| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045656
Identifier: 66045656
GI number: 66045656
Start: 2802359
End: 2802868
Strand: Direct
Name: 66045656
Synonym: Psyr_2420
Alternate gene names: NA
Gene position: 2802359-2802868 (Clockwise)
Preceding gene: 66045654
Following gene: 66045657
Centisome position: 45.99
GC content: 57.06
Gene sequence:
>510_bases ATGTCTATTTCCCTGTACGCCGCTTCCATTCCTGTCTTTCAGCAAATGCTCAACGCGCTGAGCGACGTTCTGACCAAAGC CGAAGCTTACGCGACCGAGAAGAAAATCCAGCCACCAGCCCTGCTGCAGGCGCGTCTGTTCCCGGACATGCTGCCGTTTA CCCGTCAGGTGCAGATCGCTGTCGATTTTGCCAAGGGTGCGTCGGCGCGTCTGGCAGGCGTCGAGATCCCGCAGTACGAT GACACCGAAACCACCTTTGCCGAGTTGCAGGCACTGCTTGCCAGGACACTCGCGTTCATCGGCAGCATCACTCCTGATCA GGTCGACGGCAAGGAAGGCATCGAAATCGTCCTGCGCCCCGGCACTGAAAAGGAAAAACGCCTGAACGGTCAGGCCTATC TGCTCAGCTACGCCTTGCCGCAGTTCTTCTTTCACGTCACGACTGCCTACGATCTGCTGCGCCATAACGGCGTTGAAATC GGCAAGCGCGATTTTATGGGCAAGTTCTAA
Upstream 100 bases:
>100_bases GCCAGCGTCTGCTGCACGGATCTGCAGGGGCGCTGAAAAGTGTCACGGCGTTTGGCGTCGTGTGGGTCTATAATTGCGCC TTTCTCAATCAGGATATGTC
Downstream 100 bases:
>100_bases ACAGTGCGGGGCTGAGACCTGGTTGATGGTCTCGGCCCCCGGCGTTATACACAAAGCCAACTGACTATCGTGCCAATGCT CTGCGTTGGCATGCATTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MSISLYAASIPVFQQMLNALSDVLTKAEAYATEKKIQPPALLQARLFPDMLPFTRQVQIAVDFAKGASARLAGVEIPQYD DTETTFAELQALLARTLAFIGSITPDQVDGKEGIEIVLRPGTEKEKRLNGQAYLLSYALPQFFFHVTTAYDLLRHNGVEI GKRDFMGKF
Sequences:
>Translated_169_residues MSISLYAASIPVFQQMLNALSDVLTKAEAYATEKKIQPPALLQARLFPDMLPFTRQVQIAVDFAKGASARLAGVEIPQYD DTETTFAELQALLARTLAFIGSITPDQVDGKEGIEIVLRPGTEKEKRLNGQAYLLSYALPQFFFHVTTAYDLLRHNGVEI GKRDFMGKF >Mature_168_residues SISLYAASIPVFQQMLNALSDVLTKAEAYATEKKIQPPALLQARLFPDMLPFTRQVQIAVDFAKGASARLAGVEIPQYDD TETTFAELQALLARTLAFIGSITPDQVDGKEGIEIVLRPGTEKEKRLNGQAYLLSYALPQFFFHVTTAYDLLRHNGVEIG KRDFMGKF
Specific function: Unknown
COG id: COG3812
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18772; Mature: 18641
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISLYAASIPVFQQMLNALSDVLTKAEAYATEKKIQPPALLQARLFPDMLPFTRQVQIA CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEE VDFAKGASARLAGVEIPQYDDTETTFAELQALLARTLAFIGSITPDQVDGKEGIEIVLRP EEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECC GTEKEKRLNGQAYLLSYALPQFFFHVTTAYDLLRHNGVEIGKRDFMGKF CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCC >Mature Secondary Structure SISLYAASIPVFQQMLNALSDVLTKAEAYATEKKIQPPALLQARLFPDMLPFTRQVQIA CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEE VDFAKGASARLAGVEIPQYDDTETTFAELQALLARTLAFIGSITPDQVDGKEGIEIVLRP EEECCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECC GTEKEKRLNGQAYLLSYALPQFFFHVTTAYDLLRHNGVEIGKRDFMGKF CCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA