| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is yejA [C]
Identifier: 66045004
GI number: 66045004
Start: 1999357
End: 2001186
Strand: Reverse
Name: yejA [C]
Synonym: Psyr_1759
Alternate gene names: 66045004
Gene position: 2001186-1999357 (Counterclockwise)
Preceding gene: 66045005
Following gene: 66045003
Centisome position: 32.84
GC content: 61.04
Gene sequence:
>1830_bases GTGATACGTCCCTTCCTGCTAACCCTCAGCCTGGCCTTGAGCTTCTGCGCCAACGCAGCCATTACTGAAAGTCATGGTTA CGCGCAGTTTGGTGTTCTCAAGTACCCGGCCAGCTTCACTCATTTCGACTGGGTCAATCCCGAGGCGCCGAAAGGTGGCA CCCTGAGAATGATGGCCTTCGGCACGTTCGACACGCTCAACCCCTACACATTCAAGGGCAGCAGCCCGGTCTCGACCGGC AACTTCCTGCAATATGGCGTCAACGAGCTGAATGAACCGCTGATGGTCGGCACGGGCCAGTACGACCCGTCCGGCGATGA ACCGACCTCCAGTTACGGGCTGATCGCCCAGTCCGTGGAATACAGCGAGGACCGCAGCTGGGTGGTGTTCAACCTGCGCC CACAGGCGCGCTTCCATGACGGCAAGCCCATCACCGCCTACGACGTGGCGTTTTCCTACCGGACACTGCTCAAGGACGGT CACCCTCAATACCGCACCGCCCTGCAGGAAGTGCAGCGCGTCGACATCCTCAATCGTCATCGCATCCGCTTTGTCTTCAA GCGCTCCGGCAACCCGCTGCTGATCCTGCGCCTGGGCGAACTGCCAGTGTTGCCGCAGCATTACTGGAAAGACAGGGATT TCAAGGCGACCACCTTCGAGCCGCCGCTGGGCAGTGGTCCCTACCGCATCACCCGCGTGCAGCCGGGTCGGCAACTGGTG TTCGAGCGGGTCAAGGATTACTGGGGCAAGGACTTGCCGGTCAACCGCGGCAAATACAATTTCGACCGCGTCGAGGTCGA GTTCTACCGCGACAGCGACGTGGCGTTCGAAGCGTTCAAGGCGGGTGAATTCGACATCTACATCGAGCATCAGGCCAAGA ACTGGGCCAATGGCTATGACTTCCCTGCAGTCGCCAACGGTCAGGTGATCAAGGCGCAGATTCCGCACCGCATACCGACC CAGACCCAGGGCCTGTTCATGAACACGCGGCGCGCCGCCTTCGCCGACATCCGCGTGCGCGAAGCCCTGGGGCTGCTGTT CAATTTCGAATGGACCAACCGCACGCTGTTCAGCGACGCCTATGACCGCTCGACCAGTTACTACCCCAACAGCGAATTTT CCGCGACGGGCCTGCCGACCGGGGCTGAATGGCTGCTCCTGGCGCCCTACCGTGATCAGTTGCCTGCCAGCCTGTTCACC CAGCCGTTCGCCCCGTCGAAAACCGATGGCGGCGGGATCCCGCGCGAGACCTTGCGCAAGGCCCTGAAGCTGCTTGCCGA GGCAGGCTGGACGCTCTCGGACAAGGGTTTGCTCAATGCCGACAAGCAACCTTTGCGCTTCGAGATCCTGCTGGTCAATC CCAACCTGGAACGCATTCTGCAACCCTACATCGAAGACCTGCGCCGCCTGGGAATCAATGCAGGACTGCGTACCGTCGAC CGCGCCCAATACAAGCAACGCCTGGACCGTTTCGATTTCGACATGATTCTGATGACCCTGCAACAGACCCTGAGCCCCGG TCTGGAGCAGTGGCAATACTTCCATTCCAGTCAGGCCGCGATCAACGGCAGCAAGAACTACGCGGGTATCGCCAACCCCG TGGTCGATGCCCTGCTGAACAAACTGCTGGCCGCGCAGACCCGCGACGATCAGGTCGCCGCGGCGCGGGCGCTGGACCGC GTACTGCTGTCTCAGCACTACAGCATTCCCAACTGGTATCTGAACAATCATCGGCTTGCCTATCGCAACCGATTCGCCAT GGTCACTACCCCGCCCTATACCCTGGGGCTGCGTGCGTGGTGGCTCAAGACTCTGGAGAAGCCCCGATGA
Upstream 100 bases:
>100_bases GGTGGCCGATGCAGCCCCGGCAACGCCATCACCTGCAGTCTTTTTCCAGCTGGAACAAGCTGTTACTGTTAGCGACCCGA AAGCCCAAGCCGCCTGGATC
Downstream 100 bases:
>100_bases ACCCTCTGCACTCCCTGCGCTCGCAGGCAGCCGGCCTGCTGCTGGCCAGCCTCGCCTGCACGGTACAGGCTGCGCCTCAG CATGGCGTGACGCTGTACGA
Product: extracellular solute-binding protein
Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 609; Mature: 609
Protein sequence:
>609_residues MIRPFLLTLSLALSFCANAAITESHGYAQFGVLKYPASFTHFDWVNPEAPKGGTLRMMAFGTFDTLNPYTFKGSSPVSTG NFLQYGVNELNEPLMVGTGQYDPSGDEPTSSYGLIAQSVEYSEDRSWVVFNLRPQARFHDGKPITAYDVAFSYRTLLKDG HPQYRTALQEVQRVDILNRHRIRFVFKRSGNPLLILRLGELPVLPQHYWKDRDFKATTFEPPLGSGPYRITRVQPGRQLV FERVKDYWGKDLPVNRGKYNFDRVEVEFYRDSDVAFEAFKAGEFDIYIEHQAKNWANGYDFPAVANGQVIKAQIPHRIPT QTQGLFMNTRRAAFADIRVREALGLLFNFEWTNRTLFSDAYDRSTSYYPNSEFSATGLPTGAEWLLLAPYRDQLPASLFT QPFAPSKTDGGGIPRETLRKALKLLAEAGWTLSDKGLLNADKQPLRFEILLVNPNLERILQPYIEDLRRLGINAGLRTVD RAQYKQRLDRFDFDMILMTLQQTLSPGLEQWQYFHSSQAAINGSKNYAGIANPVVDALLNKLLAAQTRDDQVAAARALDR VLLSQHYSIPNWYLNNHRLAYRNRFAMVTTPPYTLGLRAWWLKTLEKPR
Sequences:
>Translated_609_residues MIRPFLLTLSLALSFCANAAITESHGYAQFGVLKYPASFTHFDWVNPEAPKGGTLRMMAFGTFDTLNPYTFKGSSPVSTG NFLQYGVNELNEPLMVGTGQYDPSGDEPTSSYGLIAQSVEYSEDRSWVVFNLRPQARFHDGKPITAYDVAFSYRTLLKDG HPQYRTALQEVQRVDILNRHRIRFVFKRSGNPLLILRLGELPVLPQHYWKDRDFKATTFEPPLGSGPYRITRVQPGRQLV FERVKDYWGKDLPVNRGKYNFDRVEVEFYRDSDVAFEAFKAGEFDIYIEHQAKNWANGYDFPAVANGQVIKAQIPHRIPT QTQGLFMNTRRAAFADIRVREALGLLFNFEWTNRTLFSDAYDRSTSYYPNSEFSATGLPTGAEWLLLAPYRDQLPASLFT QPFAPSKTDGGGIPRETLRKALKLLAEAGWTLSDKGLLNADKQPLRFEILLVNPNLERILQPYIEDLRRLGINAGLRTVD RAQYKQRLDRFDFDMILMTLQQTLSPGLEQWQYFHSSQAAINGSKNYAGIANPVVDALLNKLLAAQTRDDQVAAARALDR VLLSQHYSIPNWYLNNHRLAYRNRFAMVTTPPYTLGLRAWWLKTLEKPR >Mature_609_residues MIRPFLLTLSLALSFCANAAITESHGYAQFGVLKYPASFTHFDWVNPEAPKGGTLRMMAFGTFDTLNPYTFKGSSPVSTG NFLQYGVNELNEPLMVGTGQYDPSGDEPTSSYGLIAQSVEYSEDRSWVVFNLRPQARFHDGKPITAYDVAFSYRTLLKDG HPQYRTALQEVQRVDILNRHRIRFVFKRSGNPLLILRLGELPVLPQHYWKDRDFKATTFEPPLGSGPYRITRVQPGRQLV FERVKDYWGKDLPVNRGKYNFDRVEVEFYRDSDVAFEAFKAGEFDIYIEHQAKNWANGYDFPAVANGQVIKAQIPHRIPT QTQGLFMNTRRAAFADIRVREALGLLFNFEWTNRTLFSDAYDRSTSYYPNSEFSATGLPTGAEWLLLAPYRDQLPASLFT QPFAPSKTDGGGIPRETLRKALKLLAEAGWTLSDKGLLNADKQPLRFEILLVNPNLERILQPYIEDLRRLGINAGLRTVD RAQYKQRLDRFDFDMILMTLQQTLSPGLEQWQYFHSSQAAINGSKNYAGIANPVVDALLNKLLAAQTRDDQVAAARALDR VLLSQHYSIPNWYLNNHRLAYRNRFAMVTTPPYTLGLRAWWLKTLEKPR
Specific function: Unknown
COG id: COG4166
COG function: function code E; ABC-type oligopeptide transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI87082063, Length=604, Percent_Identity=40.0662251655629, Blast_Score=436, Evalue=1e-123, Organism=Escherichia coli, GI1787762, Length=195, Percent_Identity=30.2564102564103, Blast_Score=64, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 69574; Mature: 69574
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRPFLLTLSLALSFCANAAITESHGYAQFGVLKYPASFTHFDWVNPEAPKGGTLRMMAF CCCHHHHHHHHHHHHHCCCCEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEE GTFDTLNPYTFKGSSPVSTGNFLQYGVNELNEPLMVGTGQYDPSGDEPTSSYGLIAQSVE CCCCCCCCEEECCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHEECCC YSEDRSWVVFNLRPQARFHDGKPITAYDVAFSYRTLLKDGHPQYRTALQEVQRVDILNRH CCCCCCEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC RIRFVFKRSGNPLLILRLGELPVLPQHYWKDRDFKATTFEPPLGSGPYRITRVQPGRQLV EEEEEEEECCCEEEEEEECCCCCCCHHHCCCCCCCEEECCCCCCCCCEEEEEECCHHHHH FERVKDYWGKDLPVNRGKYNFDRVEVEFYRDSDVAFEAFKAGEFDIYIEHQAKNWANGYD HHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCEEHHHCCCCEEEEEEECCCCCCCCCC FPAVANGQVIKAQIPHRIPTQTQGLFMNTRRAAFADIRVREALGLLFNFEWTNRTLFSDA CCCCCCCCEEEEECCCCCCCCCCCEEEECCHHHHHHHHHHHHHCEEEEEEECCCEEEHHH YDRSTSYYPNSEFSATGLPTGAEWLLLAPYRDQLPASLFTQPFAPSKTDGGGIPRETLRK HCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHCCCHHHHCCCCCCCCCCCCCCCHHHHHH ALKLLAEAGWTLSDKGLLNADKQPLRFEILLVNPNLERILQPYIEDLRRLGINAGLRTVD HHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHH RAQYKQRLDRFDFDMILMTLQQTLSPGLEQWQYFHSSQAAINGSKNYAGIANPVVDALLN HHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHH KLLAAQTRDDQVAAARALDRVLLSQHYSIPNWYLNNHRLAYRNRFAMVTTPPYTLGLRAW HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEECCEEEEECCCHHHHHHHH WLKTLEKPR HHHHHCCCC >Mature Secondary Structure MIRPFLLTLSLALSFCANAAITESHGYAQFGVLKYPASFTHFDWVNPEAPKGGTLRMMAF CCCHHHHHHHHHHHHHCCCCEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEE GTFDTLNPYTFKGSSPVSTGNFLQYGVNELNEPLMVGTGQYDPSGDEPTSSYGLIAQSVE CCCCCCCCEEECCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHEECCC YSEDRSWVVFNLRPQARFHDGKPITAYDVAFSYRTLLKDGHPQYRTALQEVQRVDILNRH CCCCCCEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC RIRFVFKRSGNPLLILRLGELPVLPQHYWKDRDFKATTFEPPLGSGPYRITRVQPGRQLV EEEEEEEECCCEEEEEEECCCCCCCHHHCCCCCCCEEECCCCCCCCCEEEEEECCHHHHH FERVKDYWGKDLPVNRGKYNFDRVEVEFYRDSDVAFEAFKAGEFDIYIEHQAKNWANGYD HHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCEEHHHCCCCEEEEEEECCCCCCCCCC FPAVANGQVIKAQIPHRIPTQTQGLFMNTRRAAFADIRVREALGLLFNFEWTNRTLFSDA CCCCCCCCEEEEECCCCCCCCCCCEEEECCHHHHHHHHHHHHHCEEEEEEECCCEEEHHH YDRSTSYYPNSEFSATGLPTGAEWLLLAPYRDQLPASLFTQPFAPSKTDGGGIPRETLRK HCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHCCCHHHHCCCCCCCCCCCCCCCHHHHHH ALKLLAEAGWTLSDKGLLNADKQPLRFEILLVNPNLERILQPYIEDLRRLGINAGLRTVD HHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHH RAQYKQRLDRFDFDMILMTLQQTLSPGLEQWQYFHSSQAAINGSKNYAGIANPVVDALLN HHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHH KLLAAQTRDDQVAAARALDRVLLSQHYSIPNWYLNNHRLAYRNRFAMVTTPPYTLGLRAW HHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEECCEEEEECCCHHHHHHHH WLKTLEKPR HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; oligopeptides [Periplasm]; H2O [C]
Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA