| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is kgtP [H]
Identifier: 66045419
GI number: 66045419
Start: 2532242
End: 2533618
Strand: Reverse
Name: kgtP [H]
Synonym: Psyr_2179
Alternate gene names: 66045419
Gene position: 2533618-2532242 (Counterclockwise)
Preceding gene: 66045429
Following gene: 66045418
Centisome position: 41.58
GC content: 54.68
Gene sequence:
>1377_bases ATGTCTGCATCAACCAGCGACTCAACACGCCACACTGAAAAGTCCGATCAGATGAAAAGTCCGAATCGTGTCAGAGCCAT CATGGGTGCCTGCTCGGGCAATCTGGTGGAGTGGTACGACTTTTTCATTTACGCCTATACCGCCATCTATTTTGCGAGCT CGTTTTTCCCCAAAGGCGACACCACCAGTCAGTTGCTCGCAACCGCCGGCGTCTTCGCCGTCGGCTTTTTCATGCGGCCG CTCGGCGGTTGGATTTTTGGCTGGATTGCTGATACCCGCGGCCGCAAGGTATCGATGATTATCTCGGTGTTCATGATGTG CGCCGGTTCCTTGTTGATTGCCGTCATGCCGACCTATGAAACCATCGGTGTGGCGGCGCCAGTTTTGCTTGTCGTTGCCA GGCTGATTCAGGGTCTGTCAGTCGGCGCGGAGTACGGCACCGGCGCCACCTACATCAGTGAAATCGCGACACCTGGGCGT CGTTGTTTCTATGGATCATTCCAGTACTTCACCATCATCGCAGGCCAACTCCTCGCCCTGATGACCGTGGTCATACTTCA ACAAACCCTTACCGGCGAGGAATTGCGGGAATGGGGCTGGAGAATTCCTTTTTTCATCGGCGCCTTTAGTTCTATCGTAG TCGTGTATTTGCGTCGCGCGATGCATGAAACCGCCACAAAAAAAGAAATGAACCGCAAAGATGCCGGCTCGCTACGTGGC ATGTTCAAACACAAACGCGCAGTGGCACTGGTGGTCGCGTTTACCATTGGCGGTTCACTTTACTTCTACACCTTCACCAC CTACATGCAGAAATTTCTGGTGATCTCTGCGGGGTTTAGTCCGGAAACGGTGAGCTTCATCATGACGGCCGCCCTGGTCG GTTTCATGTTTTGTCAGCCACTCTTTGGTCTGCTCGCCGACCGAATCGGAATCAAGGTCCATATGTTGTTGTTTTCCGGG TTGGCCATGCTACTGGTGATCCCCCTGCTCTATTCACTGCAATCAGTCAGCAGTCCATTTACAGCGTTCCTGCTGGTATT TGGCGGCCTGGCAATCGCGTCGCTCTACACCCCGATTGCCGGTATCGTCAAAGCTGAACTGTTCCCGCCAGCGGTACGTG CATTGGGTGTGGGCTTTCCTTATGCCGTCGGCAACGCGGCATTCGGTGGCACCGCCGAATACGTCGCCTTGTCGCTTCGG TCGCAGGGTATTGAGGAGTATTTCTTCTTCTACGTCGCGGCCGTAGTAACCATCACGTTCATCGCAGCGACGCTAATGCC CAACCTGTCCCGCTATGGTTACATCAGCGGCTCGGGTGAGATCGAAGAACGCACCGGACTGAGGGGCTGCATCAAATCGC AGGCTGCCAGGATCTGA
Upstream 100 bases:
>100_bases CAGCACTTGCGTTAAGCACATCAACCCATCGAGCTAGCAACGTCGGACACGCATCAGCGTGGGCCTCGTATCGTCTCGCC TTGAAACAAGGGTGAACAAA
Downstream 100 bases:
>100_bases GGCACTGACGATTACCGTGGTTTTTTGAAAGGGCCCATGATGATCCATGGGCCCTTTTAAAATCACTGGATAGCGGATAC CGATGCTACTTGTGATGAAT
Product: major facilitator transporter
Products: Proton [Cytoplasm]; 2-oxoglutarate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 458; Mature: 457
Protein sequence:
>458_residues MSASTSDSTRHTEKSDQMKSPNRVRAIMGACSGNLVEWYDFFIYAYTAIYFASSFFPKGDTTSQLLATAGVFAVGFFMRP LGGWIFGWIADTRGRKVSMIISVFMMCAGSLLIAVMPTYETIGVAAPVLLVVARLIQGLSVGAEYGTGATYISEIATPGR RCFYGSFQYFTIIAGQLLALMTVVILQQTLTGEELREWGWRIPFFIGAFSSIVVVYLRRAMHETATKKEMNRKDAGSLRG MFKHKRAVALVVAFTIGGSLYFYTFTTYMQKFLVISAGFSPETVSFIMTAALVGFMFCQPLFGLLADRIGIKVHMLLFSG LAMLLVIPLLYSLQSVSSPFTAFLLVFGGLAIASLYTPIAGIVKAELFPPAVRALGVGFPYAVGNAAFGGTAEYVALSLR SQGIEEYFFFYVAAVVTITFIAATLMPNLSRYGYISGSGEIEERTGLRGCIKSQAARI
Sequences:
>Translated_458_residues MSASTSDSTRHTEKSDQMKSPNRVRAIMGACSGNLVEWYDFFIYAYTAIYFASSFFPKGDTTSQLLATAGVFAVGFFMRP LGGWIFGWIADTRGRKVSMIISVFMMCAGSLLIAVMPTYETIGVAAPVLLVVARLIQGLSVGAEYGTGATYISEIATPGR RCFYGSFQYFTIIAGQLLALMTVVILQQTLTGEELREWGWRIPFFIGAFSSIVVVYLRRAMHETATKKEMNRKDAGSLRG MFKHKRAVALVVAFTIGGSLYFYTFTTYMQKFLVISAGFSPETVSFIMTAALVGFMFCQPLFGLLADRIGIKVHMLLFSG LAMLLVIPLLYSLQSVSSPFTAFLLVFGGLAIASLYTPIAGIVKAELFPPAVRALGVGFPYAVGNAAFGGTAEYVALSLR SQGIEEYFFFYVAAVVTITFIAATLMPNLSRYGYISGSGEIEERTGLRGCIKSQAARI >Mature_457_residues SASTSDSTRHTEKSDQMKSPNRVRAIMGACSGNLVEWYDFFIYAYTAIYFASSFFPKGDTTSQLLATAGVFAVGFFMRPL GGWIFGWIADTRGRKVSMIISVFMMCAGSLLIAVMPTYETIGVAAPVLLVVARLIQGLSVGAEYGTGATYISEIATPGRR CFYGSFQYFTIIAGQLLALMTVVILQQTLTGEELREWGWRIPFFIGAFSSIVVVYLRRAMHETATKKEMNRKDAGSLRGM FKHKRAVALVVAFTIGGSLYFYTFTTYMQKFLVISAGFSPETVSFIMTAALVGFMFCQPLFGLLADRIGIKVHMLLFSGL AMLLVIPLLYSLQSVSSPFTAFLLVFGGLAIASLYTPIAGIVKAELFPPAVRALGVGFPYAVGNAAFGGTAEYVALSLRS QGIEEYFFFYVAAVVTITFIAATLMPNLSRYGYISGSGEIEERTGLRGCIKSQAARI
Specific function: Uptake of alpha-ketoglutarate across the boundary membrane with the concomitant import of a cation (symport system) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1788942, Length=426, Percent_Identity=56.3380281690141, Blast_Score=451, Evalue=1e-128, Organism=Escherichia coli, GI1790550, Length=440, Percent_Identity=31.5909090909091, Blast_Score=209, Evalue=2e-55, Organism=Escherichia coli, GI1788292, Length=443, Percent_Identity=30.2483069977427, Blast_Score=173, Evalue=2e-44, Organism=Escherichia coli, GI1789941, Length=433, Percent_Identity=31.6397228637413, Blast_Score=172, Evalue=3e-44, Organism=Escherichia coli, GI87082404, Length=394, Percent_Identity=25.8883248730964, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI87082231, Length=472, Percent_Identity=24.364406779661, Blast_Score=83, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004736 - InterPro: IPR020846 - InterPro: IPR016196 - InterPro: IPR005828 - InterPro: IPR005829 [H]
Pfam domain/function: PF00083 Sugar_tr [H]
EC number: NA
Molecular weight: Translated: 49941; Mature: 49810
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASTSDSTRHTEKSDQMKSPNRVRAIMGACSGNLVEWYDFFIYAYTAIYFASSFFPKGD CCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC TTSQLLATAGVFAVGFFMRPLGGWIFGWIADTRGRKVSMIISVFMMCAGSLLIAVMPTYE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH TIGVAAPVLLVVARLIQGLSVGAEYGTGATYISEIATPGRRCFYGSFQYFTIIAGQLLAL HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHH MTVVILQQTLTGEELREWGWRIPFFIGAFSSIVVVYLRRAMHETATKKEMNRKDAGSLRG HHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH MFKHKRAVALVVAFTIGGSLYFYTFTTYMQKFLVISAGFSPETVSFIMTAALVGFMFCQP HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LFGLLADRIGIKVHMLLFSGLAMLLVIPLLYSLQSVSSPFTAFLLVFGGLAIASLYTPIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH GIVKAELFPPAVRALGVGFPYAVGNAAFGGTAEYVALSLRSQGIEEYFFFYVAAVVTITF HHHHHHCCCHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH IAATLMPNLSRYGYISGSGEIEERTGLRGCIKSQAARI HHHHHHCCHHHCEEECCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SASTSDSTRHTEKSDQMKSPNRVRAIMGACSGNLVEWYDFFIYAYTAIYFASSFFPKGD CCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC TTSQLLATAGVFAVGFFMRPLGGWIFGWIADTRGRKVSMIISVFMMCAGSLLIAVMPTYE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHH TIGVAAPVLLVVARLIQGLSVGAEYGTGATYISEIATPGRRCFYGSFQYFTIIAGQLLAL HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHH MTVVILQQTLTGEELREWGWRIPFFIGAFSSIVVVYLRRAMHETATKKEMNRKDAGSLRG HHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH MFKHKRAVALVVAFTIGGSLYFYTFTTYMQKFLVISAGFSPETVSFIMTAALVGFMFCQP HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LFGLLADRIGIKVHMLLFSGLAMLLVIPLLYSLQSVSSPFTAFLLVFGGLAIASLYTPIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH GIVKAELFPPAVRALGVGFPYAVGNAAFGGTAEYVALSLRSQGIEEYFFFYVAAVVTITF HHHHHHCCCHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH IAATLMPNLSRYGYISGSGEIEERTGLRGCIKSQAARI HHHHHHCCHHHCEEECCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 2-oxoglutarate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 2-oxoglutarate [Periplasm] = Proton [Cytoplasm] + 2-oxoglutarate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2118499; 9205837; 9278503; 1709493; 2190187; 2053984; 8419306 [H]