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The map label for this gene is ynaI [C]

Identifier: 66045066

GI number: 66045066

Start: 2102041

End: 2103165

Strand: Direct

Name: ynaI [C]

Synonym: Psyr_1822

Alternate gene names: 66045066

Gene position: 2102041-2103165 (Clockwise)

Preceding gene: 66045064

Following gene: 66045069

Centisome position: 34.5

GC content: 58.49

Gene sequence:

>1125_bases
ATGGAACAGGACATCATCAGATTTTTCACAGACTCGCAATTTCTGGGCATATCGCTCGCTAACTGGATACTGGCTATTTT
TGCCTCGACCCTGAGTTTTATTCTGGTCAGGGGCGTGATCGGTTTTGTGCTCAGAAAGATGCGTTCGCGTGCCCAGGCGC
CCAGCACGCATATGCGATACATCGTGGTTCAGGTGCTGTCGGGCACCAGTAATACGTTATTGCTGCTGGCTTCGATCCTG
ATCGGCATTGGCATGCTCGATCTGCCGGAGCGCTGGCTCGGGCGGGTCAGCAGTCTGTGGTTCGTGGTTGCGGCATTGCA
GGTCGGGCTATGGGCGAACCGGGCGATCGCGCTGGCGTTGCAGCGCTACTTCGTGCGTCACAACGCCGGCGGCACCTTTC
AGGGCAGTGCGCTGGCCACGTTGAGTCTGTGGGGCGCGAAGGTGTTGCTGTGGGCCACGGTGGTCATGGCGATGCTGTCC
AACGTCGGGGTCAATATCACCGCGTTTGTCGCCAGCCTCGGGGTCGGCGGCATTGCGGTCGCGCTGGCGGTGCAGAACAT
TCTGGGCGACGTGTTTGCCTCGCTGTCGATTGCGGTGGACAAGCCTTTCGAGGTCGGCGACTTCATCGTCGTCGGTGCGC
TGTCCGGCACGGTCGAGCACGTGGGCCTGAAGACCACACGGATCCGCAGCCTGGGTGGCGAGCAGATCGTGATGGCCAAC
GCCGACATGATCAACAACACCATCCAGAACTACAAACGCTTGCAGGAACGACGCATTGTCTTTGAGTTCAGGCTGACCTA
TGACTGCTCGGTCGATCAGATAAGGGAAGTGCCGAAGAAAGTCGAAGCGATCATCAACGCGCAGAAACTTGCACGTTTCG
ACCGTTCGCATTTTCGGGGTTTTGGCGAGACATCACTGGAGTTCGAGACCGTTTTCATCGTGCTCGACCCCAGCTACAAC
GTCTATATGGATGTGCAGCAGGCGATCAATCTGGACATCATGGAAGCCTTTGCCGAACTGGATGTGCGTTTCGCGTTCCC
GTCCCGCACGGTGTACGTGGCGTCCCTGCCACCGGTTAAAACCGCTCGTCCGACTGCGCTTGAAGCAGCCGACGCGACGA
CCTGA

Upstream 100 bases:

>100_bases
CGTCGCTTGAAACCGTTTTACGGCAAGGGGCAATTCAAGTCGCTGCGGGTGTCACAGGCTTTTCGGTCAGGCGTCTCGCA
GCAGTGAAGCCGGGGGCCGG

Downstream 100 bases:

>100_bases
TCGAATCAGGCCGGAAACTGCAGCGCGTTGGTCAGGTCGCCCATTGGCGTCTGGCCACGCGCGATCATGGCCTCGTCGCG
GCGTTTCAGGCCGTCGAGCT

Product: MscS mechanosensitive ion channel

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MEQDIIRFFTDSQFLGISLANWILAIFASTLSFILVRGVIGFVLRKMRSRAQAPSTHMRYIVVQVLSGTSNTLLLLASIL
IGIGMLDLPERWLGRVSSLWFVVAALQVGLWANRAIALALQRYFVRHNAGGTFQGSALATLSLWGAKVLLWATVVMAMLS
NVGVNITAFVASLGVGGIAVALAVQNILGDVFASLSIAVDKPFEVGDFIVVGALSGTVEHVGLKTTRIRSLGGEQIVMAN
ADMINNTIQNYKRLQERRIVFEFRLTYDCSVDQIREVPKKVEAIINAQKLARFDRSHFRGFGETSLEFETVFIVLDPSYN
VYMDVQQAINLDIMEAFAELDVRFAFPSRTVYVASLPPVKTARPTALEAADATT

Sequences:

>Translated_374_residues
MEQDIIRFFTDSQFLGISLANWILAIFASTLSFILVRGVIGFVLRKMRSRAQAPSTHMRYIVVQVLSGTSNTLLLLASIL
IGIGMLDLPERWLGRVSSLWFVVAALQVGLWANRAIALALQRYFVRHNAGGTFQGSALATLSLWGAKVLLWATVVMAMLS
NVGVNITAFVASLGVGGIAVALAVQNILGDVFASLSIAVDKPFEVGDFIVVGALSGTVEHVGLKTTRIRSLGGEQIVMAN
ADMINNTIQNYKRLQERRIVFEFRLTYDCSVDQIREVPKKVEAIINAQKLARFDRSHFRGFGETSLEFETVFIVLDPSYN
VYMDVQQAINLDIMEAFAELDVRFAFPSRTVYVASLPPVKTARPTALEAADATT
>Mature_374_residues
MEQDIIRFFTDSQFLGISLANWILAIFASTLSFILVRGVIGFVLRKMRSRAQAPSTHMRYIVVQVLSGTSNTLLLLASIL
IGIGMLDLPERWLGRVSSLWFVVAALQVGLWANRAIALALQRYFVRHNAGGTFQGSALATLSLWGAKVLLWATVVMAMLS
NVGVNITAFVASLGVGGIAVALAVQNILGDVFASLSIAVDKPFEVGDFIVVGALSGTVEHVGLKTTRIRSLGGEQIVMAN
ADMINNTIQNYKRLQERRIVFEFRLTYDCSVDQIREVPKKVEAIINAQKLARFDRSHFRGFGETSLEFETVFIVLDPSYN
VYMDVQQAINLDIMEAFAELDVRFAFPSRTVYVASLPPVKTARPTALEAADATT

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI1787591, Length=225, Percent_Identity=25.3333333333333, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1789291, Length=270, Percent_Identity=29.2592592592593, Blast_Score=85, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 41113; Mature: 41113

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQDIIRFFTDSQFLGISLANWILAIFASTLSFILVRGVIGFVLRKMRSRAQAPSTHMRY
CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
IVVQVLSGTSNTLLLLASILIGIGMLDLPERWLGRVSSLWFVVAALQVGLWANRAIALAL
HHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRYFVRHNAGGTFQGSALATLSLWGAKVLLWATVVMAMLSNVGVNITAFVASLGVGGIAV
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHH
ALAVQNILGDVFASLSIAVDKPFEVGDFIVVGALSGTVEHVGLKTTRIRSLGGEQIVMAN
HHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEECCCCHHHCCCCHHHHHHCCCCEEEEEC
ADMINNTIQNYKRLQERRIVFEFRLTYDCSVDQIREVPKKVEAIINAQKLARFDRSHFRG
HHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FGETSLEFETVFIVLDPSYNVYMDVQQAINLDIMEAFAELDVRFAFPSRTVYVASLPPVK
CCCCCEEEEEEEEEECCCCCEEEEHHHHHCHHHHHHHHHCCEEEECCCCEEEEEECCCCC
TARPTALEAADATT
CCCCCCCCCCCCCC
>Mature Secondary Structure
MEQDIIRFFTDSQFLGISLANWILAIFASTLSFILVRGVIGFVLRKMRSRAQAPSTHMRY
CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
IVVQVLSGTSNTLLLLASILIGIGMLDLPERWLGRVSSLWFVVAALQVGLWANRAIALAL
HHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRYFVRHNAGGTFQGSALATLSLWGAKVLLWATVVMAMLSNVGVNITAFVASLGVGGIAV
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHH
ALAVQNILGDVFASLSIAVDKPFEVGDFIVVGALSGTVEHVGLKTTRIRSLGGEQIVMAN
HHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEECCCCHHHCCCCHHHHHHCCCCEEEEEC
ADMINNTIQNYKRLQERRIVFEFRLTYDCSVDQIREVPKKVEAIINAQKLARFDRSHFRG
HHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FGETSLEFETVFIVLDPSYNVYMDVQQAINLDIMEAFAELDVRFAFPSRTVYVASLPPVK
CCCCCEEEEEEEEEECCCCCEEEEHHHHHCHHHHHHHHHCCEEEECCCCEEEEEECCCCC
TARPTALEAADATT
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]