| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is yejA [C]
Identifier: 66045003
GI number: 66045003
Start: 1997504
End: 1999360
Strand: Reverse
Name: yejA [C]
Synonym: Psyr_1758
Alternate gene names: 66045003
Gene position: 1999360-1997504 (Counterclockwise)
Preceding gene: 66045004
Following gene: 66045002
Centisome position: 32.81
GC content: 60.2
Gene sequence:
>1857_bases ATGAACCCTCTGCACTCCCTGCGCTCGCAGGCAGCCGGCCTGCTGCTGGCCAGCCTCGCCTGCACGGTACAGGCTGCGCC TCAGCATGGCGTGACGCTGTACGACGAAGCGCCGAAATACCCGGCTGATTTCAAGCATTTCGACTACGTGAACCCGGATG CCCCCAAGGGCGGCACGCTGCGCCAGGCAGGCTTCGGCGGTTTCGACAGTCTCAACCCGTTCATCAACAAGGGCGTACCG GCAGACGACATTGGTCTGATCTACGACACCCTGGCCCGCGCTAGCCTGGACGAACCCTTCAGTGAATACGGGCTGGTTGC CGGCAAAATCGAGAAAGCGCCGGACAACAGCTGGGTGCGCTTCTACCTGCGGCCTGAAGCACGCTTCCATGACGGCCACC CGATCCGCGCCGAAGATGTGGAATTCAGCTTCAAGACCCTGATGGAACACGGCTCGCCCATGTACAAGGGCTACTACGCC GACGTCGATCAGGTCGTCGTCGAAGACCCGCTGCGGGTGCTGTTCAAATTCAAGCACAAGGGCAGCCGCGAAATGCCGCT GATTCTTGGCCAGTTGCCCGTGCTGCCCAAGCACTTCTGGGCCGACCGCGACTTCAGCAAAGGCAACCTGGACTTCCCGC TGGGCAGCGGGCCGTACAAGGTGGTCGATGTAAAAGCCGGGCGCTCGGTGAGTTATGAGCGGGTCAAGGATTACTGGGCA AAGGATTTGCCGATCAACAAGGGTTTCTACAACTTCGATGTACTGACCACCGACTACTACCGCGACAACACAGTAGCGCT GGAGGCCGGCAAGGCCGGGCAGTTCGACTACTGGATAGAGACCAGCGCCAAGAACTGGGCGACCGCCTACAACACCCCGG CAGTTCGCGATGGCAGGCTGGTCAAGGAAGAGCTGCCCAACGGTAACCCGACCGGTATGCAGGGGTTCGTTTTCAACTTG CGCAAACCGGTATTCCAGGACGCGCGGGTGCGCGAAGCGCTGACCTTGCTGCTGGATTTCGAGTGGACCAACAAACAGCT TTTCAACGGTGCCTACAGCCGTACCAAAAGTTATTTCGACAACTCGGAAATGGCCTCAAGCGGCCTGCCCTCTGCCGAGG AACTGAAAATCCTCGAACCGCTGCGCGGCAAGATTCCGGATCGGGTATTCACCGAGGCTTTTCAGTTACCGGTTAACGAC GGCAGCGGCATGATTCGCCCACAACAACGTCGGGCATTCCAGCTGTTGCAGGAAGCGGGCTGGAAGATCGTCGACGACAA GATGGTCGACGCGCAGGGCAACCCGGTAAAACTGGAGTTTCTGATCGCCCAGACCGAGTTCGAGCGCATTCTGCTGCCTT ACAAGCGCAACCTGAGTGACCTGGGTATTGAACTGGTGATCCGCCGGGCCGACGTGTCGCAATACATTAACCGCCTGCGC TCGCGGGACTACGACATGATCGTCACGGGCTATCCGCAGTCCAGCTCGCCCGGTAACGAACAGCGCGTGTACTTCGACTC CTCCAGCGCCGACAACCCGGGCAGCCGCAACTTCATGGGCCTCAAGGACCCTGCGGTGGACTCTCTCGTCAACGGCCTGA TCAACGCCGACTCACGGCAAAGCCTGATCACCCATACCAAGGCGCTGGACCGCGTGCTGCTGTGGGGCTTTTACGTCGTC CCGAACTGGCACATCAAGACCTGGCGGGTGGCTTACTGGAATCACCTCGACCATCCCAAGGCCGAAGCGCTTTCCGATAT CGGCCTGATGACCTGGTGGGCCAAGCCGGATGTCAAACCGGTGACCGCGACCCCGTCAGCCCCTGATCAGGCCAAGCCTG CGAACGCGGAGCAATAA
Upstream 100 bases:
>100_bases ATCATCGGCTTGCCTATCGCAACCGATTCGCCATGGTCACTACCCCGCCCTATACCCTGGGGCTGCGTGCGTGGTGGCTC AAGACTCTGGAGAAGCCCCG
Downstream 100 bases:
>100_bases ACATGCTGGCTTATATTCTGCGACGGCTGCTGCTGATCATCCCTACCCTGCTGGGCATCCTGATCATCAACTTCGTCATC ATTCAGGCCGCCCCCGGTGG
Product: extracellular solute-binding protein
Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 618; Mature: 618
Protein sequence:
>618_residues MNPLHSLRSQAAGLLLASLACTVQAAPQHGVTLYDEAPKYPADFKHFDYVNPDAPKGGTLRQAGFGGFDSLNPFINKGVP ADDIGLIYDTLARASLDEPFSEYGLVAGKIEKAPDNSWVRFYLRPEARFHDGHPIRAEDVEFSFKTLMEHGSPMYKGYYA DVDQVVVEDPLRVLFKFKHKGSREMPLILGQLPVLPKHFWADRDFSKGNLDFPLGSGPYKVVDVKAGRSVSYERVKDYWA KDLPINKGFYNFDVLTTDYYRDNTVALEAGKAGQFDYWIETSAKNWATAYNTPAVRDGRLVKEELPNGNPTGMQGFVFNL RKPVFQDARVREALTLLLDFEWTNKQLFNGAYSRTKSYFDNSEMASSGLPSAEELKILEPLRGKIPDRVFTEAFQLPVND GSGMIRPQQRRAFQLLQEAGWKIVDDKMVDAQGNPVKLEFLIAQTEFERILLPYKRNLSDLGIELVIRRADVSQYINRLR SRDYDMIVTGYPQSSSPGNEQRVYFDSSSADNPGSRNFMGLKDPAVDSLVNGLINADSRQSLITHTKALDRVLLWGFYVV PNWHIKTWRVAYWNHLDHPKAEALSDIGLMTWWAKPDVKPVTATPSAPDQAKPANAEQ
Sequences:
>Translated_618_residues MNPLHSLRSQAAGLLLASLACTVQAAPQHGVTLYDEAPKYPADFKHFDYVNPDAPKGGTLRQAGFGGFDSLNPFINKGVP ADDIGLIYDTLARASLDEPFSEYGLVAGKIEKAPDNSWVRFYLRPEARFHDGHPIRAEDVEFSFKTLMEHGSPMYKGYYA DVDQVVVEDPLRVLFKFKHKGSREMPLILGQLPVLPKHFWADRDFSKGNLDFPLGSGPYKVVDVKAGRSVSYERVKDYWA KDLPINKGFYNFDVLTTDYYRDNTVALEAGKAGQFDYWIETSAKNWATAYNTPAVRDGRLVKEELPNGNPTGMQGFVFNL RKPVFQDARVREALTLLLDFEWTNKQLFNGAYSRTKSYFDNSEMASSGLPSAEELKILEPLRGKIPDRVFTEAFQLPVND GSGMIRPQQRRAFQLLQEAGWKIVDDKMVDAQGNPVKLEFLIAQTEFERILLPYKRNLSDLGIELVIRRADVSQYINRLR SRDYDMIVTGYPQSSSPGNEQRVYFDSSSADNPGSRNFMGLKDPAVDSLVNGLINADSRQSLITHTKALDRVLLWGFYVV PNWHIKTWRVAYWNHLDHPKAEALSDIGLMTWWAKPDVKPVTATPSAPDQAKPANAEQ >Mature_618_residues MNPLHSLRSQAAGLLLASLACTVQAAPQHGVTLYDEAPKYPADFKHFDYVNPDAPKGGTLRQAGFGGFDSLNPFINKGVP ADDIGLIYDTLARASLDEPFSEYGLVAGKIEKAPDNSWVRFYLRPEARFHDGHPIRAEDVEFSFKTLMEHGSPMYKGYYA DVDQVVVEDPLRVLFKFKHKGSREMPLILGQLPVLPKHFWADRDFSKGNLDFPLGSGPYKVVDVKAGRSVSYERVKDYWA KDLPINKGFYNFDVLTTDYYRDNTVALEAGKAGQFDYWIETSAKNWATAYNTPAVRDGRLVKEELPNGNPTGMQGFVFNL RKPVFQDARVREALTLLLDFEWTNKQLFNGAYSRTKSYFDNSEMASSGLPSAEELKILEPLRGKIPDRVFTEAFQLPVND GSGMIRPQQRRAFQLLQEAGWKIVDDKMVDAQGNPVKLEFLIAQTEFERILLPYKRNLSDLGIELVIRRADVSQYINRLR SRDYDMIVTGYPQSSSPGNEQRVYFDSSSADNPGSRNFMGLKDPAVDSLVNGLINADSRQSLITHTKALDRVLLWGFYVV PNWHIKTWRVAYWNHLDHPKAEALSDIGLMTWWAKPDVKPVTATPSAPDQAKPANAEQ
Specific function: Unknown
COG id: COG4166
COG function: function code E; ABC-type oligopeptide transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI87082063, Length=601, Percent_Identity=39.6006655574043, Blast_Score=442, Evalue=1e-125,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 69752; Mature: 69752
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPLHSLRSQAAGLLLASLACTVQAAPQHGVTLYDEAPKYPADFKHFDYVNPDAPKGGTL CCHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC RQAGFGGFDSLNPFINKGVPADDIGLIYDTLARASLDEPFSEYGLVAGKIEKAPDNSWVR CCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHCCEEEECCCCCCCCEEE FYLRPEARFHDGHPIRAEDVEFSFKTLMEHGSPMYKGYYADVDQVVVEDPLRVLFKFKHK EEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC GSREMPLILGQLPVLPKHFWADRDFSKGNLDFPLGSGPYKVVDVKAGRSVSYERVKDYWA CCCCCCEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHH KDLPINKGFYNFDVLTTDYYRDNTVALEAGKAGQFDYWIETSAKNWATAYNTPAVRDGRL HCCCCCCCEEEEEEEEECEECCCEEEEECCCCCCEEEEEECCCCCCEEECCCCCCCCCCH VKEELPNGNPTGMQGFVFNLRKPVFQDARVREALTLLLDFEWTNKQLFNGAYSRTKSYFD HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHCC NSEMASSGLPSAEELKILEPLRGKIPDRVFTEAFQLPVNDGSGMIRPQQRRAFQLLQEAG CCHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC WKIVDDKMVDAQGNPVKLEFLIAQTEFERILLPYKRNLSDLGIELVIRRADVSQYINRLR CEEECCEEECCCCCCEEEEEEEEECCHHHHHCCHHCCHHHCCEEEEEEHHHHHHHHHHHH SRDYDMIVTGYPQSSSPGNEQRVYFDSSSADNPGSRNFMGLKDPAVDSLVNGLINADSRQ CCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHH SLITHTKALDRVLLWGFYVVPNWHIKTWRVAYWNHLDHPKAEALSDIGLMTWWAKPDVKP HHHHHHHHHHHHHHHHEEEECCCEEEEEEEEECCCCCCCHHHHHHHCCEEEEECCCCCCE VTATPSAPDQAKPANAEQ EECCCCCCCCCCCCCCCC >Mature Secondary Structure MNPLHSLRSQAAGLLLASLACTVQAAPQHGVTLYDEAPKYPADFKHFDYVNPDAPKGGTL CCHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC RQAGFGGFDSLNPFINKGVPADDIGLIYDTLARASLDEPFSEYGLVAGKIEKAPDNSWVR CCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHCCEEEECCCCCCCCEEE FYLRPEARFHDGHPIRAEDVEFSFKTLMEHGSPMYKGYYADVDQVVVEDPLRVLFKFKHK EEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC GSREMPLILGQLPVLPKHFWADRDFSKGNLDFPLGSGPYKVVDVKAGRSVSYERVKDYWA CCCCCCEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHH KDLPINKGFYNFDVLTTDYYRDNTVALEAGKAGQFDYWIETSAKNWATAYNTPAVRDGRL HCCCCCCCEEEEEEEEECEECCCEEEEECCCCCCEEEEEECCCCCCEEECCCCCCCCCCH VKEELPNGNPTGMQGFVFNLRKPVFQDARVREALTLLLDFEWTNKQLFNGAYSRTKSYFD HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHCC NSEMASSGLPSAEELKILEPLRGKIPDRVFTEAFQLPVNDGSGMIRPQQRRAFQLLQEAG CCHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC WKIVDDKMVDAQGNPVKLEFLIAQTEFERILLPYKRNLSDLGIELVIRRADVSQYINRLR CEEECCEEECCCCCCEEEEEEEEECCHHHHHCCHHCCHHHCCEEEEEEHHHHHHHHHHHH SRDYDMIVTGYPQSSSPGNEQRVYFDSSSADNPGSRNFMGLKDPAVDSLVNGLINADSRQ CCCCCEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHH SLITHTKALDRVLLWGFYVVPNWHIKTWRVAYWNHLDHPKAEALSDIGLMTWWAKPDVKP HHHHHHHHHHHHHHHHEEEECCCEEEEEEEEECCCCCCCHHHHHHHCCEEEEECCCCCCE VTATPSAPDQAKPANAEQ EECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; oligopeptides [Periplasm]; H2O [C]
Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA