| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045256
Identifier: 66045256
GI number: 66045256
Start: 2340017
End: 2340277
Strand: Reverse
Name: 66045256
Synonym: Psyr_2016
Alternate gene names: NA
Gene position: 2340277-2340017 (Counterclockwise)
Preceding gene: 66045259
Following gene: 66045254
Centisome position: 38.4
GC content: 54.02
Gene sequence:
>261_bases ATGCGTAAATCTTTAGCCTATGCCTTGATGCTTTCTGCCACCCTGGGCCTTGCCGCCTGTGACAAAAAGTCCGAAAACAC CCAGCAAGATGCCAACAAGGCAGCTCAGCAATCCCAGGAGTCGATGGAAAAGGCTCAGGAAAAAGTGAATGACGCGGCCA AGGAAAGCCAGGAAGCCGCTCAGAAGAACGCTGAAGCCGCTCAGCAGCGCACCAATGAAAACGCCAACAAGGCGCCAGAA GCAGCACCAGCCACCAAGTAA
Upstream 100 bases:
>100_bases ACCGTGAAACAACGCCCTCCATTATTGTCGTCACCGGTGGAACTTAACCCTCAGGGGCAGGCTCTTAGGCTCGTGAATAA TCAATAAGGAGAAACACCCC
Downstream 100 bases:
>100_bases GGCTGAGACGCTCGCAGAACTAAAGAGGCCCGCTTATAGCGGGCCTCTTCATGCAACACGTTTTTTCCTGCGCAATCGTC TAAAGCACGGCCTTCAAGCC
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MRKSLAYALMLSATLGLAACDKKSENTQQDANKAAQQSQESMEKAQEKVNDAAKESQEAAQKNAEAAQQRTNENANKAPE AAPATK
Sequences:
>Translated_86_residues MRKSLAYALMLSATLGLAACDKKSENTQQDANKAAQQSQESMEKAQEKVNDAAKESQEAAQKNAEAAQQRTNENANKAPE AAPATK >Mature_86_residues MRKSLAYALMLSATLGLAACDKKSENTQQDANKAAQQSQESMEKAQEKVNDAAKESQEAAQKNAEAAQQRTNENANKAPE AAPATK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9195; Mature: 9195
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKSLAYALMLSATLGLAACDKKSENTQQDANKAAQQSQESMEKAQEKVNDAAKESQEAA CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKNAEAAQQRTNENANKAPEAAPATK HHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MRKSLAYALMLSATLGLAACDKKSENTQQDANKAAQQSQESMEKAQEKVNDAAKESQEAA CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKNAEAAQQRTNENANKAPEAAPATK HHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA