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The map label for this gene is 66045270

Identifier: 66045270

GI number: 66045270

Start: 2354414

End: 2355169

Strand: Reverse

Name: 66045270

Synonym: Psyr_2030

Alternate gene names: NA

Gene position: 2355169-2354414 (Counterclockwise)

Preceding gene: 66045271

Following gene: 66045261

Centisome position: 38.65

GC content: 58.73

Gene sequence:

>756_bases
ATGATCAGTGGAATAAGCAGCAGTTTCTCCAGCTACACCAGTTCGACCAGTGCAACCTCCAGCACCAGCAACAAGAAGTT
TCAGGAAGAGCTGTTGGCCAAGCTGGATACCGATGGCGACGGCAGCATTGCCAAGAACGAGCTGAGCTCGGCCCTGTCGT
CGAACAGCAAGGATGGTGTCACGGTGAGCCTGAGCAAGGCGTTCAGCGACCTGGACAGCAATGACGATGACAGCCTGGAT
GCCGACGAGCTGGCCGCCATGACACCACCTCCGCCGCCCATGCAGTCGGTCGACGAGCAGGCAGAAGACCTGCTCGGCGC
GCTGGACAGCGATGGCGACGGCGCAATCAGCAGCGACGAGCTGACCACGGGGCTGAGCAATACGGGCAGCACGGCAAACA
GCAACCAGGTGTTCGATGCACTGGACACTGACGAAGACGGCACAGTCAGCCTTGAAGAGCTGGTCGCCGGCATGCAGCCG
CAACAGCCTTCTGCCGGTATGTCGTCTGCGCAGGTGAGCACTTCCAGTGCCACTGAAAGCTCCAGCCTGTTCAGTACGCT
GGACAGCAATAGCGACGACAGTATCAGCGCTTCCGAGTTGTCTGCCGCATTGAAGCAGAGTGACAGCACCATTGATCAGG
GCAATACCGACCAGATCGCCACTCAGGCCTTGAACAAGATGATCGCCGCACTCAGCGAAAAATATGACACCCAGAGCAGC
AAGCCAGTCGGCAAGTACCTGGACACCGCTGCGTAA

Upstream 100 bases:

>100_bases
GCCACGTACAAAGCTTACATTCCCTCGACAACTGACGCCCCGAGGCTGCAAAAGCCGGTACACCGTTATCGGGCACATTC
ATCTCAGGGGAGTGAGACCA

Downstream 100 bases:

>100_bases
GGCGAGGCTCCGCCGCGCGTCAGGGCGCGGCGGAAACTTTCGCCGTCAGCGGCTGCGGGCACGCTCGCTGCCGACCCAGT
CGGTCAACAGGCTGTAAGCG

Product: calcium-binding EF-hand

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MISGISSSFSSYTSSTSATSSTSNKKFQEELLAKLDTDGDGSIAKNELSSALSSNSKDGVTVSLSKAFSDLDSNDDDSLD
ADELAAMTPPPPPMQSVDEQAEDLLGALDSDGDGAISSDELTTGLSNTGSTANSNQVFDALDTDEDGTVSLEELVAGMQP
QQPSAGMSSAQVSTSSATESSSLFSTLDSNSDDSISASELSAALKQSDSTIDQGNTDQIATQALNKMIAALSEKYDTQSS
KPVGKYLDTAA

Sequences:

>Translated_251_residues
MISGISSSFSSYTSSTSATSSTSNKKFQEELLAKLDTDGDGSIAKNELSSALSSNSKDGVTVSLSKAFSDLDSNDDDSLD
ADELAAMTPPPPPMQSVDEQAEDLLGALDSDGDGAISSDELTTGLSNTGSTANSNQVFDALDTDEDGTVSLEELVAGMQP
QQPSAGMSSAQVSTSSATESSSLFSTLDSNSDDSISASELSAALKQSDSTIDQGNTDQIATQALNKMIAALSEKYDTQSS
KPVGKYLDTAA
>Mature_251_residues
MISGISSSFSSYTSSTSATSSTSNKKFQEELLAKLDTDGDGSIAKNELSSALSSNSKDGVTVSLSKAFSDLDSNDDDSLD
ADELAAMTPPPPPMQSVDEQAEDLLGALDSDGDGAISSDELTTGLSNTGSTANSNQVFDALDTDEDGTVSLEELVAGMQP
QQPSAGMSSAQVSTSSATESSSLFSTLDSNSDDSISASELSAALKQSDSTIDQGNTDQIATQALNKMIAALSEKYDTQSS
KPVGKYLDTAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17567695, Length=128, Percent_Identity=30.46875, Blast_Score=68, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25752; Mature: 25752

Theoretical pI: Translated: 3.54; Mature: 3.54

Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISGISSSFSSYTSSTSATSSTSNKKFQEELLAKLDTDGDGSIAKNELSSALSSNSKDGV
CCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCE
TVSLSKAFSDLDSNDDDSLDADELAAMTPPPPPMQSVDEQAEDLLGALDSDGDGAISSDE
EEEHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHH
LTTGLSNTGSTANSNQVFDALDTDEDGTVSLEELVAGMQPQQPSAGMSSAQVSTSSATES
HHHCCCCCCCCCCCCCHHHCCCCCCCCCEEHHHHHCCCCCCCCCCCCCHHHCCCCCCHHH
SSLFSTLDSNSDDSISASELSAALKQSDSTIDQGNTDQIATQALNKMIAALSEKYDTQSS
HHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
KPVGKYLDTAA
CCHHHHHHCCC
>Mature Secondary Structure
MISGISSSFSSYTSSTSATSSTSNKKFQEELLAKLDTDGDGSIAKNELSSALSSNSKDGV
CCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCE
TVSLSKAFSDLDSNDDDSLDADELAAMTPPPPPMQSVDEQAEDLLGALDSDGDGAISSDE
EEEHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHH
LTTGLSNTGSTANSNQVFDALDTDEDGTVSLEELVAGMQPQQPSAGMSSAQVSTSSATES
HHHCCCCCCCCCCCCCHHHCCCCCCCCCEEHHHHHCCCCCCCCCCCCCHHHCCCCCCHHH
SSLFSTLDSNSDDSISASELSAALKQSDSTIDQGNTDQIATQALNKMIAALSEKYDTQSS
HHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
KPVGKYLDTAA
CCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA