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The map label for this gene is comD [H]

Identifier: 66045418

GI number: 66045418

Start: 2531148

End: 2531687

Strand: Reverse

Name: comD [H]

Synonym: Psyr_2178

Alternate gene names: 66045418

Gene position: 2531687-2531148 (Counterclockwise)

Preceding gene: 66045419

Following gene: 66045417

Centisome position: 41.55

GC content: 60.37

Gene sequence:

>540_bases
ATGTCAACAGAAGCTGAACACACCGTGGGACAGAATTGGCAAGAGGACGTGTTCCGCGTGCTCAAGGCCCACGACGTCAA
ACACGTGGTCTTCGTACCGGATGCAGGCCACTCGGCGGCGATCCGCATGTCGTATGCGGACCCGGACATCAAGGCCGTTG
TCCTCACCACCGAGGAAGAAGGCATCGGCTATCTCGCCGGCGCATGGCTTGGTGGAGAGCGTGGTGCCCTCCTGATGCAA
TCCAGCGGAGTCGGTAACTGCATCAACACTCTCGCTCTGCAAGTCTGCGCAGGCTTTCCGCTGTTGATGGTGGTCACAAT
GCGCGGCGACTGGGCCGAATTCAACGCGTGGCAGAACCCGATGGGCCAGGCCACAGAAGCCTCCCTGAATCTGATGAAAG
TGATGACCTGGCGCGCGGACGTCCCGGAAGACGTCGCCCCGTTGCTGCACGGTGCCGCGACCATGGCCTTCAACGGTGAT
TCGTCCACTGCCCTGCTGCTCGGCCAGCGCCTGATTGGAGAAAAGAAATGGGTCAAGTAA

Upstream 100 bases:

>100_bases
AAATGGGCATATCTCAAAGACAAAAACGGTAGTCGTCCTTCTCCTCCATCCCTCCCAGAATGGGTGAAAACACAAAAGCA
GCACTGCTTGGGAGATTTGC

Downstream 100 bases:

>100_bases
GCGCAAACCACACTCTGTGCCGCCGCGAAGTGGTCAAGGCCTTACTGGCCGACCGCAAAGACGTGCTGGTCGTGACGGGG
CTGGGCTCCGCGTCCTATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MSTEAEHTVGQNWQEDVFRVLKAHDVKHVVFVPDAGHSAAIRMSYADPDIKAVVLTTEEEGIGYLAGAWLGGERGALLMQ
SSGVGNCINTLALQVCAGFPLLMVVTMRGDWAEFNAWQNPMGQATEASLNLMKVMTWRADVPEDVAPLLHGAATMAFNGD
SSTALLLGQRLIGEKKWVK

Sequences:

>Translated_179_residues
MSTEAEHTVGQNWQEDVFRVLKAHDVKHVVFVPDAGHSAAIRMSYADPDIKAVVLTTEEEGIGYLAGAWLGGERGALLMQ
SSGVGNCINTLALQVCAGFPLLMVVTMRGDWAEFNAWQNPMGQATEASLNLMKVMTWRADVPEDVAPLLHGAATMAFNGD
SSTALLLGQRLIGEKKWVK
>Mature_178_residues
STEAEHTVGQNWQEDVFRVLKAHDVKHVVFVPDAGHSAAIRMSYADPDIKAVVLTTEEEGIGYLAGAWLGGERGALLMQS
SGVGNCINTLALQVCAGFPLLMVVTMRGDWAEFNAWQNPMGQATEASLNLMKVMTWRADVPEDVAPLLHGAATMAFNGDS
STALLLGQRLIGEKKWVK

Specific function: Catalyzes the decarboxylation of sulfopyruvic acid to sulfoacetaldehyde [H]

COG id: COG4032

COG function: function code R; Predicted thiamine-pyrophosphate-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022502
- InterPro:   IPR012001 [H]

Pfam domain/function: PF02776 TPP_enzyme_N [H]

EC number: =4.1.1.79 [H]

Molecular weight: Translated: 19368; Mature: 19237

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTEAEHTVGQNWQEDVFRVLKAHDVKHVVFVPDAGHSAAIRMSYADPDIKAVVLTTEEE
CCCCCCCHHCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCEEEEEEEECCC
GIGYLAGAWLGGERGALLMQSSGVGNCINTLALQVCAGFPLLMVVTMRGDWAEFNAWQNP
CCEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCCCC
MGQATEASLNLMKVMTWRADVPEDVAPLLHGAATMAFNGDSSTALLLGQRLIGEKKWVK
CCCCHHHHHHHHHHEECCCCCCHHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
STEAEHTVGQNWQEDVFRVLKAHDVKHVVFVPDAGHSAAIRMSYADPDIKAVVLTTEEE
CCCCCCHHCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCEEEEEEEECCC
GIGYLAGAWLGGERGALLMQSSGVGNCINTLALQVCAGFPLLMVVTMRGDWAEFNAWQNP
CCEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHCCCCCC
MGQATEASLNLMKVMTWRADVPEDVAPLLHGAATMAFNGDSSTALLLGQRLIGEKKWVK
CCCCHHHHHHHHHHEECCCCCCHHHHHHHHCCEEEEECCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 10940029 [H]