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The map label for this gene is 66045601

Identifier: 66045601

GI number: 66045601

Start: 2742650

End: 2743870

Strand: Reverse

Name: 66045601

Synonym: Psyr_2365

Alternate gene names: NA

Gene position: 2743870-2742650 (Counterclockwise)

Preceding gene: 66045605

Following gene: 66045600

Centisome position: 45.03

GC content: 62.41

Gene sequence:

>1221_bases
ATGCAGCTTATCGACAAGCTCAGCATTCTGGCAGACGCCGCCAAGTACGATGCGTCGTGCGCGAGTAGTGGAGCACCCAA
GCGCAGCTCGCAGGACAAGTCCGGGCTCGGTTCCACCAATGGCATGGGCATCTGCCACAGCTATACGCCGGACGGGCGTT
GCGTGTCGCTGCTGAAAATCCTCCTGACCAACTTCTGTCTTTACGACTGCCAGTACTGCGTCAACCGTCGCTCCAGCGAT
GTGCCCCGTGCGCGCTTCACTCCCGAAGAAGTGGTCACCCTGACCCTGGACTTCTATCGCCGCAATTGCGTGAGCGGGCT
GTTTTTGAGTTCCGGGATCATTCGCTCCGCGGACTACACCATGGAGCAACTGGTCGAAGTTGCCCGGCTGTTGCGCGAGG
TGCATGAGTTTCGCGGCTACATCCACCTCAAGACCATCCCTGACGCCGATCCGGCGCTGATCGAAAAGGCCGGCCGCTAC
GCCGACCGTCTCAGCGTCAACATCGAGCTGCCAACTGACCTGAGCCTGCAGACCCTGGCCCCGGAAAAAGACGTCGCGTC
GATCAAGCAGGCCATGCAGACGATTTACACCGGTGAGCAGACGGTGCGCAACGAGCCTCGCTCGCCGCGCTTTGCGCCTG
CCGGGCAGAGCACGCAGATGATTGTCGGTGCCGATGCCACCGACGACAGCACCATCCTGCACAGCGCGCAGTCGCTGTAC
AGCAACTTCAAGCTGCGCCGGGTCTACTATTCTGCGTTCAGCCCGATACCCAACAGCCCCAACAGCGTTCCCCTGGCGGC
ACCGCCTCTGATGCGCGAGCATCGCCTGTATCAGGCTGACTTTCTGCTGCGCGGCTATGGTTTTACCGCGGGTGAACTGC
TCGACGGCCCCGGTGATCTGGCGCTGGACATCGACCCTAAACTGGCGTGGGCGCTGGGCAACCGCCAGGTTTTCCCGCTG
GACCTGAACCAGGCGGACCCGGCGCTGATCGCCAGGGTGCCGGGTATTGGCATCCGCACCACGCAGCGGCTGGTCGAGCT
GCGCAGACAGCGACGCATCCGCTACGAAGACCTCACCCGCATGCGCTGCATACTGGCCAAGGCCAAGCCGTTCATCATTA
CCAGTGATTACCACCCGCCGCACGCGGAAACCACCAGCGAGTTCCTGCATCACCAGTTGCGCGACCGGCCTCAGCCTCAG
CAAATGGGCCTGTGGGGATGA

Upstream 100 bases:

>100_bases
CGAATCCGCTTCGGCATCGCCTTGCAGAACTCCGCCGTGCGGTACTTGTGACAAGACACGCGCCCCTATACTGTATATAC
AAACAGTCAAGGGGCACTTC

Downstream 100 bases:

>100_bases
TCTGCCTCGACTGCGACGACCTGTTCGAGACCTGGCGACAACAGGCTCGCTGGCTGTTGAGCCATGAAATCGACCCCAGC
CAGGTCAGCTGGAAGTCGCC

Product: radical SAM family protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Radical SAM Family Protein; Elongator /MiaB/NifB; Radical Sam Domain Protein; Radical SAM; Radical SAM Superfamily Protein; Biotin Synthase Related Domain-Containing Protein; Biotin Synthase Related Domain Containing Protein; Elongator Protein; Radical SAM Methylase Protein; Helix-Hairpin-Helix Motif; Radical SAM Protein

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MQLIDKLSILADAAKYDASCASSGAPKRSSQDKSGLGSTNGMGICHSYTPDGRCVSLLKILLTNFCLYDCQYCVNRRSSD
VPRARFTPEEVVTLTLDFYRRNCVSGLFLSSGIIRSADYTMEQLVEVARLLREVHEFRGYIHLKTIPDADPALIEKAGRY
ADRLSVNIELPTDLSLQTLAPEKDVASIKQAMQTIYTGEQTVRNEPRSPRFAPAGQSTQMIVGADATDDSTILHSAQSLY
SNFKLRRVYYSAFSPIPNSPNSVPLAAPPLMREHRLYQADFLLRGYGFTAGELLDGPGDLALDIDPKLAWALGNRQVFPL
DLNQADPALIARVPGIGIRTTQRLVELRRQRRIRYEDLTRMRCILAKAKPFIITSDYHPPHAETTSEFLHHQLRDRPQPQ
QMGLWG

Sequences:

>Translated_406_residues
MQLIDKLSILADAAKYDASCASSGAPKRSSQDKSGLGSTNGMGICHSYTPDGRCVSLLKILLTNFCLYDCQYCVNRRSSD
VPRARFTPEEVVTLTLDFYRRNCVSGLFLSSGIIRSADYTMEQLVEVARLLREVHEFRGYIHLKTIPDADPALIEKAGRY
ADRLSVNIELPTDLSLQTLAPEKDVASIKQAMQTIYTGEQTVRNEPRSPRFAPAGQSTQMIVGADATDDSTILHSAQSLY
SNFKLRRVYYSAFSPIPNSPNSVPLAAPPLMREHRLYQADFLLRGYGFTAGELLDGPGDLALDIDPKLAWALGNRQVFPL
DLNQADPALIARVPGIGIRTTQRLVELRRQRRIRYEDLTRMRCILAKAKPFIITSDYHPPHAETTSEFLHHQLRDRPQPQ
QMGLWG
>Mature_406_residues
MQLIDKLSILADAAKYDASCASSGAPKRSSQDKSGLGSTNGMGICHSYTPDGRCVSLLKILLTNFCLYDCQYCVNRRSSD
VPRARFTPEEVVTLTLDFYRRNCVSGLFLSSGIIRSADYTMEQLVEVARLLREVHEFRGYIHLKTIPDADPALIEKAGRY
ADRLSVNIELPTDLSLQTLAPEKDVASIKQAMQTIYTGEQTVRNEPRSPRFAPAGQSTQMIVGADATDDSTILHSAQSLY
SNFKLRRVYYSAFSPIPNSPNSVPLAAPPLMREHRLYQADFLLRGYGFTAGELLDGPGDLALDIDPKLAWALGNRQVFPL
DLNQADPALIARVPGIGIRTTQRLVELRRQRRIRYEDLTRMRCILAKAKPFIITSDYHPPHAETTSEFLHHQLRDRPQPQ
QMGLWG

Specific function: Unknown

COG id: COG4277

COG function: function code R; Predicted DNA-binding protein with the Helix-hairpin-helix motif

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45429; Mature: 45429

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLIDKLSILADAAKYDASCASSGAPKRSSQDKSGLGSTNGMGICHSYTPDGRCVSLLKI
CCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHH
LLTNFCLYDCQYCVNRRSSDVPRARFTPEEVVTLTLDFYRRNCVSGLFLSSGIIRSADYT
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEEEEHHHHHHHHHHHHHHHCCCCCCCHHH
MEQLVEVARLLREVHEFRGYIHLKTIPDADPALIEKAGRYADRLSVNIELPTDLSLQTLA
HHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHCCHHHHEEEEEECCCCCCHHHCC
PEKDVASIKQAMQTIYTGEQTVRNEPRSPRFAPAGQSTQMIVGADATDDSTILHSAQSLY
CCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
SNFKLRRVYYSAFSPIPNSPNSVPLAAPPLMREHRLYQADFLLRGYGFTAGELLDGPGDL
HCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCHHHHCCCCCCE
ALDIDPKLAWALGNRQVFPLDLNQADPALIARVPGIGIRTTQRLVELRRQRRIRYEDLTR
EEECCCCEEEECCCCEEEEEECCCCCCHHEEECCCCCHHHHHHHHHHHHHHCCCHHHHHH
MRCILAKAKPFIITSDYHPPHAETTSEFLHHQLRDRPQPQQMGLWG
HHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCC
>Mature Secondary Structure
MQLIDKLSILADAAKYDASCASSGAPKRSSQDKSGLGSTNGMGICHSYTPDGRCVSLLKI
CCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHH
LLTNFCLYDCQYCVNRRSSDVPRARFTPEEVVTLTLDFYRRNCVSGLFLSSGIIRSADYT
HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEEEEHHHHHHHHHHHHHHHCCCCCCCHHH
MEQLVEVARLLREVHEFRGYIHLKTIPDADPALIEKAGRYADRLSVNIELPTDLSLQTLA
HHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHCCHHHHEEEEEECCCCCCHHHCC
PEKDVASIKQAMQTIYTGEQTVRNEPRSPRFAPAGQSTQMIVGADATDDSTILHSAQSLY
CCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
SNFKLRRVYYSAFSPIPNSPNSVPLAAPPLMREHRLYQADFLLRGYGFTAGELLDGPGDL
HCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCHHHHCCCCCCE
ALDIDPKLAWALGNRQVFPLDLNQADPALIARVPGIGIRTTQRLVELRRQRRIRYEDLTR
EEECCCCEEEECCCCEEEEEECCCCCCHHEEECCCCCHHHHHHHHHHHHHHCCCHHHHHH
MRCILAKAKPFIITSDYHPPHAETTSEFLHHQLRDRPQPQQMGLWG
HHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA