| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66045087
Identifier: 66045087
GI number: 66045087
Start: 2123117
End: 2123503
Strand: Direct
Name: 66045087
Synonym: Psyr_1843
Alternate gene names: NA
Gene position: 2123117-2123503 (Clockwise)
Preceding gene: 66045086
Following gene: 66045094
Centisome position: 34.84
GC content: 61.5
Gene sequence:
>387_bases ATGCGCGTTCCAATCGTACTGCTGGGTGCTTTCATTGCGCTGGGTATCGGCTGCTCGGCCCAGGCCGAGGACTGCGACGC CAATCAGGCCAGCATGAACCGCTGCGCTGCCAATGAGCAGGCAGCGCTCGATGCCGATCTCAACAAGCAGTACAACGCGC AGATGGCGTGGTTGAAGACCCCGGCGAAAAAGCAGGCACTCAAGGATGCGCAACGAAAGTGGATAGCCCTGCGTGACGCC GATTGCCTGTATCAGACGGGCAAGCCCGAGGATTCAGGCTCTATCTGGCCCTTGCTGCAGTCGCAATGCCTGGCCGAGCA GACCCGCGTACGACTGAAGCAGCTGCAAGCCTATGTGGCCTGTCGCGCGGAAGGTTGCCCGCGCTGA
Upstream 100 bases:
>100_bases CTACACCGGGATCCGCCGTTGGCTGGATCGGGTCAAGGCACAGCCGGGTTATATCGGTATGCTGGACTGACACATCCGTC ATTTGAACAAAGGGAAATGT
Downstream 100 bases:
>100_bases GAGGCGCCGGGCAAACGGCGGTCAGATCGCGCCGAAGCGCTGGTTCAGGTAGTCGATGATCACCTTGGATTCATACATCC ATACGGTTTTGTCACCTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MRVPIVLLGAFIALGIGCSAQAEDCDANQASMNRCAANEQAALDADLNKQYNAQMAWLKTPAKKQALKDAQRKWIALRDA DCLYQTGKPEDSGSIWPLLQSQCLAEQTRVRLKQLQAYVACRAEGCPR
Sequences:
>Translated_128_residues MRVPIVLLGAFIALGIGCSAQAEDCDANQASMNRCAANEQAALDADLNKQYNAQMAWLKTPAKKQALKDAQRKWIALRDA DCLYQTGKPEDSGSIWPLLQSQCLAEQTRVRLKQLQAYVACRAEGCPR >Mature_128_residues MRVPIVLLGAFIALGIGCSAQAEDCDANQASMNRCAANEQAALDADLNKQYNAQMAWLKTPAKKQALKDAQRKWIALRDA DCLYQTGKPEDSGSIWPLLQSQCLAEQTRVRLKQLQAYVACRAEGCPR
Specific function: Unknown
COG id: COG3755
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14083; Mature: 14083
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 5.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVPIVLLGAFIALGIGCSAQAEDCDANQASMNRCAANEQAALDADLNKQYNAQMAWLKT CCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHCC PAKKQALKDAQRKWIALRDADCLYQTGKPEDSGSIWPLLQSQCLAEQTRVRLKQLQAYVA CHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH CRAEGCPR HHCCCCCC >Mature Secondary Structure MRVPIVLLGAFIALGIGCSAQAEDCDANQASMNRCAANEQAALDADLNKQYNAQMAWLKT CCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHCC PAKKQALKDAQRKWIALRDADCLYQTGKPEDSGSIWPLLQSQCLAEQTRVRLKQLQAYVA CHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH CRAEGCPR HHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA