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The map label for this gene is ureD1

Identifier: 66045435

GI number: 66045435

Start: 2552951

End: 2553808

Strand: Reverse

Name: ureD1

Synonym: Psyr_2195

Alternate gene names: 66045435

Gene position: 2553808-2552951 (Counterclockwise)

Preceding gene: 66045436

Following gene: 66045431

Centisome position: 41.91

GC content: 62.94

Gene sequence:

>858_bases
ATGAACGCCCATCAATCGTCACTGCCCGCACAGACGAAACGCACGGCACATATTGCCTTCAGCAAAGCGCCTTCCGGGGC
CAGTTATGTGTCTCGTCAGGAAGTCGGCTACCCCTTCCATCTGGGACGTACCCTGACCCTGCCACAAGACCCGCCCGGCA
TGGCGGCGGTCTACCTGCAATCGTGTTCGGGAGGCCTGTTCGCCGGGGAACAACTGCACCTGCATCTGCACGCAGGACCA
GGCACCCAAGTGCACGTCAGCACCGGCGCTGCGACGGTCGCGCACAGCATGCTCGAGCAGTCGGCGCGGCAGACCGTGAC
ACTGGTCGCCGAAGCCGATGCGCTGCTGGAGTACCTGCCGATGGCCACCATTCTGTTTCCACAGACGCGGCTGCATAGCC
AGGTAAACGTAACGTTGCACCCCGGTGCAAGAGTGCTGCTGTGCGACGCATTCTGCCTGCATACACCTCACGGCAGCGAG
GGACTGCCCGACTTTTACCGCGCCGACCTGCAGGTCTACAGCCCGGCCGGAAAACTGTTGGCCGGTGACCGACTGGCAAT
TACCGGCGCAGACCTGCAACGCCGACTGCCCGGCGTGAGCGGACAACGGCAAGCCTTGGCAACGTTCATGCTGGTGGGTC
AGGGTTTGCCGATAGAGGATTTGAAACGGACGTTGCGCGAAACGTTACGGGACGTTGCCGATAGCTACCAGGGCGTCAGC
GCACTGCCGAACGATTGCGGCGTGTCCGTACGCGTGATGAGCGCCGATGCAGTGGCGTTGCGTAATGCGCTGCATCTGGC
CTGGGCGTGCGTTCGGCAGCAATTGACAGGACTTGCGCCGCGGGTGCGGCGCAAGTGA

Upstream 100 bases:

>100_bases
CGCGCAACGGCCAGCCGGTGCTGTTTACCAACTGCAACACCGGCGAAGGCGTCGACGCGGTGGTGGACGCGATAAGCCGT
GCCGTGTTGTTCGACCGCAC

Downstream 100 bases:

>100_bases
GCAGCCAGGCCGTTGCAGAGCACTTTCCAGGCTCAAACGACTTACAACTTGCCTTCCCAGCGCCGAAAGAGAACGCTGGC
ATTGACTCCGCCGAATCCGG

Product: urease accessory protein UreD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MNAHQSSLPAQTKRTAHIAFSKAPSGASYVSRQEVGYPFHLGRTLTLPQDPPGMAAVYLQSCSGGLFAGEQLHLHLHAGP
GTQVHVSTGAATVAHSMLEQSARQTVTLVAEADALLEYLPMATILFPQTRLHSQVNVTLHPGARVLLCDAFCLHTPHGSE
GLPDFYRADLQVYSPAGKLLAGDRLAITGADLQRRLPGVSGQRQALATFMLVGQGLPIEDLKRTLRETLRDVADSYQGVS
ALPNDCGVSVRVMSADAVALRNALHLAWACVRQQLTGLAPRVRRK

Sequences:

