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The map label for this gene is yfmJ [H]

Identifier: 66045081

GI number: 66045081

Start: 2117212

End: 2118219

Strand: Reverse

Name: yfmJ [H]

Synonym: Psyr_1837

Alternate gene names: 66045081

Gene position: 2118219-2117212 (Counterclockwise)

Preceding gene: 66045083

Following gene: 66045079

Centisome position: 34.76

GC content: 59.52

Gene sequence:

>1008_bases
ATGACCGATCTTTCCAACCGCCAGTTCCTGCTCGCCAAACGCCCTTCGGGCGATGCGCGCCGTGAAGACTTCACCTATCA
GGAAGTCCCGGTCAGCGCACTTGCCGACGGGCAAATTCTGGTCAGGAGCAAATACCTGTCACTGGACCCGGCAATGCGTG
GCTGGATGAATGAGGGCAAATCCTACATTCCAGCCGTAGAGCTGGGCGAAGTGATGCGTGCCATCGGCGTGGGTGAAGTA
ATAGAATCGAAAAACCCCAAGTTCGCTGTAGGTGACCATGTTCAGGGACGCCTGGGCGTGCAGGACTACTTTGCCGGTGA
ACCGAAGGGCTTCTACAAGGTGGACACCAACCTTGCGCCCCTGCCCCTTTATCTATCGGCACTGGGCATGACCGGCATGA
CCGCCTACCTGGCGCTGCTGGACGTCGGCCAACCGAAAAGCGGTGACACCGTGGTGATTTCCGGTGCGGCTGGCGCTGTC
GGCAGCATCGCCGGGCAGATTGCCAAGCTCAAGGGCTGCCGGGTCGTCGGCATCGCGGGAGGCACGAAAAAATGCCGTCT
GCTGACCGAGGAGCTGGGCTTTGACGCAGCCATCGACTACAAATCCGAAGACGTCATGGACGGTCTGAAACGCCACTGCC
CGGATGGCGTGAACGTGTACTTCGACAACGTCGGTGGCGACATCCTCGATGCGGCGCTCAGCCAGCTGGCGGTCGGCGCG
CGCGTAGTGATCTGTGGTGCCATCAGCCAGTACAACAGCACCAAGGCGATCAAAGGCCCGGCCAACTACATGTCGCTGCT
GGTCAACCGCGCTCGCATGGAAGGCTTCATCGTACTGGACCATCCGGAACGCTATGCAGAAGCGGGTCAGGTCATGGCCG
GCTGGATCAAGGAAGGCAAGCTCAAGAGCAAGGAGCACATCGTAGAAGGCCTCGAGACGTTCCCGGAGACCTTCCAGATG
CTGTTCAGCGGTGAGAATCAGGGCAAGCTGATCCTGAAAGTGGAATAA

Upstream 100 bases:

>100_bases
CCACATGGATCAAACGGCATTCGCTGGGTGATCGCTTCTTGCCCGAATGGCGCGATGAGCGTTTGAATCCATTCTTGAAC
CCTTTTCAGGAGACCCTGCC

Downstream 100 bases:

>100_bases
ACCCGCGGGCTTTTCGCAGCGTCACAGCTCTTCGCCACTCTGTGGGTAGAGCCGTGATGTTACGCATCCATCTACTCAAG
CCAGCTCGGCAACCACCGCC

Product: zinc-containing alcohol dehydrogenase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MTDLSNRQFLLAKRPSGDARREDFTYQEVPVSALADGQILVRSKYLSLDPAMRGWMNEGKSYIPAVELGEVMRAIGVGEV
IESKNPKFAVGDHVQGRLGVQDYFAGEPKGFYKVDTNLAPLPLYLSALGMTGMTAYLALLDVGQPKSGDTVVISGAAGAV
GSIAGQIAKLKGCRVVGIAGGTKKCRLLTEELGFDAAIDYKSEDVMDGLKRHCPDGVNVYFDNVGGDILDAALSQLAVGA
RVVICGAISQYNSTKAIKGPANYMSLLVNRARMEGFIVLDHPERYAEAGQVMAGWIKEGKLKSKEHIVEGLETFPETFQM
LFSGENQGKLILKVE

Sequences:

>Translated_335_residues
MTDLSNRQFLLAKRPSGDARREDFTYQEVPVSALADGQILVRSKYLSLDPAMRGWMNEGKSYIPAVELGEVMRAIGVGEV
IESKNPKFAVGDHVQGRLGVQDYFAGEPKGFYKVDTNLAPLPLYLSALGMTGMTAYLALLDVGQPKSGDTVVISGAAGAV
GSIAGQIAKLKGCRVVGIAGGTKKCRLLTEELGFDAAIDYKSEDVMDGLKRHCPDGVNVYFDNVGGDILDAALSQLAVGA
RVVICGAISQYNSTKAIKGPANYMSLLVNRARMEGFIVLDHPERYAEAGQVMAGWIKEGKLKSKEHIVEGLETFPETFQM
LFSGENQGKLILKVE
>Mature_334_residues
TDLSNRQFLLAKRPSGDARREDFTYQEVPVSALADGQILVRSKYLSLDPAMRGWMNEGKSYIPAVELGEVMRAIGVGEVI
ESKNPKFAVGDHVQGRLGVQDYFAGEPKGFYKVDTNLAPLPLYLSALGMTGMTAYLALLDVGQPKSGDTVVISGAAGAVG
SIAGQIAKLKGCRVVGIAGGTKKCRLLTEELGFDAAIDYKSEDVMDGLKRHCPDGVNVYFDNVGGDILDAALSQLAVGAR
VVICGAISQYNSTKAIKGPANYMSLLVNRARMEGFIVLDHPERYAEAGQVMAGWIKEGKLKSKEHIVEGLETFPETFQML
FSGENQGKLILKVE

Specific function: Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds (Potential) [H]

COG id: COG2130

COG function: function code R; Putative NADP-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NADP-dependent oxidoreductase L4BD family [H]

Homologues:

Organism=Homo sapiens, GI226246682, Length=347, Percent_Identity=39.4812680115274, Blast_Score=225, Evalue=5e-59,
Organism=Homo sapiens, GI226246680, Length=347, Percent_Identity=39.4812680115274, Blast_Score=225, Evalue=5e-59,
Organism=Homo sapiens, GI22748929, Length=347, Percent_Identity=39.4812680115274, Blast_Score=225, Evalue=5e-59,
Organism=Homo sapiens, GI226059159, Length=337, Percent_Identity=35.9050445103858, Blast_Score=199, Evalue=4e-51,
Organism=Homo sapiens, GI226059133, Length=337, Percent_Identity=35.9050445103858, Blast_Score=199, Evalue=4e-51,
Organism=Homo sapiens, GI226056130, Length=309, Percent_Identity=34.6278317152104, Blast_Score=167, Evalue=1e-41,
Organism=Homo sapiens, GI28557745, Length=350, Percent_Identity=29.1428571428571, Blast_Score=113, Evalue=2e-25,
Organism=Escherichia coli, GI226510941, Length=334, Percent_Identity=43.4131736526946, Blast_Score=284, Evalue=7e-78,
Organism=Caenorhabditis elegans, GI133901712, Length=354, Percent_Identity=33.8983050847458, Blast_Score=184, Evalue=7e-47,
Organism=Caenorhabditis elegans, GI133901710, Length=354, Percent_Identity=33.8983050847458, Blast_Score=184, Evalue=7e-47,
Organism=Saccharomyces cerevisiae, GI6323504, Length=332, Percent_Identity=33.7349397590361, Blast_Score=145, Evalue=6e-36,
Organism=Saccharomyces cerevisiae, GI6319520, Length=329, Percent_Identity=24.9240121580547, Blast_Score=69, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00107 ADH_zinc_N [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 36086; Mature: 35955

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLSNRQFLLAKRPSGDARREDFTYQEVPVSALADGQILVRSKYLSLDPAMRGWMNEGK
CCCCCCCEEEEEECCCCCCCCCCCCHHHCCHHHHCCCEEEEEEECCCCCHHHHHHHHCCC
SYIPAVELGEVMRAIGVGEVIESKNPKFAVGDHVQGRLGVQDYFAGEPKGFYKVDTNLAP
CCCCHHHHHHHHHHHCHHHHHHCCCCCEEECCCCCCCCCCHHHHCCCCCCEEEECCCCCC
LPLYLSALGMTGMTAYLALLDVGQPKSGDTVVISGAAGAVGSIAGQIAKLKGCRVVGIAG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECC
GTKKCRLLTEELGFDAAIDYKSEDVMDGLKRHCPDGVNVYFDNVGGDILDAALSQLAVGA
CCHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCC
RVVICGAISQYNSTKAIKGPANYMSLLVNRARMEGFIVLDHPERYAEAGQVMAGWIKEGK
EEEEEECHHHCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHCCC
LKSKEHIVEGLETFPETFQMLFSGENQGKLILKVE
CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
>Mature Secondary Structure 
TDLSNRQFLLAKRPSGDARREDFTYQEVPVSALADGQILVRSKYLSLDPAMRGWMNEGK
CCCCCCEEEEEECCCCCCCCCCCCHHHCCHHHHCCCEEEEEEECCCCCHHHHHHHHCCC
SYIPAVELGEVMRAIGVGEVIESKNPKFAVGDHVQGRLGVQDYFAGEPKGFYKVDTNLAP
CCCCHHHHHHHHHHHCHHHHHHCCCCCEEECCCCCCCCCCHHHHCCCCCCEEEECCCCCC
LPLYLSALGMTGMTAYLALLDVGQPKSGDTVVISGAAGAVGSIAGQIAKLKGCRVVGIAG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECC
GTKKCRLLTEELGFDAAIDYKSEDVMDGLKRHCPDGVNVYFDNVGGDILDAALSQLAVGA
CCHHHHHHHHHCCCCEEECCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHCCC
RVVICGAISQYNSTKAIKGPANYMSLLVNRARMEGFIVLDHPERYAEAGQVMAGWIKEGK
EEEEEECHHHCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHCCC
LKSKEHIVEGLETFPETFQMLFSGENQGKLILKVE
CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]