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The map label for this gene is yddE [C]

Identifier: 66045599

GI number: 66045599

Start: 2740803

End: 2741645

Strand: Direct

Name: yddE [C]

Synonym: Psyr_2363

Alternate gene names: 66045599

Gene position: 2740803-2741645 (Clockwise)

Preceding gene: 66045597

Following gene: 66045602

Centisome position: 44.98

GC content: 62.4

Gene sequence:

>843_bases
ATGCGCTCGTTCGATTTCAAGCAACTGGATGTCTTCACTGATCAGCCTCTGCTCGGCAATCCGCTGGCGGCGGTGCTGGG
CGCTGACGGGCTGAGTGACGAGCAGATGGCCGCCTTTGCCCGCTGGACCAACCTGAGTGAGACCACGTTTCTGCTCAAGC
CGACAGACCCGCGTGCCGACTATCGCGTGCGTATTTTCACCACCCTTGAAGAGCTGCCGTTCGCTGGCCATCCCACCCTG
GGCAGTTGCCACGCCTGGCTGGAAAGCGGTGGCGTGCCTCGCGGTGAGGAAATCATTCAGGAATGCGGCATCGGCCTGGT
GCGTATCCGCAAGGATGCCGCCGGGCTGGCATTTACCGCGCCGCCGCTGTTGCGCTCAGGCGCCGTGGACGCCACGTTTG
TCGAGCGGATTCGCCTCGGTCTGAAGCTGGCTTCCGAGAGCATTCTGGACGCCCGCTGGGTCGATAATGGCCCTGGCTGG
GTCGCACTGCGGCTGAAAGATCGTGCAACCGTTCTTGCTCTGCAGCCTGACCATGTTCAACTGGACGGCTTGAAAATCGG
CGTTATCGGAGCGTGGGACGCTGATGTGGACGGTGTAGATGCCCAATTCGAGGTGCGTGCGTTTGTTTCCGGCGACGGTA
TGGCTGAAGACCCGGTGACCGGCAGTCTCAATGCCGGCATCGCTCGCTGGTTCCTGGAGGAAGGCCTGGCACCGGAGCGC
TATGTCGTGAGTCAGGGCACTGCGCTCGGACGCAAGGGGCGGGTGTCCGTTCAGCGTGCAGGTGAGGATATCTGGGTAGG
CGGCTCGACTGTGACGTGCATCGACGGAAGGGTTACGCTCTAG

Upstream 100 bases:

>100_bases
ACAGCTGTGAGCCGCCGTGGCCGACGTTGGTTCAATATCCCGTTGTTCACCCGGCTGTGGACGTGGCACTCTGGTTTTTT
ATACCGGAAAGGACGCCCCG

Downstream 100 bases:

>100_bases
AGGATCGGGCTGGAAAGCCCCATGTGCGAGATACAGGCAGCACCAAAGCCTTAGACTCCTTTGCCCTTGATACCAGGCAG
CAGATGTGTGACGCGGAGCG

Product: phenazine biosynthesis PhzC/PhzF protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MRSFDFKQLDVFTDQPLLGNPLAAVLGADGLSDEQMAAFARWTNLSETTFLLKPTDPRADYRVRIFTTLEELPFAGHPTL
GSCHAWLESGGVPRGEEIIQECGIGLVRIRKDAAGLAFTAPPLLRSGAVDATFVERIRLGLKLASESILDARWVDNGPGW
VALRLKDRATVLALQPDHVQLDGLKIGVIGAWDADVDGVDAQFEVRAFVSGDGMAEDPVTGSLNAGIARWFLEEGLAPER
YVVSQGTALGRKGRVSVQRAGEDIWVGGSTVTCIDGRVTL

Sequences:

>Translated_280_residues
MRSFDFKQLDVFTDQPLLGNPLAAVLGADGLSDEQMAAFARWTNLSETTFLLKPTDPRADYRVRIFTTLEELPFAGHPTL
GSCHAWLESGGVPRGEEIIQECGIGLVRIRKDAAGLAFTAPPLLRSGAVDATFVERIRLGLKLASESILDARWVDNGPGW
VALRLKDRATVLALQPDHVQLDGLKIGVIGAWDADVDGVDAQFEVRAFVSGDGMAEDPVTGSLNAGIARWFLEEGLAPER
YVVSQGTALGRKGRVSVQRAGEDIWVGGSTVTCIDGRVTL
>Mature_280_residues
MRSFDFKQLDVFTDQPLLGNPLAAVLGADGLSDEQMAAFARWTNLSETTFLLKPTDPRADYRVRIFTTLEELPFAGHPTL
GSCHAWLESGGVPRGEEIIQECGIGLVRIRKDAAGLAFTAPPLLRSGAVDATFVERIRLGLKLASESILDARWVDNGPGW
VALRLKDRATVLALQPDHVQLDGLKIGVIGAWDADVDGVDAQFEVRAFVSGDGMAEDPVTGSLNAGIARWFLEEGLAPER
YVVSQGTALGRKGRVSVQRAGEDIWVGGSTVTCIDGRVTL

Specific function: Unknown

COG id: COG0384

COG function: function code R; Predicted epimerase, PhzC/PhzF homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phzF family [H]

Homologues:

Organism=Escherichia coli, GI1787737, Length=272, Percent_Identity=30.5147058823529, Blast_Score=95, Evalue=6e-21,
Organism=Saccharomyces cerevisiae, GI6321818, Length=294, Percent_Identity=34.0136054421769, Blast_Score=172, Evalue=5e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003719 [H]

Pfam domain/function: PF02567 PhzC-PhzF [H]

EC number: NA

Molecular weight: Translated: 30185; Mature: 30185

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSFDFKQLDVFTDQPLLGNPLAAVLGADGLSDEQMAAFARWTNLSETTFLLKPTDPRAD
CCCCCCCEEEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCC
YRVRIFTTLEELPFAGHPTLGSCHAWLESGGVPRGEEIIQECGIGLVRIRKDAAGLAFTA
EEEEEEEEHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEECCCCCEEEC
PPLLRSGAVDATFVERIRLGLKLASESILDARWVDNGPGWVALRLKDRATVLALQPDHVQ
CHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEECCEEEEEECCCCEE
LDGLKIGVIGAWDADVDGVDAQFEVRAFVSGDGMAEDPVTGSLNAGIARWFLEEGLAPER
ECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCE
YVVSQGTALGRKGRVSVQRAGEDIWVGGSTVTCIDGRVTL
EEEECCCCCCCCCCEEEEECCCEEEECCCEEEEECCEEEC
>Mature Secondary Structure
MRSFDFKQLDVFTDQPLLGNPLAAVLGADGLSDEQMAAFARWTNLSETTFLLKPTDPRAD
CCCCCCCEEEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCC
YRVRIFTTLEELPFAGHPTLGSCHAWLESGGVPRGEEIIQECGIGLVRIRKDAAGLAFTA
EEEEEEEEHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCEEEEEECCCCCEEEC
PPLLRSGAVDATFVERIRLGLKLASESILDARWVDNGPGWVALRLKDRATVLALQPDHVQ
CHHHHCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEECCEEEEEECCCCEE
LDGLKIGVIGAWDADVDGVDAQFEVRAFVSGDGMAEDPVTGSLNAGIARWFLEEGLAPER
ECCEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCE
YVVSQGTALGRKGRVSVQRAGEDIWVGGSTVTCIDGRVTL
EEEECCCCCCCCCCEEEEECCCEEEECCCEEEEECCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]