| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is yecE [H]
Identifier: 66045619
GI number: 66045619
Start: 2761819
End: 2762553
Strand: Direct
Name: yecE [H]
Synonym: Psyr_2383
Alternate gene names: 66045619
Gene position: 2761819-2762553 (Clockwise)
Preceding gene: 66045618
Following gene: 66045624
Centisome position: 45.32
GC content: 60.41
Gene sequence:
>735_bases ATGCCGCCAGTTTATATCGGTTGTGCAGGCTGGAGCCTTGCGCGTGAGTACTGGCCCGACTTTCCTGAACAAGGCAGCCA TTTGCAACGCTATGCTTCGCGCTTCAACGCGGTCGAGATCAACAGCTCGTTCTATCGCCCTCATCGCGCTCAGACCTACG CACGCTGGGCGCAGGCGGTGCCCGCCGGGTTTCGCTTCTCGGTCAAGATGCCGAAACTCATTACCCACGAACACCGACTG CGCGAGTGCGAGACCGTTCTGACCACGTTCCTTTCTCAATGCACTGCGCTGGGTGACAAACTGGGCTGTCTGCTGGTCCA GCTTCCGCCCTCTCTGGACTATGCACCGCAGGTAGCTGAGAGGTTTTTCAGAGCATTACGCAATCAGTACGCCGGCAGCG TGGTATTGGAACCGCGCCATGAATCCTGGCGGCAGGCTCAGGCGCTGCTGATCGAGCATCGCATTGCGCAGGTAGCCGCC GATCCGTCAGTAATCAGTGAAGGGCACTTGCCCGGTGGGTGGCAGGGTGCTCACTACTGGCGCCTGCACGGTGCGCCGAA AATTTATCACAGTGCCTATTCCGTCGAGCATCTGGAAGGTTTGGCTGGGCGAGCGTCGGCGTCTGTGGCGCGGGAAATCG AGACCTGGTGCATCTTTGACAATACGGCCAGCGGAGCCGCCGTCCGTGACGCGCTCGCGCTGCAGGCACTGGTTGAGCGC AACAGGGCTGGGTAA
Upstream 100 bases:
>100_bases ATCGGAAGCAATTCGAGAAGCGACTCTGCGAGTTTGCCGGTGTCGGCCCCAAGACTGTTGAGATATTCATGCGCGAAGCC GGCAAGGTGCTGTATTGATT
Downstream 100 bases:
>100_bases TAGGTGCGAACGGGTGCAGTGCTCAGACCTCAAGCAGCTCACTCAACGCTTCGCTCAGTTGCTCGGCACTGAACGGCTTG GCGACGCAACGCCGGTTGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MPPVYIGCAGWSLAREYWPDFPEQGSHLQRYASRFNAVEINSSFYRPHRAQTYARWAQAVPAGFRFSVKMPKLITHEHRL RECETVLTTFLSQCTALGDKLGCLLVQLPPSLDYAPQVAERFFRALRNQYAGSVVLEPRHESWRQAQALLIEHRIAQVAA DPSVISEGHLPGGWQGAHYWRLHGAPKIYHSAYSVEHLEGLAGRASASVAREIETWCIFDNTASGAAVRDALALQALVER NRAG
Sequences:
>Translated_244_residues MPPVYIGCAGWSLAREYWPDFPEQGSHLQRYASRFNAVEINSSFYRPHRAQTYARWAQAVPAGFRFSVKMPKLITHEHRL RECETVLTTFLSQCTALGDKLGCLLVQLPPSLDYAPQVAERFFRALRNQYAGSVVLEPRHESWRQAQALLIEHRIAQVAA DPSVISEGHLPGGWQGAHYWRLHGAPKIYHSAYSVEHLEGLAGRASASVAREIETWCIFDNTASGAAVRDALALQALVER NRAG >Mature_243_residues PPVYIGCAGWSLAREYWPDFPEQGSHLQRYASRFNAVEINSSFYRPHRAQTYARWAQAVPAGFRFSVKMPKLITHEHRLR ECETVLTTFLSQCTALGDKLGCLLVQLPPSLDYAPQVAERFFRALRNQYAGSVVLEPRHESWRQAQALLIEHRIAQVAAD PSVISEGHLPGGWQGAHYWRLHGAPKIYHSAYSVEHLEGLAGRASASVAREIETWCIFDNTASGAAVRDALALQALVERN RAG
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0759 family [H]
Homologues:
Organism=Escherichia coli, GI1788175, Length=107, Percent_Identity=33.6448598130841, Blast_Score=67, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002763 [H]
Pfam domain/function: PF01904 DUF72 [H]
EC number: NA
Molecular weight: Translated: 27365; Mature: 27234
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPVYIGCAGWSLAREYWPDFPEQGSHLQRYASRFNAVEINSSFYRPHRAQTYARWAQAV CCCEEEECCCHHHHHHHCCCCCCCCHHHHHHHHHCCEEEECCHHCCCHHHHHHHHHHHHC PAGFRFSVKMPKLITHEHRLRECETVLTTFLSQCTALGDKLGCLLVQLPPSLDYAPQVAE CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHH RFFRALRNQYAGSVVLEPRHESWRQAQALLIEHRIAQVAADPSVISEGHLPGGWQGAHYW HHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCEEE RLHGAPKIYHSAYSVEHLEGLAGRASASVAREIETWCIFDNTASGAAVRDALALQALVER EECCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHH NRAG CCCC >Mature Secondary Structure PPVYIGCAGWSLAREYWPDFPEQGSHLQRYASRFNAVEINSSFYRPHRAQTYARWAQAV CCEEEECCCHHHHHHHCCCCCCCCHHHHHHHHHCCEEEECCHHCCCHHHHHHHHHHHHC PAGFRFSVKMPKLITHEHRLRECETVLTTFLSQCTALGDKLGCLLVQLPPSLDYAPQVAE CCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCHHHHH RFFRALRNQYAGSVVLEPRHESWRQAQALLIEHRIAQVAADPSVISEGHLPGGWQGAHYW HHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCEEE RLHGAPKIYHSAYSVEHLEGLAGRASASVAREIETWCIFDNTASGAAVRDALALQALVER EECCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHH NRAG CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]