>Translated_285_residues
MNAHQSSLPAQTKRTAHIAFSKAPSGASYVSRQEVGYPFHLGRTLTLPQDPPGMAAVYLQSCSGGLFAGEQLHLHLHAGP
GTQVHVSTGAATVAHSMLEQSARQTVTLVAEADALLEYLPMATILFPQTRLHSQVNVTLHPGARVLLCDAFCLHTPHGSE
GLPDFYRADLQVYSPAGKLLAGDRLAITGADLQRRLPGVSGQRQALATFMLVGQGLPIEDLKRTLRETLRDVADSYQGVS
ALPNDCGVSVRVMSADAVALRNALHLAWACVRQQLTGLAPRVRRK
>Mature_285_residues
MNAHQSSLPAQTKRTAHIAFSKAPSGASYVSRQEVGYPFHLGRTLTLPQDPPGMAAVYLQSCSGGLFAGEQLHLHLHAGP
GTQVHVSTGAATVAHSMLEQSARQTVTLVAEADALLEYLPMATILFPQTRLHSQVNVTLHPGARVLLCDAFCLHTPHGSE
GLPDFYRADLQVYSPAGKLLAGDRLAITGADLQRRLPGVSGQRQALATFMLVGQGLPIEDLKRTLRETLRDVADSYQGVS
ALPNDCGVSVRVMSADAVALRNALHLAWACVRQQLTGLAPRVRRK

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter

COG id: COG0829

COG function: function code O; Urease accessory protein UreH

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URED1_PSEU2 (Q4ZUD4)

Other databases:

- EMBL:   CP000075
- RefSeq:   YP_235276.1
- STRING:   Q4ZUD4
- GeneID:   3367710
- GenomeReviews:   CP000075_GR
- KEGG:   psb:Psyr_2195
- eggNOG:   COG0829
- HOGENOM:   HBG643750
- OMA:   PYPFHIT
- ProtClustDB:   CLSK265065
- BioCyc:   PSYR205918:PSYR_2195-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01384
- InterPro:   IPR002669

Pfam domain/function: PF01774 UreD

EC number: NA

Molecular weight: Translated: 30575; Mature: 30575

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAHQSSLPAQTKRTAHIAFSKAPSGASYVSRQEVGYPFHLGRTLTLPQDPPGMAAVYLQ
CCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCEECCCEEECCCCCCCHHHHHEE
SCSGGLFAGEQLHLHLHAGPGTQVHVSTGAATVAHSMLEQSARQTVTLVAEADALLEYLP
CCCCCCEECCEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHH
MATILFPQTRLHSQVNVTLHPGARVLLCDAFCLHTPHGSEGLPDFYRADLQVYSPAGKLL
HHHHHCCHHHHCCEEEEEECCCCEEEEEEHHHHCCCCCCCCCCHHHHCCEEEECCCCCEE
AGDRLAITGADLQRRLPGVSGQRQALATFMLVGQGLPIEDLKRTLRETLRDVADSYQGVS
ECCEEEEECCHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
ALPNDCGVSVRVMSADAVALRNALHLAWACVRQQLTGLAPRVRRK
CCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCC
>Mature Secondary Structure
MNAHQSSLPAQTKRTAHIAFSKAPSGASYVSRQEVGYPFHLGRTLTLPQDPPGMAAVYLQ
CCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCEECCCEEECCCCCCCHHHHHEE
SCSGGLFAGEQLHLHLHAGPGTQVHVSTGAATVAHSMLEQSARQTVTLVAEADALLEYLP
CCCCCCEECCEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHH
MATILFPQTRLHSQVNVTLHPGARVLLCDAFCLHTPHGSEGLPDFYRADLQVYSPAGKLL
HHHHHCCHHHHCCEEEEEECCCCEEEEEEHHHHCCCCCCCCCCHHHHCCEEEECCCCCEE
AGDRLAITGADLQRRLPGVSGQRQALATFMLVGQGLPIEDLKRTLRETLRDVADSYQGVS
ECCEEEEECCHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC
ALPNDCGVSVRVMSADAVALRNALHLAWACVRQQLTGLAPRVRRK
CCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA