| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is gltX [H]
Identifier: 66045217
GI number: 66045217
Start: 2294713
End: 2296194
Strand: Direct
Name: gltX [H]
Synonym: Psyr_1977
Alternate gene names: 66045217
Gene position: 2294713-2296194 (Clockwise)
Preceding gene: 66045214
Following gene: 66045218
Centisome position: 37.66
GC content: 60.8
Gene sequence:
>1482_bases ATGACCACCGTTCGTACCCGCATCGCGCCATCGCCCACAGGCGACCCCCACGTCGGCACGGCCTACATCGCGCTGTTCAA CTACTGCTTTGCCAAACAGCACGGCGGCGAGTTCATCCTGCGCATTGAAGACACCGATCAACTGCGCTCTACCCGCGAGT CCGAACAGCAGATCTTCGACGCACTGCGCTGGCTGGGCATCGACTGGAGCGAAGGCCCCGACGTCGGTGGTCCTCACGGT CCCTACCGCCAGAGCGAGCGCGGCGACATCTACCAGAAATACGCGCAGCAACTGGTCGACATGGGCCATGCCTTCCCGTG CTTCTGCACCGCCGAAGAACTCGACCAGATGCGCGCCGAACAGCAGGCCAAGGGCGAAACCCCGCGCTATGACGGTCGTG CCTTGCTGCTCTCCAAGGAAGAGGTTCAGCGCCGCCTGGATGCCGGCGAGCCACACGTGATCCGCATGAAAGTGCCGACC GAAGGTGTCTGCGTAGTACCTGACATGCTGCGTGGCGAAGTCGAAATCCCGTGGGACCGCATGGACATGCAGGTCCTGAT GAAGACCGACGGCCTGCCGACCTACTTCCTCGCCAACGTGGTCGATGACCACCTGATGGGCATCACCCATGTACTGCGCG GCGAAGAATGGCTGCCTTCGGCGCCGAAACTGATCCTGCTGTACGAATACTTCGGCTGGGACAAGCCGCAGCTGTGCTAC ATGCCGCTGCTGCGTAACCCCGACAAGAGCAAGCTGTCCAAGCGCAAGAACCCCACCTCGGTGACCTTCTACGAGCGCAT GGGCTTCATGCCCGAGGCGATGCTCAACTACCTGGGGCGCATGGGCTGGTCGATGCCTGACGAGCGCGAGAAGTTCTCCC TGCAGGAGATGGTCGACAACTTCGACCTGTCGCGTGTTTCGTTGGGCGGGCCGATCTTCGATATCGAGAAGCTTTCCTGG CTCAATGGCCAATGGCTGCGTGATCTGCCGGTCGAGGAGTTCGCCTCGCGTCTGAAGACCTGGGCGCTGAATCCTGACTA CATGATGAAGATTGCACCGCATGTGCAGGGCAGGGTAGAGACCTTCAGTCAGGTCGCACCGCTGGCCGGCTTCTTCTTCG CAGGTGGCGTCACGCCTGATGTGAAGCTGTTCGAGCACAAGAAGCTGTCCCCGGAGCAGGTGCGTCAGGTGATGCAACTG ATCCTGTGGAAGCTGGAATCGCTGCGTCAGTGGGAGAAGGAGCGGATCATGGGCTGCATCCAGGCCGTGGTCGAGCATCT TGAACTCAAGCTGCGTGATGCCATGCCACTGATGTTCGCTGCGATCACCGGCCAGGCCAATTCGGTGTCGGTGACCGATG CGATGGAAATCCTCGGTCCGGACCTGACCCGCTTCCGGCTGCGTCAGGCCCTCGATTTGCTCGGTGGCGTTTCCAAGAAA GAAAACAAGGAATGGGAAAAGCTTCTGGGCTCTATCGCCTGA
Upstream 100 bases:
>100_bases TGAGCGCGGAGCGCGAACGCAATCACATTGCCCGTGCTGGAGCCCCATGCCCCCGGCCTGTTAACATTCCGCGCTTGATC GACCTCATTCGGGATTTTCC
Downstream 100 bases:
>100_bases GGCGTTACCTGTTCCTGTGAGTCGCCCCCGGTTTTCCGGGGGTTGAATGGTAAGTGGTTGTATTACCGACAAAAAAGTTT GCAGATTGTAGAAAATAAAT
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS [H]
Number of amino acids: Translated: 493; Mature: 492
Protein sequence:
