| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is gstA [H]
Identifier: 66045086
GI number: 66045086
Start: 2122484
End: 2123086
Strand: Direct
Name: gstA [H]
Synonym: Psyr_1842
Alternate gene names: 66045086
Gene position: 2122484-2123086 (Clockwise)
Preceding gene: 66045085
Following gene: 66045087
Centisome position: 34.83
GC content: 58.21
Gene sequence:
>603_bases ATGTACAAGGTTTATGGCGATTACAACTCGGGCAACTGCTACAAGGTCAAGCTGATGCTTAACCTGCTGGGCAGCGAGTA CGAGTGGGTGCCGGTGGATATTCTCAACGGCGAAACCCAGACCCCGGCGTTTCTGGAAAAGAACCCCAACGGCAAGATTC CGGTGCTGGAGCTGGAAGATGGCACTTGCCTGTGGGAGTCCAATGCGATTCTCAACTTTCTGGCTGACGGCTCTTCGTAC CTGCCGAGCGAACCCAGGCTGCGTACCCAGGTGCTGCAGTGGCAGTTCTTCGAACAATACAGCCATGAGCCGTCGGTTGC GGTGGCCCGTTTCATCCAGTTCTATCTGGGCTTGCCGGCCGAACGCATGACCGAGTATCGCGCCATGCAGAAGGCCGGCT ATCGCGCACTGGCGGTGATGGAGCAGCAGCTCGACCGTACGCCGTTTCTGGTCGGCGAGAATTTTTCCATCGCCGACATT GCCTTGTATGCCTACACCCACGTCGCGCATCAGGGCGGTTTCGATCTGGCACCCTACACCGGGATCCGCCGTTGGCTGGA TCGGGTCAAGGCACAGCCGGGTTATATCGGTATGCTGGACTGA
Upstream 100 bases:
>100_bases TGAGGGTATAAAACGACTGGCGTCGGTGGTCCGCGCAGCACACCTTCTGCAAGCCGCCTGATTCAAGACGTCAACATAGA CGCAGCAAGGGAGCAGTCTG
Downstream 100 bases:
>100_bases CACATCCGTCATTTGAACAAAGGGAAATGTATGCGCGTTCCAATCGTACTGCTGGGTGCTTTCATTGCGCTGGGTATCGG CTGCTCGGCCCAGGCCGAGG
Product: glutathione S-transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MYKVYGDYNSGNCYKVKLMLNLLGSEYEWVPVDILNGETQTPAFLEKNPNGKIPVLELEDGTCLWESNAILNFLADGSSY LPSEPRLRTQVLQWQFFEQYSHEPSVAVARFIQFYLGLPAERMTEYRAMQKAGYRALAVMEQQLDRTPFLVGENFSIADI ALYAYTHVAHQGGFDLAPYTGIRRWLDRVKAQPGYIGMLD
Sequences:
>Translated_200_residues MYKVYGDYNSGNCYKVKLMLNLLGSEYEWVPVDILNGETQTPAFLEKNPNGKIPVLELEDGTCLWESNAILNFLADGSSY LPSEPRLRTQVLQWQFFEQYSHEPSVAVARFIQFYLGLPAERMTEYRAMQKAGYRALAVMEQQLDRTPFLVGENFSIADI ALYAYTHVAHQGGFDLAPYTGIRRWLDRVKAQPGYIGMLD >Mature_200_residues MYKVYGDYNSGNCYKVKLMLNLLGSEYEWVPVDILNGETQTPAFLEKNPNGKIPVLELEDGTCLWESNAILNFLADGSSY LPSEPRLRTQVLQWQFFEQYSHEPSVAVARFIQFYLGLPAERMTEYRAMQKAGYRALAVMEQQLDRTPFLVGENFSIADI ALYAYTHVAHQGGFDLAPYTGIRRWLDRVKAQPGYIGMLD
Specific function: Unknown
COG id: COG0625
COG function: function code O; Glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI4503481, Length=191, Percent_Identity=29.3193717277487, Blast_Score=65, Evalue=3e-11, Organism=Escherichia coli, GI1788640, Length=190, Percent_Identity=31.0526315789474, Blast_Score=85, Evalue=4e-18, Organism=Escherichia coli, GI87082195, Length=201, Percent_Identity=29.8507462686567, Blast_Score=70, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6324100, Length=238, Percent_Identity=25.6302521008403, Blast_Score=68, Evalue=8e-13, Organism=Drosophila melanogaster, GI17864598, Length=192, Percent_Identity=31.7708333333333, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI221378983, Length=185, Percent_Identity=28.1081081081081, Blast_Score=78, Evalue=4e-15, Organism=Drosophila melanogaster, GI24646259, Length=185, Percent_Identity=28.1081081081081, Blast_Score=78, Evalue=5e-15, Organism=Drosophila melanogaster, GI24654965, Length=203, Percent_Identity=29.064039408867, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI19922526, Length=200, Percent_Identity=28, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI19922528, Length=188, Percent_Identity=28.7234042553192, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI17864592, Length=190, Percent_Identity=26.3157894736842, Blast_Score=73, Evalue=9e-14, Organism=Drosophila melanogaster, GI24654992, Length=198, Percent_Identity=31.3131313131313, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24654996, Length=196, Percent_Identity=30.1020408163265, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI28571670, Length=178, Percent_Identity=26.9662921348315, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI19922532, Length=203, Percent_Identity=30.5418719211823, Blast_Score=68, Evalue=3e-12, Organism=Drosophila melanogaster, GI85725204, Length=191, Percent_Identity=27.2251308900524, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI17737923, Length=191, Percent_Identity=27.2251308900524, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI17933730, Length=186, Percent_Identity=24.7311827956989, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI221378141, Length=196, Percent_Identity=27.0408163265306, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI24646251, Length=192, Percent_Identity=28.6458333333333, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI62472445, Length=183, Percent_Identity=27.8688524590164, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 22867; Mature: 22867
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKVYGDYNSGNCYKVKLMLNLLGSEYEWVPVDILNGETQTPAFLEKNPNGKIPVLELED CEEEEECCCCCCEEEEEEEEHHHCCCCCEEEEEEECCCCCCCCEEECCCCCCEEEEEECC GTCLWESNAILNFLADGSSYLPSEPRLRTQVLQWQFFEQYSHEPSVAVARFIQFYLGLPA CEEEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCH ERMTEYRAMQKAGYRALAVMEQQLDRTPFLVGENFSIADIALYAYTHVAHQGGFDLAPYT HHHHHHHHHHHCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHH GIRRWLDRVKAQPGYIGMLD HHHHHHHHHHCCCCEEECCC >Mature Secondary Structure MYKVYGDYNSGNCYKVKLMLNLLGSEYEWVPVDILNGETQTPAFLEKNPNGKIPVLELED CEEEEECCCCCCEEEEEEEEHHHCCCCCEEEEEEECCCCCCCCEEECCCCCCEEEEEECC GTCLWESNAILNFLADGSSYLPSEPRLRTQVLQWQFFEQYSHEPSVAVARFIQFYLGLPA CEEEEECCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCH ERMTEYRAMQKAGYRALAVMEQQLDRTPFLVGENFSIADIALYAYTHVAHQGGFDLAPYT HHHHHHHHHHHCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHH GIRRWLDRVKAQPGYIGMLD HHHHHHHHHHCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA