFPKFTIPTINRLIVDQGNL ERASLVVAAWALYLKGVDENGTTYTIPDPRAGFCQALVADDTLITQRLLAVEEIFGSAIPKSAAFVAAFEQNLNDLRTLG VSGTLEKLLAAKA
Specific function: Unknown
COG id: COG0246
COG function: function code G; Mannitol-1-phosphate/altronate dehydrogenases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannitol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788497, Length=478, Percent_Identity=39.9581589958159, Blast_Score=346, Evalue=2e-96, Organism=Escherichia coli, GI1790779, Length=458, Percent_Identity=40.174672489083, Blast_Score=345, Evalue=4e-96, Organism=Escherichia coli, GI1787823, Length=488, Percent_Identity=38.7295081967213, Blast_Score=329, Evalue=2e-91, Organism=Escherichia coli, GI48994885, Length=419, Percent_Identity=25.2983293556086, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI1790028, Length=277, Percent_Identity=24.5487364620939, Blast_Score=70, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6324401, Length=489, Percent_Identity=43.3537832310838, Blast_Score=421, Evalue=1e-118, Organism=Saccharomyces cerevisiae, GI6320765, Length=489, Percent_Identity=43.3537832310838, Blast_Score=421, Evalue=1e-118,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR000669 - InterPro: IPR013118 - InterPro: IPR013131 - InterPro: IPR016040 [H]
Pfam domain/function: PF01232 Mannitol_dh; PF08125 Mannitol_dh_C [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 54360; Mature: 54360
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS00974 MANNITOL_DHGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLNKNNLSRLGADIAVPAYTVESTRQGIAHIGVGGFHRAHQAFYTDALMNSGEGFEWSI CCCCHHHHHHHCCCCCCCEEEHHHHHCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEE CGVGLRPEDKVVRDALAQQDYLYTLYELGDTPDTKTRIIASISGMLLADDSPQALIDKLA EECCCCCHHHHHHHHHHHCCHHEEEECCCCCCCHHHHHHHHHCCEEEECCCHHHHHHHHC SPDIRIVSLTITEGGYCIDDSNGQFMAHLPQIQHDLANPDQPTTVFGFLCAALARRRAQG CCCEEEEEEEEECCCEEEECCCCCEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC TPAFTLMSCDNLPHNGAVTRKALLAFATLRDADLHDWIKENVSFPNAMVDRITPMTSAAH CCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCHHHHHHH RLQLADEKHIDDAWPVVCEPFVQWVLEDKFVNGRPAWEKVGVQFTDDVTPYEEMKIKLLN HHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEECCCCCHHHEEEEEEC GSHLALTYLGFLKGYRFVHETMNDPLFVSYIRTYMDLDVTPQLASVPGIDLEGYKDTLIE CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHH RFSNQAIADQLERVCSDGSSKFPKFTIPTINRLIVDQGNLERASLVVAAWALYLKGVDEN HHCCHHHHHHHHHHHCCCCCCCCEEECCCHHHHEECCCCCHHHHHHHHHHHHHHHCCCCC GTTYTIPDPRAGFCQALVADDTLITQRLLAVEEIFGSAIPKSAAFVAAFEQNLNDLRTLG CCEEECCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC VSGTLEKLLAAKA CCHHHHHHHHCCC >Mature Secondary Structure MKLNKNNLSRLGADIAVPAYTVESTRQGIAHIGVGGFHRAHQAFYTDALMNSGEGFEWSI CCCCHHHHHHHCCCCCCCEEEHHHHHCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEE CGVGLRPEDKVVRDALAQQDYLYTLYELGDTPDTKTRIIASISGMLLADDSPQALIDKLA EECCCCCHHHHHHHHHHHCCHHEEEECCCCCCCHHHHHHHHHCCEEEECCCHHHHHHHHC SPDIRIVSLTITEGGYCIDDSNGQFMAHLPQIQHDLANPDQPTTVFGFLCAALARRRAQG CCCEEEEEEEEECCCEEEECCCCCEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC TPAFTLMSCDNLPHNGAVTRKALLAFATLRDADLHDWIKENVSFPNAMVDRITPMTSAAH CCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCHHHHHHH RLQLADEKHIDDAWPVVCEPFVQWVLEDKFVNGRPAWEKVGVQFTDDVTPYEEMKIKLLN HHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEECCCCCHHHEEEEEEC GSHLALTYLGFLKGYRFVHETMNDPLFVSYIRTYMDLDVTPQLASVPGIDLEGYKDTLIE CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHH RFSNQAIADQLERVCSDGSSKFPKFTIPTINRLIVDQGNLERASLVVAAWALYLKGVDEN HHCCHHHHHHHHHHHCCCCCCCCEEECCCHHHHEECCCCCHHHHHHHHHHHHHHHCCCCC GTTYTIPDPRAGFCQALVADDTLITQRLLAVEEIFGSAIPKSAAFVAAFEQNLNDLRTLG CCEEECCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC VSGTLEKLLAAKA CCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA