| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045125
Identifier: 66045125
GI number: 66045125
Start: 2153201
End: 2153731
Strand: Reverse
Name: 66045125
Synonym: Psyr_1881
Alternate gene names: NA
Gene position: 2153731-2153201 (Counterclockwise)
Preceding gene: 66045126
Following gene: 66045124
Centisome position: 35.34
GC content: 57.25
Gene sequence:
>531_bases ATGAAAAACACCCTGAAAAAACTGCTTCTCGCTGTTGCGTGTCTGGCGACGGCTCCCGCGTTCGCTGCGTGTCAGATGAC GCCGGTGGAGTACGACATGCCTTCGCAACGTCTGGACGAGGCCTTGCAGCAGTTGGCCCATCGATCCGGCTGCCCGGTGA CGGTCGACCTGGGCGCGGACAGCAGCAGAAAGGTCAAGAAATTCAAGGGTACGTTCACCCCGGATCAGGCGTTGTGGCTG GTTTTGAAGAAAACCGGGCTGGAAGGCTATGTCGAAAATGACGGGCTCACGGTTGACCGTCGCGGCCAGGATTTTGTAAA CCAGCGGGCAACAGAGCTACGCACGGCTATCGATGCGGCAGGTACACGGATGGAGGCCAAAAAGAAGAAGCGCTTCCTTC ATCAACTGGACACTATCGAGTCCGGAGCGAAGAAAGTGGTCCTTGAACAGAGCTTTGTCAGCGCAGCCGAGATGGCGAGT TACAAGCGCGACTTCGACGAACTGTCGAGCCAGATACCGGCCAGCAAGTGA
Upstream 100 bases:
>100_bases ACATAAGGGACACGACTGCTCAAGCAAGCGTCGGGCAGACAGGGAACATCATGCAGAAAACGATTTCCAAGCCCTACCTC CCGGATGAAACCCGTCAATC
Downstream 100 bases:
>100_bases TCCGCCGATAATTGCGCTAAAATCTGCCACTTTTAAGCGCAAGGCAGAACGCGCTGTGGATTATCGATGAAAAAAACCAC GTTACTCCTATTGGCACTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MKNTLKKLLLAVACLATAPAFAACQMTPVEYDMPSQRLDEALQQLAHRSGCPVTVDLGADSSRKVKKFKGTFTPDQALWL VLKKTGLEGYVENDGLTVDRRGQDFVNQRATELRTAIDAAGTRMEAKKKKRFLHQLDTIESGAKKVVLEQSFVSAAEMAS YKRDFDELSSQIPASK
Sequences:
>Translated_176_residues MKNTLKKLLLAVACLATAPAFAACQMTPVEYDMPSQRLDEALQQLAHRSGCPVTVDLGADSSRKVKKFKGTFTPDQALWL VLKKTGLEGYVENDGLTVDRRGQDFVNQRATELRTAIDAAGTRMEAKKKKRFLHQLDTIESGAKKVVLEQSFVSAAEMAS YKRDFDELSSQIPASK >Mature_176_residues MKNTLKKLLLAVACLATAPAFAACQMTPVEYDMPSQRLDEALQQLAHRSGCPVTVDLGADSSRKVKKFKGTFTPDQALWL VLKKTGLEGYVENDGLTVDRRGQDFVNQRATELRTAIDAAGTRMEAKKKKRFLHQLDTIESGAKKVVLEQSFVSAAEMAS YKRDFDELSSQIPASK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19440; Mature: 19440
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNTLKKLLLAVACLATAPAFAACQMTPVEYDMPSQRLDEALQQLAHRSGCPVTVDLGAD CHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCC SSRKVKKFKGTFTPDQALWLVLKKTGLEGYVENDGLTVDRRGQDFVNQRATELRTAIDAA CCHHHHHHCCCCCCHHHHHHHHHHCCCCCEECCCCEEECCCCHHHHHHHHHHHHHHHHHH GTRMEAKKKKRFLHQLDTIESGAKKVVLEQSFVSAAEMASYKRDFDELSSQIPASK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKNTLKKLLLAVACLATAPAFAACQMTPVEYDMPSQRLDEALQQLAHRSGCPVTVDLGAD CHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCC SSRKVKKFKGTFTPDQALWLVLKKTGLEGYVENDGLTVDRRGQDFVNQRATELRTAIDAA CCHHHHHHCCCCCCHHHHHHHHHHCCCCCEECCCCEEECCCCHHHHHHHHHHHHHHHHHH GTRMEAKKKKRFLHQLDTIESGAKKVVLEQSFVSAAEMASYKRDFDELSSQIPASK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA