| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is pbuE [H]
Identifier: 66045657
GI number: 66045657
Start: 2803152
End: 2804306
Strand: Direct
Name: pbuE [H]
Synonym: Psyr_2421
Alternate gene names: 66045657
Gene position: 2803152-2804306 (Clockwise)
Preceding gene: 66045656
Following gene: 66045659
Centisome position: 46.0
GC content: 62.42
Gene sequence:
>1155_bases ATGTTGTTGCCCATCCTTCTGCTGTCAGCCGCCGGGTTTACCGTGCTGACCACAGAATTCGTCATCGTCGGTCTTTTGCC AGCGGTTGCCCGCGACCTGAATGTCACGGTCTCCCAGGCAGGTCTGCTGGTGACGCTGTTTGCGTTTACCGTCGCCGCCT TTGGTCCTTTTCTGACCGCCTATTTTTCGCGCTTCGAGCGCAAGCGCTTGTTTGTCAGCATCCTGGTGCTGTTCGGCTTT GCAAATGTCCTGGCGGCGCTGGCGCCCAATATCGCCGTGATGGGGATCGCCCGGCTGATTCCTGCGTTGGGGTTACCGGT GTTCTGGGCGCTGGCCAGCGAGACCGCCGTGGACATTGTCGGTCCGCAGTTCGCAGGCCGGGCAATTGCCAGGATCGGTT TCGGCATCGTTTGCGCCACGGTATTCGGCATTCCCATCGGCACCCTGATCTCCGATGCCTTCGGCTGGCGCACGGCCTTT CTGGTTCTGGCCGCTCTGGCGTTCGCCAAGGCACTGTTGCTGACGGTCTATCTGCCGAAGACGGCTGCCAGGCAGAACCC GGTATCGATCCTTAAGCAGTTCGGCATCTTGCGCAGCCGGATGATGCAGGGGCACGTGCTGCTCTCGGTGCTGGTGTTCA GCGGCATGTTCACGGCCTATACCTATCTGGCGGACATGCTCGAGCGTCTTGCCGGTTTCGACGGCGCTCTGGTGGGCTGG TGCCTGATGGGCTTTGGCGCTGTCGGCTTGCTGGGCAACTCGCTGGGCGGGCGCATGGTCGACCGCCATCCGTTGATTGC CAGCCTGGTGTTCTGCGCATTCATGGTGGTTGGCATGGTCGCGGTGGTGCCGAGCATCCATTCGGTGGTGGCCTTGTCAC TCGCGCTGGCGGTCTGGGGTATCACCCAGGCGGCCTTGTTTCTGGTCAGTCATGTGCGGTTGATCAAGGCCGCGCCGCAA GCGCCTGCGTTCGCGGCGTCACTGAACATCGCTGGTGCCAACCTCGGCATTGGCATCGGCGCGGTGATCGGCGGCAGGGT CATTGATCACCTGGGGCTGGGCAACGTCGGTTTTGCCGCTGCGGGCATCATTGTGCTGGCGATTGTGCTGGCGCTGCTGT TGATCAAGCGTGATCCGGGGCCGCTCCCGGCTTAG
Upstream 100 bases:
>100_bases AGTGCGAAACATTGGCGTGACAGTCATCTTCAAGCTACTTTAATCCCCCTCCCGCAGGCCGCGCTGTTGCAGCGGGCTCT GTTGTTGTTCTGGAGTATTC
Downstream 100 bases:
>100_bases CCAGCATCGGTAAACAGCTGATTCCGAGCACTTTCGGCAATGGCGACGACGCCGGGGTGCTTGACCTTGCGCTCCACGGT GATGGCGTAGAACGATTCGG
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MLLPILLLSAAGFTVLTTEFVIVGLLPAVARDLNVTVSQAGLLVTLFAFTVAAFGPFLTAYFSRFERKRLFVSILVLFGF ANVLAALAPNIAVMGIARLIPALGLPVFWALASETAVDIVGPQFAGRAIARIGFGIVCATVFGIPIGTLISDAFGWRTAF LVLAALAFAKALLLTVYLPKTAARQNPVSILKQFGILRSRMMQGHVLLSVLVFSGMFTAYTYLADMLERLAGFDGALVGW CLMGFGAVGLLGNSLGGRMVDRHPLIASLVFCAFMVVGMVAVVPSIHSVVALSLALAVWGITQAALFLVSHVRLIKAAPQ APAFAASLNIAGANLGIGIGAVIGGRVIDHLGLGNVGFAAAGIIVLAIVLALLLIKRDPGPLPA
Sequences:
>Translated_384_residues MLLPILLLSAAGFTVLTTEFVIVGLLPAVARDLNVTVSQAGLLVTLFAFTVAAFGPFLTAYFSRFERKRLFVSILVLFGF ANVLAALAPNIAVMGIARLIPALGLPVFWALASETAVDIVGPQFAGRAIARIGFGIVCATVFGIPIGTLISDAFGWRTAF LVLAALAFAKALLLTVYLPKTAARQNPVSILKQFGILRSRMMQGHVLLSVLVFSGMFTAYTYLADMLERLAGFDGALVGW CLMGFGAVGLLGNSLGGRMVDRHPLIASLVFCAFMVVGMVAVVPSIHSVVALSLALAVWGITQAALFLVSHVRLIKAAPQ APAFAASLNIAGANLGIGIGAVIGGRVIDHLGLGNVGFAAAGIIVLAIVLALLLIKRDPGPLPA >Mature_384_residues MLLPILLLSAAGFTVLTTEFVIVGLLPAVARDLNVTVSQAGLLVTLFAFTVAAFGPFLTAYFSRFERKRLFVSILVLFGF ANVLAALAPNIAVMGIARLIPALGLPVFWALASETAVDIVGPQFAGRAIARIGFGIVCATVFGIPIGTLISDAFGWRTAF LVLAALAFAKALLLTVYLPKTAARQNPVSILKQFGILRSRMMQGHVLLSVLVFSGMFTAYTYLADMLERLAGFDGALVGW CLMGFGAVGLLGNSLGGRMVDRHPLIASLVFCAFMVVGMVAVVPSIHSVVALSLALAVWGITQAALFLVSHVRLIKAAPQ APAFAASLNIAGANLGIGIGAVIGGRVIDHLGLGNVGFAAAGIIVLAIVLALLLIKRDPGPLPA
Specific function: Involved in the efflux of purine ribonucleosides, such as guanosine, adenosine and inosine, as well as purine bases guanine, adenine and hypoxanthine, and purine base analogs 2,6- diaminopurine and 6-mercaptopurine. Therefore plays a role in maintaining t
COG id: COG2814
COG function: function code G; Arabinose efflux permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. DHA1 family. PbuE (TC 2.A.1.2.25) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787947, Length=327, Percent_Identity=29.0519877675841, Blast_Score=138, Evalue=5e-34, Organism=Escherichia coli, GI1787808, Length=379, Percent_Identity=27.7044854881267, Blast_Score=116, Evalue=3e-27, Organism=Escherichia coli, GI145693198, Length=350, Percent_Identity=26, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1786595, Length=380, Percent_Identity=26.0526315789474, Blast_Score=86, Evalue=5e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 39989; Mature: 39989
Theoretical pI: Translated: 10.86; Mature: 10.86
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLPILLLSAAGFTVLTTEFVIVGLLPAVARDLNVTVSQAGLLVTLFAFTVAAFGPFLTA CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH YFSRFERKRLFVSILVLFGFANVLAALAPNIAVMGIARLIPALGLPVFWALASETAVDIV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHCCHHHHC GPQFAGRAIARIGFGIVCATVFGIPIGTLISDAFGWRTAFLVLAALAFAKALLLTVYLPK CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH TAARQNPVSILKQFGILRSRMMQGHVLLSVLVFSGMFTAYTYLADMLERLAGFDGALVGW HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH CLMGFGAVGLLGNSLGGRMVDRHPLIASLVFCAFMVVGMVAVVPSIHSVVALSLALAVWG HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITQAALFLVSHVRLIKAAPQAPAFAASLNIAGANLGIGIGAVIGGRVIDHLGLGNVGFAA HHHHHHHHHHHHHHHHCCCCCCCHHHHCEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHH AGIIVLAIVLALLLIKRDPGPLPA HHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLLPILLLSAAGFTVLTTEFVIVGLLPAVARDLNVTVSQAGLLVTLFAFTVAAFGPFLTA CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH YFSRFERKRLFVSILVLFGFANVLAALAPNIAVMGIARLIPALGLPVFWALASETAVDIV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHCCHHHHC GPQFAGRAIARIGFGIVCATVFGIPIGTLISDAFGWRTAFLVLAALAFAKALLLTVYLPK CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH TAARQNPVSILKQFGILRSRMMQGHVLLSVLVFSGMFTAYTYLADMLERLAGFDGALVGW HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH CLMGFGAVGLLGNSLGGRMVDRHPLIASLVFCAFMVVGMVAVVPSIHSVVALSLALAVWG HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ITQAALFLVSHVRLIKAAPQAPAFAASLNIAGANLGIGIGAVIGGRVIDHLGLGNVGFAA HHHHHHHHHHHHHHHHCCCCCCCHHHHCEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHH AGIIVLAIVLALLLIKRDPGPLPA HHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA