Click here to switch to the map view.

The map label for this gene is yagT [H]

Identifier: 66045624

GI number: 66045624

Start: 2769265

End: 2769945

Strand: Direct

Name: yagT [H]

Synonym: Psyr_2388

Alternate gene names: 66045624

Gene position: 2769265-2769945 (Clockwise)

Preceding gene: 66045619

Following gene: 66045625

Centisome position: 45.44

GC content: 60.94

Gene sequence:

>681_bases
ATGACCGAACCCAAGAAGCACAAGGAAACTGCTGGCGACAGCAGTACCGTGCAGCCCTCACGCCGAAACTTTCTGAAGTT
CGGTGCCTCCGGCATTGCTGCGGCCACGCTGTCTACCTGGATCCCCTCCGACGGCATGCTGCAGGCGACGCCTCTGGCAC
CTGCGGCCCCCGTGGTCGAAGACAGTGACGCGCCCGCAGCGGGTGAGCAGCGCATCCAGTTGAAGGTCAATGGCCAGGTT
CATACCCTGAACGTGCCGGCCAATGCCGTTCTGCTCGATGTGCTGCGTGACCGCCTGCAACTGACGGGCACCAAGAAAGG
CTGCGATCACGGCCAATGCGGCGCCTGCACGTTGTTGGTCAACGGCGTGGCGATCAACTCCTGTCTGTCGATCGCCGTTC
AGCATCAGGGCGACAGCATTACCACCATCGAAGGGCTGGCCGAGAACGGCAAGCTGCACCCGGTACAGGAAGCGTTCTGG
GAACACGATGCCTACCAGTGTGGTTATTGCACCTCCGGACAGATCATGAGCGCGGTCGCGATTCTCAAGGATCCGAACAT
TGCGTCCGACGACGCCAGCGTCAGAGAGGCCATGAGCGGCAATATCTGCCGTTGCGGTGCCTACAAGAACATTCTGTCTG
CCGTGCAATCTGCGCGCTCGAAAATGGGAGGTGCTGCCTGA

Upstream 100 bases:

>100_bases
TAAAGGCAGCACGTCAGTGAGCAGGAGTACGCCCGGGCCGCTGACCACACCATAACGCCCGTCGCTTTACAGCAGCGACG
GCTATTACCGAGTGATCCTG

Downstream 100 bases:

>100_bases
TGCGAACTTTCGACTACGCTCGCGCCGCTTCGCCCGCGCAGGCTTTCAGCACAGCGTCCGGTGATGGGCAACGCTTCTAT
CTGGCCGGCGGCACCACGCT

Product: twin-arginine translocation pathway signal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MTEPKKHKETAGDSSTVQPSRRNFLKFGASGIAAATLSTWIPSDGMLQATPLAPAAPVVEDSDAPAAGEQRIQLKVNGQV
HTLNVPANAVLLDVLRDRLQLTGTKKGCDHGQCGACTLLVNGVAINSCLSIAVQHQGDSITTIEGLAENGKLHPVQEAFW
EHDAYQCGYCTSGQIMSAVAILKDPNIASDDASVREAMSGNICRCGAYKNILSAVQSARSKMGGAA

Sequences:

>Translated_226_residues
MTEPKKHKETAGDSSTVQPSRRNFLKFGASGIAAATLSTWIPSDGMLQATPLAPAAPVVEDSDAPAAGEQRIQLKVNGQV
HTLNVPANAVLLDVLRDRLQLTGTKKGCDHGQCGACTLLVNGVAINSCLSIAVQHQGDSITTIEGLAENGKLHPVQEAFW
EHDAYQCGYCTSGQIMSAVAILKDPNIASDDASVREAMSGNICRCGAYKNILSAVQSARSKMGGAA
>Mature_225_residues
TEPKKHKETAGDSSTVQPSRRNFLKFGASGIAAATLSTWIPSDGMLQATPLAPAAPVVEDSDAPAAGEQRIQLKVNGQVH
TLNVPANAVLLDVLRDRLQLTGTKKGCDHGQCGACTLLVNGVAINSCLSIAVQHQGDSITTIEGLAENGKLHPVQEAFWE
HDAYQCGYCTSGQIMSAVAILKDPNIASDDASVREAMSGNICRCGAYKNILSAVQSARSKMGGAA

Specific function: Iron-sulfur subunit of the xanthine dehydrogenase complex [H]

COG id: COG2080

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI91823271, Length=160, Percent_Identity=33.75, Blast_Score=72, Evalue=3e-13,
Organism=Escherichia coli, GI1786480, Length=170, Percent_Identity=54.7058823529412, Blast_Score=188, Evalue=2e-49,
Organism=Escherichia coli, GI1789232, Length=145, Percent_Identity=40.6896551724138, Blast_Score=112, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17540638, Length=156, Percent_Identity=38.4615384615385, Blast_Score=105, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI32566215, Length=167, Percent_Identity=35.3293413173653, Blast_Score=101, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17539860, Length=160, Percent_Identity=35, Blast_Score=99, Evalue=1e-21,
Organism=Drosophila melanogaster, GI17737937, Length=157, Percent_Identity=37.5796178343949, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24647193, Length=159, Percent_Identity=33.3333333333333, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24647195, Length=160, Percent_Identity=33.75, Blast_Score=87, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24647197, Length=160, Percent_Identity=33.75, Blast_Score=87, Evalue=7e-18,
Organism=Drosophila melanogaster, GI24647199, Length=153, Percent_Identity=32.6797385620915, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24647201, Length=152, Percent_Identity=32.2368421052632, Blast_Score=83, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002888
- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]

EC number: NA

Molecular weight: Translated: 23643; Mature: 23512

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEPKKHKETAGDSSTVQPSRRNFLKFGASGIAAATLSTWIPSDGMLQATPLAPAAPVVE
CCCCCCHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCC
DSDAPAAGEQRIQLKVNGQVHTLNVPANAVLLDVLRDRLQLTGTKKGCDHGQCGACTLLV
CCCCCCCCCEEEEEEECCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE
NGVAINSCLSIAVQHQGDSITTIEGLAENGKLHPVQEAFWEHDAYQCGYCTSGQIMSAVA
CCHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHH
ILKDPNIASDDASVREAMSGNICRCGAYKNILSAVQSARSKMGGAA
HHCCCCCCCCCHHHHHHHCCCEEECHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TEPKKHKETAGDSSTVQPSRRNFLKFGASGIAAATLSTWIPSDGMLQATPLAPAAPVVE
CCCCCHHHCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCC
DSDAPAAGEQRIQLKVNGQVHTLNVPANAVLLDVLRDRLQLTGTKKGCDHGQCGACTLLV
CCCCCCCCCEEEEEEECCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEE
NGVAINSCLSIAVQHQGDSITTIEGLAENGKLHPVQEAFWEHDAYQCGYCTSGQIMSAVA
CCHHHHHHHHHHHCCCCCCEEEEHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHH
ILKDPNIASDDASVREAMSGNICRCGAYKNILSAVQSARSKMGGAA
HHCCCCCCCCCHHHHHHHCCCEEECHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]