>493_residues MTTVRTRIAPSPTGDPHVGTAYIALFNYCFAKQHGGEFILRIEDTDQLRSTRESEQQIFDALRWLGIDWSEGPDVGGPHG PYRQSERGDIYQKYAQQLVDMGHAFPCFCTAEELDQMRAEQQAKGETPRYDGRALLLSKEEVQRRLDAGEPHVIRMKVPT EGVCVVPDMLRGEVEIPWDRMDMQVLMKTDGLPTYFLANVVDDHLMGITHVLRGEEWLPSAPKLILLYEYFGWDKPQLCY MPLLRNPDKSKLSKRKNPTSVTFYERMGFMPEAMLNYLGRMGWSMPDEREKFSLQEMVDNFDLSRVSLGGPIFDIEKLSW LNGQWLRDLPVEEFASRLKTWALNPDYMMKIAPHVQGRVETFSQVAPLAGFFFAGGVTPDVKLFEHKKLSPEQVRQVMQL ILWKLESLRQWEKERIMGCIQAVVEHLELKLRDAMPLMFAAITGQANSVSVTDAMEILGPDLTRFRLRQALDLLGGVSKK ENKEWEKLLGSIA
Sequences:
>Translated_493_residues MTTVRTRIAPSPTGDPHVGTAYIALFNYCFAKQHGGEFILRIEDTDQLRSTRESEQQIFDALRWLGIDWSEGPDVGGPHG PYRQSERGDIYQKYAQQLVDMGHAFPCFCTAEELDQMRAEQQAKGETPRYDGRALLLSKEEVQRRLDAGEPHVIRMKVPT EGVCVVPDMLRGEVEIPWDRMDMQVLMKTDGLPTYFLANVVDDHLMGITHVLRGEEWLPSAPKLILLYEYFGWDKPQLCY MPLLRNPDKSKLSKRKNPTSVTFYERMGFMPEAMLNYLGRMGWSMPDEREKFSLQEMVDNFDLSRVSLGGPIFDIEKLSW LNGQWLRDLPVEEFASRLKTWALNPDYMMKIAPHVQGRVETFSQVAPLAGFFFAGGVTPDVKLFEHKKLSPEQVRQVMQL ILWKLESLRQWEKERIMGCIQAVVEHLELKLRDAMPLMFAAITGQANSVSVTDAMEILGPDLTRFRLRQALDLLGGVSKK ENKEWEKLLGSIA >Mature_492_residues TTVRTRIAPSPTGDPHVGTAYIALFNYCFAKQHGGEFILRIEDTDQLRSTRESEQQIFDALRWLGIDWSEGPDVGGPHGP YRQSERGDIYQKYAQQLVDMGHAFPCFCTAEELDQMRAEQQAKGETPRYDGRALLLSKEEVQRRLDAGEPHVIRMKVPTE GVCVVPDMLRGEVEIPWDRMDMQVLMKTDGLPTYFLANVVDDHLMGITHVLRGEEWLPSAPKLILLYEYFGWDKPQLCYM PLLRNPDKSKLSKRKNPTSVTFYERMGFMPEAMLNYLGRMGWSMPDEREKFSLQEMVDNFDLSRVSLGGPIFDIEKLSWL NGQWLRDLPVEEFASRLKTWALNPDYMMKIAPHVQGRVETFSQVAPLAGFFFAGGVTPDVKLFEHKKLSPEQVRQVMQLI LWKLESLRQWEKERIMGCIQAVVEHLELKLRDAMPLMFAAITGQANSVSVTDAMEILGPDLTRFRLRQALDLLGGVSKKE NKEWEKLLGSIA
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=498, Percent_Identity=34.7389558232932, Blast_Score=276, Evalue=5e-74, Organism=Escherichia coli, GI1788743, Length=490, Percent_Identity=35.9183673469388, Blast_Score=297, Evalue=1e-81, Organism=Escherichia coli, GI226510925, Length=306, Percent_Identity=30.718954248366, Blast_Score=108, Evalue=5e-25, Organism=Caenorhabditis elegans, GI71993394, Length=486, Percent_Identity=32.7160493827161, Blast_Score=261, Evalue=7e-70, Organism=Saccharomyces cerevisiae, GI6324540, Length=501, Percent_Identity=33.7325349301397, Blast_Score=259, Evalue=6e-70, Organism=Saccharomyces cerevisiae, GI6324742, Length=312, Percent_Identity=24.6794871794872, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI24665321, Length=491, Percent_Identity=34.4195519348269, Blast_Score=267, Evalue=1e-71,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 56507; Mature: 56376
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVRTRIAPSPTGDPHVGTAYIALFNYCFAKQHGGEFILRIEDTDQLRSTRESEQQIFD CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHH ALRWLGIDWSEGPDVGGPHGPYRQSERGDIYQKYAQQLVDMGHAFPCFCTAEELDQMRAE HHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHH QQAKGETPRYDGRALLLSKEEVQRRLDAGEPHVIRMKVPTEGVCVVPDMLRGEVEIPWDR HHHCCCCCCCCCCEEEECHHHHHHHHCCCCCEEEEEECCCCCEEECCHHHCCCEECCHHH MDMQVLMKTDGLPTYFLANVVDDHLMGITHVLRGEEWLPSAPKLILLYEYFGWDKPQLCY HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHCCCCCCEEE MPLLRNPDKSKLSKRKNPTSVTFYERMGFMPEAMLNYLGRMGWSMPDEREKFSLQEMVDN HHHHCCCCHHHHHHCCCCCEEEHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC FDLSRVSLGGPIFDIEKLSWLNGQWLRDLPVEEFASRLKTWALNPDYMMKIAPHVQGRVE CCCCEEECCCCEEEHHHHHHCCCCHHHCCCHHHHHHHHHHHCCCCHHHHEECHHHHHHHH TFSQVAPLAGFFFAGGVTPDVKLFEHKKLSPEQVRQVMQLILWKLESLRQWEKERIMGCI HHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAVVEHLELKLRDAMPLMFAAITGQANSVSVTDAMEILGPDLTRFRLRQALDLLGGVSKK HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC ENKEWEKLLGSIA CCHHHHHHHHCCC >Mature Secondary Structure TTVRTRIAPSPTGDPHVGTAYIALFNYCFAKQHGGEFILRIEDTDQLRSTRESEQQIFD CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHH ALRWLGIDWSEGPDVGGPHGPYRQSERGDIYQKYAQQLVDMGHAFPCFCTAEELDQMRAE HHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEECHHHHHHHHHH QQAKGETPRYDGRALLLSKEEVQRRLDAGEPHVIRMKVPTEGVCVVPDMLRGEVEIPWDR HHHCCCCCCCCCCEEEECHHHHHHHHCCCCCEEEEEECCCCCEEECCHHHCCCEECCHHH MDMQVLMKTDGLPTYFLANVVDDHLMGITHVLRGEEWLPSAPKLILLYEYFGWDKPQLCY HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHCCCCCCEEE MPLLRNPDKSKLSKRKNPTSVTFYERMGFMPEAMLNYLGRMGWSMPDEREKFSLQEMVDN HHHHCCCCHHHHHHCCCCCEEEHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC FDLSRVSLGGPIFDIEKLSWLNGQWLRDLPVEEFASRLKTWALNPDYMMKIAPHVQGRVE CCCCEEECCCCEEEHHHHHHCCCCHHHCCCHHHHHHHHHHHCCCCHHHHEECHHHHHHHH TFSQVAPLAGFFFAGGVTPDVKLFEHKKLSPEQVRQVMQLILWKLESLRQWEKERIMGCI HHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAVVEHLELKLRDAMPLMFAAITGQANSVSVTDAMEILGPDLTRFRLRQALDLLGGVSKK HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC ENKEWEKLLGSIA CCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA