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The map label for this gene is yddH [H]

Identifier: 66045629

GI number: 66045629

Start: 2774871

End: 2775455

Strand: Direct

Name: yddH [H]

Synonym: Psyr_2393

Alternate gene names: 66045629

Gene position: 2774871-2775455 (Clockwise)

Preceding gene: 66045627

Following gene: 66045631

Centisome position: 45.54

GC content: 59.32

Gene sequence:

>585_bases
GTGGACAATCATATTCGTCCTGTCGAGCTGGAAAAAGCCTACCGTTTGCTCAACCACGGGCCGACCGTGCTGGTCTCATC
CAGCCACGAGGGCACGCATAACGTCATGGCTGCGGCCTGGGCCTGTGCGCTGGACTTCTCGCCACCGAAGGTAACGCTGG
TCATCGACAAGATGACCAAGACCCGCGGACTGGTGGAGAAGAGCGGCTACTTTGCCCTGCAGGTGCCCAATCTGGATCAA
TTGCAGATGACCTTCGACGTCGGCACCCAGAGCAAGGTCTTCACTCCGGACAAGCTGGACAAGGCCAATGTGGACCTGTT
TCGCATCGACGGGCATGACTCGCCGCTGGTGGCCGGTTGTTCGGCCTGGCTGATCTGCAAGATCATTCCCGAGCCGCACA
ATCAGCAGACTTATGACCTGTTCATTGGCGAAGTGGTGGGCGCCTGGGCTGACAACCGCGTGTTCAACGACGGGCACTGG
GAATTCGAAAAGGCCGACCCGAAATGGCGCAGCCTGCATTACGTCGCGGGCGGGCATTTCTATACGATCGGTGAGCCTGC
GGTGGTGGATACGGGCGACGAGTAA

Upstream 100 bases:

>100_bases
GTTTGCGCGGCGTACCCTGCAGTTCTGCCGATGCACGCACAATGCCTTATTTCGCTGCCTTGCCGGTAGCGGCACGAATC
ATGTTTTTCGAGGGTTTCAA

Downstream 100 bases:

>100_bases
TCGCGATGTCTGGCCCTGACGATCCTCGCCGACCGTAAGGGCCTCTTCGTGAGCAAGCTCACTCCCACACAAGCACACTC
ATTGCTCCCACAGATGGCTC

Product: flavin reductase-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MDNHIRPVELEKAYRLLNHGPTVLVSSSHEGTHNVMAAAWACALDFSPPKVTLVIDKMTKTRGLVEKSGYFALQVPNLDQ
LQMTFDVGTQSKVFTPDKLDKANVDLFRIDGHDSPLVAGCSAWLICKIIPEPHNQQTYDLFIGEVVGAWADNRVFNDGHW
EFEKADPKWRSLHYVAGGHFYTIGEPAVVDTGDE

Sequences:

>Translated_194_residues
MDNHIRPVELEKAYRLLNHGPTVLVSSSHEGTHNVMAAAWACALDFSPPKVTLVIDKMTKTRGLVEKSGYFALQVPNLDQ
LQMTFDVGTQSKVFTPDKLDKANVDLFRIDGHDSPLVAGCSAWLICKIIPEPHNQQTYDLFIGEVVGAWADNRVFNDGHW
EFEKADPKWRSLHYVAGGHFYTIGEPAVVDTGDE
>Mature_194_residues
MDNHIRPVELEKAYRLLNHGPTVLVSSSHEGTHNVMAAAWACALDFSPPKVTLVIDKMTKTRGLVEKSGYFALQVPNLDQ
LQMTFDVGTQSKVFTPDKLDKANVDLFRIDGHDSPLVAGCSAWLICKIIPEPHNQQTYDLFIGEVVGAWADNRVFNDGHW
EFEKADPKWRSLHYVAGGHFYTIGEPAVVDTGDE

Specific function: Unknown

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flavoredoxin family [H]

Homologues:

Organism=Escherichia coli, GI87081916, Length=182, Percent_Identity=41.7582417582418, Blast_Score=138, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: NA

Molecular weight: Translated: 21649; Mature: 21649

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNHIRPVELEKAYRLLNHGPTVLVSSSHEGTHNVMAAAWACALDFSPPKVTLVIDKMTK
CCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHEEEEEEECCCCCEEEEEEECCCC
TRGLVEKSGYFALQVPNLDQLQMTFDVGTQSKVFTPDKLDKANVDLFRIDGHDSPLVAGC
CCCCEECCCEEEEECCCCCEEEEEEECCCCCEEECCCCCCCCCCEEEEECCCCCCEEECC
SAWLICKIIPEPHNQQTYDLFIGEVVGAWADNRVFNDGHWEFEKADPKWRSLHYVAGGHF
CEEEEEEECCCCCCCCEEEEEEEHHHCCCCCCCEECCCCEEEECCCCCCEEEEEEECCEE
YTIGEPAVVDTGDE
EECCCCEEEECCCC
>Mature Secondary Structure
MDNHIRPVELEKAYRLLNHGPTVLVSSSHEGTHNVMAAAWACALDFSPPKVTLVIDKMTK
CCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHEEEEEEECCCCCEEEEEEECCCC
TRGLVEKSGYFALQVPNLDQLQMTFDVGTQSKVFTPDKLDKANVDLFRIDGHDSPLVAGC
CCCCEECCCEEEEECCCCCEEEEEEECCCCCEEECCCCCCCCCCEEEEECCCCCCEEECC
SAWLICKIIPEPHNQQTYDLFIGEVVGAWADNRVFNDGHWEFEKADPKWRSLHYVAGGHF
CEEEEEEECCCCCCCCEEEEEEEHHHCCCCCCCEECCCCEEEECCCCCCEEEEEEECCEE
YTIGEPAVVDTGDE
EECCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]