| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045192
Identifier: 66045192
GI number: 66045192
Start: 2236935
End: 2237501
Strand: Reverse
Name: 66045192
Synonym: Psyr_1952
Alternate gene names: NA
Gene position: 2237501-2236935 (Counterclockwise)
Preceding gene: 66045193
Following gene: 66045191
Centisome position: 36.72
GC content: 63.49
Gene sequence:
>567_bases ATGAGCGCACCGACCCGACATATCGTCCGTCCGGCAGGCGCCGGGCATGAAACCCTGTACGTCCTGTTGCTGTGCCTGCT GATCCTCGGCAGCGCTGCCGGCGTGATCAGCCTGCACCGTGATACTCAGGAAACGCACAGCGTCTCCAGCCATCAACTGG ACGCACGACGCGACCTGAGCGCTGCGGAACAAGGCATTTACGCCGACCTGCGCGTGACCCTCGATGAAATCCGCCTGCTG GCCACCGAGCAGCAGACACCGATCACCCCAGAGCAACTGGGCGATGAAGGCTTTGCGCCGTTCGCCAAAGATGCCAGTTC GGTGAGCCGTGGCGATCATGCCTGGCAGATGATCGAGCAGTCCTATCTGGGGCTGAGCCGGACGCCGAGCGTGGCCGGTT CGTTTCTGATGCGTGTCGATTCCGGCGAGCAGCCGGACATCTGGATCAACAGCAACGCCTCGCCGGCGGCGGTCAGCGAC CTCGGTGACCAGGCCCTGATCGATTCAGGCTGGAAACAGGTCGTCGCGCAATTCGATGCTGGCGTGACCCGTCAGCACCC GCACTGA
Upstream 100 bases:
>100_bases CGACCGTGACCTTCAAGCGCCCGGCTTCGGAGTTCTACGTGCTGTTCGACGCCGGACCCGGTCACGTGGTGGAAATCGAT CAGGCGGATATCCAGGCCCC
Downstream 100 bases:
>100_bases AACTCCGCATTCCTTTGAAAGAAGACCGCTTGCCCATGCCTATTTCACTCAAACGCCGTCCCTTGCTGCGCGTCCTGCTG ACGGGGCTGATGGTCGCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MSAPTRHIVRPAGAGHETLYVLLLCLLILGSAAGVISLHRDTQETHSVSSHQLDARRDLSAAEQGIYADLRVTLDEIRLL ATEQQTPITPEQLGDEGFAPFAKDASSVSRGDHAWQMIEQSYLGLSRTPSVAGSFLMRVDSGEQPDIWINSNASPAAVSD LGDQALIDSGWKQVVAQFDAGVTRQHPH
Sequences:
>Translated_188_residues MSAPTRHIVRPAGAGHETLYVLLLCLLILGSAAGVISLHRDTQETHSVSSHQLDARRDLSAAEQGIYADLRVTLDEIRLL ATEQQTPITPEQLGDEGFAPFAKDASSVSRGDHAWQMIEQSYLGLSRTPSVAGSFLMRVDSGEQPDIWINSNASPAAVSD LGDQALIDSGWKQVVAQFDAGVTRQHPH >Mature_187_residues SAPTRHIVRPAGAGHETLYVLLLCLLILGSAAGVISLHRDTQETHSVSSHQLDARRDLSAAEQGIYADLRVTLDEIRLLA TEQQTPITPEQLGDEGFAPFAKDASSVSRGDHAWQMIEQSYLGLSRTPSVAGSFLMRVDSGEQPDIWINSNASPAAVSDL GDQALIDSGWKQVVAQFDAGVTRQHPH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20306; Mature: 20175
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPTRHIVRPAGAGHETLYVLLLCLLILGSAAGVISLHRDTQETHSVSSHQLDARRDLS CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHH AAEQGIYADLRVTLDEIRLLATEQQTPITPEQLGDEGFAPFAKDASSVSRGDHAWQMIEQ HHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHH SYLGLSRTPSVAGSFLMRVDSGEQPDIWINSNASPAAVSDLGDQALIDSGWKQVVAQFDA HHCCCCCCHHHHHHHHHEECCCCCCCEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHHC GVTRQHPH CCCCCCCC >Mature Secondary Structure SAPTRHIVRPAGAGHETLYVLLLCLLILGSAAGVISLHRDTQETHSVSSHQLDARRDLS CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHH AAEQGIYADLRVTLDEIRLLATEQQTPITPEQLGDEGFAPFAKDASSVSRGDHAWQMIEQ HHHHCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHH SYLGLSRTPSVAGSFLMRVDSGEQPDIWINSNASPAAVSDLGDQALIDSGWKQVVAQFDA HHCCCCCCHHHHHHHHHEECCCCCCCEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHHC GVTRQHPH CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA