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The map label for this gene is fecI [C]

Identifier: 66045183

GI number: 66045183

Start: 2216064

End: 2216600

Strand: Reverse

Name: fecI [C]

Synonym: Psyr_1943

Alternate gene names: 66045183

Gene position: 2216600-2216064 (Counterclockwise)

Preceding gene: 66045188

Following gene: 66045181

Centisome position: 36.38

GC content: 58.1

Gene sequence:

>537_bases
ATGACGGAACACGTAATCACAAGTAAGTGCGACTCACCCTTACTCCAGGCATTCGTCGATAACTACTTGCTGCTGGTCAA
GATCGCGGCCCGCATCGTGGGTTGCCGCTCGCGCGCCGAAGACGTCGTGCAGGATGCCTTTTTCAGACTGCGCTCGGCAC
CGCAGGCCACGTTGACCTTCAAGGCACAGCTCAGTTACCTGTTTCAGATCGTGCGCAACCTGGCCATCGATCATTACCGC
AAACAGGCGCTGGAACAGAAATACACCGGCCCGGAGGCCGAGGGTCTGAATGTGGTGATTCAGGGTGCATCGCCGGAAAT
CTCGCATATCAATTTCTCCAGCCTGGAGAAAATTGCCGACGCCCTGACCGAGCTGCCGCCCCGCACCCGTTATGCGTTCG
AGATGTACCGCCTGCACGGTGTGCCGCAAAAGGACATCGCCAAGGAACTGGGTGTGTCGCCAACGCTGGTCAACTTCATG
ATCCGCGATGCGCTGATTCATTGCCGCAAGGTCAATGGCGCCCAGGCCGAAGCCTGA

Upstream 100 bases:

>100_bases
GACAATAATTATCATTAAGGCTAATTTGTCGCCCCATGTGATGGCGCTGCTCCTTCCATGCGGCCCTCCCCTCCATTGTT
AAAGCAGCAAGGTGAATTCC

Downstream 100 bases:

>100_bases
TTGCGGGCGGTTCAGACAGGCAAAAAAAATCCGGAGCACTGGCTCCGGATTTTTGTTTTCAGCCTGGCAGGCGACAGATC
AGCGGCTGACCTGATACTCG

Product: extracytoplasmic-function sigma-70 factor

Products: NA

Alternate protein names: Extracytoplasmic-Function Sigma-70 Factor; RNA Polymerase Sigma Factor; ECF Subfamily RNA Polymerase Sigma Factor; Sigma-; RNA Polymerase Sigma Factor Sigma-70 Family; Extracytoplasmic-Function Sigma-70 Factor PvdS; Sigma Factor; ECF Subfamily RNA Polymerase Sigma-70 Factor; Fec I Like Protein; RNA Polymerase Sigma-24 Subunit ECF Subfamily; RNA Polymerase Sigma Factor FecI; RNA Polymerase Sigma-70 Family Protein; RNA Polymerase Sigma Factor Protein; ECF Family Sigma Factor; RNA Polymerase ECF-Subfamily Sigma Factor; RNA Polymerase Sigma Factor FECI Protein; Ferric Regulator Sigma-24 Subunit; DNA-Directed RNA Polymerase Sigma-E/Sigma-24/FecI; FecI Like Protein; PpiC-Type Peptidyl-Prolyl Cis-Trans Isomerase; ECF Family RNA Polymerase Sigma Factor; Sigma-70 Family RNA Polymerase Sigma Factor; RNA Polymerase ECF-Subfamily Sigma-70 Factor; ECF Sigma Factor FecI Family; RNA Polymerase Sigma Factor FecI Family

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MTEHVITSKCDSPLLQAFVDNYLLLVKIAARIVGCRSRAEDVVQDAFFRLRSAPQATLTFKAQLSYLFQIVRNLAIDHYR
KQALEQKYTGPEAEGLNVVIQGASPEISHINFSSLEKIADALTELPPRTRYAFEMYRLHGVPQKDIAKELGVSPTLVNFM
IRDALIHCRKVNGAQAEA

Sequences:

>Translated_178_residues
MTEHVITSKCDSPLLQAFVDNYLLLVKIAARIVGCRSRAEDVVQDAFFRLRSAPQATLTFKAQLSYLFQIVRNLAIDHYR
KQALEQKYTGPEAEGLNVVIQGASPEISHINFSSLEKIADALTELPPRTRYAFEMYRLHGVPQKDIAKELGVSPTLVNFM
IRDALIHCRKVNGAQAEA
>Mature_177_residues
TEHVITSKCDSPLLQAFVDNYLLLVKIAARIVGCRSRAEDVVQDAFFRLRSAPQATLTFKAQLSYLFQIVRNLAIDHYRK
QALEQKYTGPEAEGLNVVIQGASPEISHINFSSLEKIADALTELPPRTRYAFEMYRLHGVPQKDIAKELGVSPTLVNFMI
RDALIHCRKVNGAQAEA

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19972; Mature: 19841

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEHVITSKCDSPLLQAFVDNYLLLVKIAARIVGCRSRAEDVVQDAFFRLRSAPQATLTF
CCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
KAQLSYLFQIVRNLAIDHYRKQALEQKYTGPEAEGLNVVIQGASPEISHINFSSLEKIAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH
ALTELPPRTRYAFEMYRLHGVPQKDIAKELGVSPTLVNFMIRDALIHCRKVNGAQAEA
HHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TEHVITSKCDSPLLQAFVDNYLLLVKIAARIVGCRSRAEDVVQDAFFRLRSAPQATLTF
CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
KAQLSYLFQIVRNLAIDHYRKQALEQKYTGPEAEGLNVVIQGASPEISHINFSSLEKIAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH
ALTELPPRTRYAFEMYRLHGVPQKDIAKELGVSPTLVNFMIRDALIHCRKVNGAQAEA
HHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA