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The map label for this gene is adrA [H]

Identifier: 66044929

GI number: 66044929

Start: 1892673

End: 1893737

Strand: Direct

Name: adrA [H]

Synonym: Psyr_1684

Alternate gene names: 66044929

Gene position: 1892673-1893737 (Clockwise)

Preceding gene: 66044927

Following gene: 66044930

Centisome position: 31.06

GC content: 56.62

Gene sequence:

>1065_bases
ATGAACGGTGACATGCAGACCCGGATAAAACAACTGCTCTCACCCGCCATTGCACGCGTGCAATGTATTGCCATCGTTTG
TTGGCTGGTTGTTCTGTCGGTTACGCCGTATCTGCAATTCGGTCTGCTGGAAGTGCTACTGACCCTTGGCCTGCTGGGCG
CGTGCGCCTGGCAATGCCGCGCGGTCGACTTCAGAGTCTGGCGATGTATGGGCATGGCCTTCGTGATCATTGTGGCACTG
TGCTTTTCAAGGGCGGGCCATTTACGCACCGCGACGGACATCAACTGGTCACTCTCGGTCGCCGTAATGATTATTCTGTG
TTCGACATTGTTAGTGGTGTATACCCGGGATTATCTGCTGGTGGCGGTACTCGCCTGGTGTATTCTCTCTCCCGCTCAGG
GGGTCGATACCGACAGTGTCGCGACGCTGTTCATGACACTGTTCTTTATCACGTCGGTCAGTCTGGGCAGTGTGCTGAAT
CATACTTACACGCGCACACTTCGTACGGTATTGAGTCTGGAACATCAGTTTCGCGAATTGTCGATGACCGATGACCTGAC
CGCCATATTGAATCGCCGGGCACTGATGCAGGCACTGGATAATCATGTGCTGAATAACTCCGCGGGTTATTTTCTGATGC
TCGACATTGATGACTTCAAAACCATCAATGATCAATTCGGCCACGACGCCGGTGATCAGGCGCTTCGGGTGATGGCTGGC
TGCCTGCAAAAGACCGTGGGCAGTCTCGCCTTCGGACGCATGGGCGGAGAGGAGTTCGGCGTGATCCTGCCAATGTGCAG
TGAAGACGACGCTCGGGATTATGTGCTGGACCTGTTGGAGTGCATCAGAAAATCCCTCGCTGTCAGCCCGCTGACCTGCA
GTGCCGGGCTGGCCGACATCCCTGCGGCAGCGGACAGCTCGGCAGTGCTCAAGACCGCCGACATCAATTTGTATAAGGCC
AAGCGGGGCGGCAAGGACCGGGCATTCTGGCGAGGTGCGCAGATAGGCGGCCAGCAGGCGCACGGGAGTGTGGAATGCGA
CAAAACCCGCGCCCTGACACGATAG

Upstream 100 bases:

>100_bases
AATGTCATTCAATCAGTCGGTCGACTCGTGGGCTGCTTTATATAGGTGGTCTTCATGCGGCGGATATTCGACTCGGCAAA
TCGGATGCCTGGAGTTTTCT

Downstream 100 bases:

>100_bases
GCGGCCATCGGACTTCATCGCGCCGCCCGTACCCTGTTGCAAGGTCCGCGAAACCCTTTTTAAACCCCGGTTTGCTGCTG
TCAGGCCCTTTCGCCCATAA

Product: GGDEF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MNGDMQTRIKQLLSPAIARVQCIAIVCWLVVLSVTPYLQFGLLEVLLTLGLLGACAWQCRAVDFRVWRCMGMAFVIIVAL
CFSRAGHLRTATDINWSLSVAVMIILCSTLLVVYTRDYLLVAVLAWCILSPAQGVDTDSVATLFMTLFFITSVSLGSVLN
HTYTRTLRTVLSLEHQFRELSMTDDLTAILNRRALMQALDNHVLNNSAGYFLMLDIDDFKTINDQFGHDAGDQALRVMAG
CLQKTVGSLAFGRMGGEEFGVILPMCSEDDARDYVLDLLECIRKSLAVSPLTCSAGLADIPAAADSSAVLKTADINLYKA
KRGGKDRAFWRGAQIGGQQAHGSVECDKTRALTR

Sequences:

>Translated_354_residues
MNGDMQTRIKQLLSPAIARVQCIAIVCWLVVLSVTPYLQFGLLEVLLTLGLLGACAWQCRAVDFRVWRCMGMAFVIIVAL
CFSRAGHLRTATDINWSLSVAVMIILCSTLLVVYTRDYLLVAVLAWCILSPAQGVDTDSVATLFMTLFFITSVSLGSVLN
HTYTRTLRTVLSLEHQFRELSMTDDLTAILNRRALMQALDNHVLNNSAGYFLMLDIDDFKTINDQFGHDAGDQALRVMAG
CLQKTVGSLAFGRMGGEEFGVILPMCSEDDARDYVLDLLECIRKSLAVSPLTCSAGLADIPAAADSSAVLKTADINLYKA
KRGGKDRAFWRGAQIGGQQAHGSVECDKTRALTR
>Mature_354_residues
MNGDMQTRIKQLLSPAIARVQCIAIVCWLVVLSVTPYLQFGLLEVLLTLGLLGACAWQCRAVDFRVWRCMGMAFVIIVAL
CFSRAGHLRTATDINWSLSVAVMIILCSTLLVVYTRDYLLVAVLAWCILSPAQGVDTDSVATLFMTLFFITSVSLGSVLN
HTYTRTLRTVLSLEHQFRELSMTDDLTAILNRRALMQALDNHVLNNSAGYFLMLDIDDFKTINDQFGHDAGDQALRVMAG
CLQKTVGSLAFGRMGGEEFGVILPMCSEDDARDYVLDLLECIRKSLAVSPLTCSAGLADIPAAADSSAVLKTADINLYKA
KRGGKDRAFWRGAQIGGQQAHGSVECDKTRALTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI1786584, Length=166, Percent_Identity=37.3493975903614, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787802, Length=160, Percent_Identity=36.25, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1787541, Length=164, Percent_Identity=32.9268292682927, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI87081881, Length=169, Percent_Identity=34.3195266272189, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI145693134, Length=166, Percent_Identity=31.9277108433735, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1787262, Length=165, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1788381, Length=213, Percent_Identity=27.6995305164319, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI87082007, Length=128, Percent_Identity=36.71875, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787056, Length=151, Percent_Identity=31.1258278145695, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1787816, Length=163, Percent_Identity=31.9018404907975, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR007894 [H]

Pfam domain/function: PF00990 GGDEF; PF05230 MASE2 [H]

EC number: NA

Molecular weight: Translated: 38788; Mature: 38788

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGDMQTRIKQLLSPAIARVQCIAIVCWLVVLSVTPYLQFGLLEVLLTLGLLGACAWQCR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVDFRVWRCMGMAFVIIVALCFSRAGHLRTATDINWSLSVAVMIILCSTLLVVYTRDYLL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VAVLAWCILSPAQGVDTDSVATLFMTLFFITSVSLGSVLNHTYTRTLRTVLSLEHQFREL
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SMTDDLTAILNRRALMQALDNHVLNNSAGYFLMLDIDDFKTINDQFGHDAGDQALRVMAG
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCCCCCHHHHHHHHHH
CLQKTVGSLAFGRMGGEEFGVILPMCSEDDARDYVLDLLECIRKSLAVSPLTCSAGLADI
HHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PAAADSSAVLKTADINLYKAKRGGKDRAFWRGAQIGGQQAHGSVECDKTRALTR
CCCCCCCCEEEECCCEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHCCCC
>Mature Secondary Structure
MNGDMQTRIKQLLSPAIARVQCIAIVCWLVVLSVTPYLQFGLLEVLLTLGLLGACAWQCR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVDFRVWRCMGMAFVIIVALCFSRAGHLRTATDINWSLSVAVMIILCSTLLVVYTRDYLL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VAVLAWCILSPAQGVDTDSVATLFMTLFFITSVSLGSVLNHTYTRTLRTVLSLEHQFREL
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SMTDDLTAILNRRALMQALDNHVLNNSAGYFLMLDIDDFKTINDQFGHDAGDQALRVMAG
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHCCCCCHHHHHHHHHH
CLQKTVGSLAFGRMGGEEFGVILPMCSEDDARDYVLDLLECIRKSLAVSPLTCSAGLADI
HHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PAAADSSAVLKTADINLYKAKRGGKDRAFWRGAQIGGQQAHGSVECDKTRALTR
CCCCCCCCEEEECCCEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]