| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is ilvA [H]
Identifier: 66044917
GI number: 66044917
Start: 1877991
End: 1879526
Strand: Reverse
Name: ilvA [H]
Synonym: Psyr_1672
Alternate gene names: 66044917
Gene position: 1879526-1877991 (Counterclockwise)
Preceding gene: 66044918
Following gene: 66044887
Centisome position: 30.84
GC content: 64.06
Gene sequence:
>1536_bases ATGAGCCAGGACCCGCACGCTCTGCTCAACTATTACGCGCGCAAAATCCTCACCTCGCGCGTCTACGACGTTGCCATCGA AACGCCGCTGCAAGGCGCTCGCCAGCTGTCCGAACGGCTGGGCAATCAGGTGCTGCTCAAGCGCGAAGACCTGCAGCCGG TGTTCTCGTTCAAGATTCGCGGTGCGTACAACAAGCTCGCGCAACTGCCCGCAGAGCAGACCGCACGGGGCGTGGTGACG GCCTCGGCAGGCAATCATGCCCAGGGCCTGGCGCTGGCAGCGCGTGAGCTGGGGATCAAGGCGACCATCGTCATGCCGCG CACCACTCCGGAGATCAAGGTCGAAGGCGTGCGCTCGCGGGGAGCCACCGTGGTGCTGCATGGCGATTCGTTCCCGGAAG CGCTGGCCTACTCGCTGAAGCTGGTCGACGAACAAGGTTTCGTCTACATCCATCCGTATGACGACCCCGACACCATCGCC GGGCAAGGCACTGTGGCGATGGAGATCCTTCGCCAGCAACCGGGCCAGCTGGATGCGATCTTTGTTCCGGTCGGGGGTGG CGGTCTGATTGCTGGTATCGCGGCCTACGTGAAATACCTGCGCCCGGAGATCAAGGTGATCGGCGTCGAGCCGGACGATT CCAACTGCCTGCAGGCGGCGATGGCCGCCGGGGAGCGCGTGGTGTTGAGCCAGGTCGGGCTGTTTGCCGATGGCGTGGCG GTCGCGCAGATCGGCCATCACACCTTTGAAGTGTGCCGCCATTATGTCGATGAAGTGATCACCGTCAGCACGGATGAGAT CTGTGCGGCGATCAAGGACATCTACGATGACACCCGCTCGATCACCGAGCCCTCCGGCGCGTTGGGCGTGGCCGGGATCA AGAAGTATGTCGAGCAGCGCGGCGTCAGCGGCCAGACGCTGGTGGCGATTGATTCAGGGGCCAACGTCAACTTCGATCGC TTGCGGCACGTGGCCGAGCGCGCCGAACTGGGCGAAGGCCGCGAGGCGATCATTGCCGTGACCATCCCCGAGCAACCGGG CAGCTTCAAGGCGTTCTGCGAGGCCATCGGCAAGCGGCAGATCACCGAATTCAACTACCGCTATCACACCGACCGCGAGG CGCACATCTTCGTCGGCGTGCAGACCCATCCCGAGAACGACCCACGCAGCGCCCTGATCGCCAGCCTGACCGGGCAAGGC TTCCCGGTGCTGGACCTGACAGACAACGAACTGGCCAAACTGCACATCCGCCACATGGTCGGCGGGCATGCCGAGCGGGT CGACGATGAAGTGGTGCTGCGCTTCGAGTTCCCGGAGCGACCGGGCGCGCTGTTCAACTTCCTCAACCGCCTGGGCGGGC GCTGGACCATCTCCATGTTCCACTACCGCAACCACGGCGCAGCCGATGGCCGAGTGGTTGCCGGGCTGGTGGTGCCGGAG GAAGAGCGGCATCTGGTCGGTGCTGCGCTGGATGAGATTGGTTACCGGTACTGGGATGAAAGCGAGAACCCGGCTTACCG GTTGTTTCTGGGCTGA
Upstream 100 bases:
>100_bases TCCCTCGCTCTATCGCCCTTCTCGCTTCTCTGGACCTGATTATCGGTCTGCCGCGCGCGTTCACCGAGTATCCAGGCACG ACGTATGAAGAGACGATGCG
Downstream 100 bases:
>100_bases GGCCGAGGATATCTCTCGTTCCTCACGCTCCGCGTCACAAGAGGACGCAGAGCGTCCAGACCGGCATACCCACGCGGAGC ATGGGCACGATGGTGTTATC
Product: threonine dehydratase
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 511; Mature: 510
Protein sequence:
>511_residues MSQDPHALLNYYARKILTSRVYDVAIETPLQGARQLSERLGNQVLLKREDLQPVFSFKIRGAYNKLAQLPAEQTARGVVT ASAGNHAQGLALAARELGIKATIVMPRTTPEIKVEGVRSRGATVVLHGDSFPEALAYSLKLVDEQGFVYIHPYDDPDTIA GQGTVAMEILRQQPGQLDAIFVPVGGGGLIAGIAAYVKYLRPEIKVIGVEPDDSNCLQAAMAAGERVVLSQVGLFADGVA VAQIGHHTFEVCRHYVDEVITVSTDEICAAIKDIYDDTRSITEPSGALGVAGIKKYVEQRGVSGQTLVAIDSGANVNFDR LRHVAERAELGEGREAIIAVTIPEQPGSFKAFCEAIGKRQITEFNYRYHTDREAHIFVGVQTHPENDPRSALIASLTGQG FPVLDLTDNELAKLHIRHMVGGHAERVDDEVVLRFEFPERPGALFNFLNRLGGRWTISMFHYRNHGAADGRVVAGLVVPE EERHLVGAALDEIGYRYWDESENPAYRLFLG
Sequences:
>Translated_511_residues MSQDPHALLNYYARKILTSRVYDVAIETPLQGARQLSERLGNQVLLKREDLQPVFSFKIRGAYNKLAQLPAEQTARGVVT ASAGNHAQGLALAARELGIKATIVMPRTTPEIKVEGVRSRGATVVLHGDSFPEALAYSLKLVDEQGFVYIHPYDDPDTIA GQGTVAMEILRQQPGQLDAIFVPVGGGGLIAGIAAYVKYLRPEIKVIGVEPDDSNCLQAAMAAGERVVLSQVGLFADGVA VAQIGHHTFEVCRHYVDEVITVSTDEICAAIKDIYDDTRSITEPSGALGVAGIKKYVEQRGVSGQTLVAIDSGANVNFDR LRHVAERAELGEGREAIIAVTIPEQPGSFKAFCEAIGKRQITEFNYRYHTDREAHIFVGVQTHPENDPRSALIASLTGQG FPVLDLTDNELAKLHIRHMVGGHAERVDDEVVLRFEFPERPGALFNFLNRLGGRWTISMFHYRNHGAADGRVVAGLVVPE EERHLVGAALDEIGYRYWDESENPAYRLFLG >Mature_510_residues SQDPHALLNYYARKILTSRVYDVAIETPLQGARQLSERLGNQVLLKREDLQPVFSFKIRGAYNKLAQLPAEQTARGVVTA SAGNHAQGLALAARELGIKATIVMPRTTPEIKVEGVRSRGATVVLHGDSFPEALAYSLKLVDEQGFVYIHPYDDPDTIAG QGTVAMEILRQQPGQLDAIFVPVGGGGLIAGIAAYVKYLRPEIKVIGVEPDDSNCLQAAMAAGERVVLSQVGLFADGVAV AQIGHHTFEVCRHYVDEVITVSTDEICAAIKDIYDDTRSITEPSGALGVAGIKKYVEQRGVSGQTLVAIDSGANVNFDRL RHVAERAELGEGREAIIAVTIPEQPGSFKAFCEAIGKRQITEFNYRYHTDREAHIFVGVQTHPENDPRSALIASLTGQGF PVLDLTDNELAKLHIRHMVGGHAERVDDEVVLRFEFPERPGALFNFLNRLGGRWTISMFHYRNHGAADGRVVAGLVVPEE ERHLVGAALDEIGYRYWDESENPAYRLFLG
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=307, Percent_Identity=34.8534201954397, Blast_Score=174, Evalue=2e-43, Organism=Homo sapiens, GI33469958, Length=314, Percent_Identity=29.2993630573248, Blast_Score=111, Evalue=1e-24, Organism=Homo sapiens, GI19923959, Length=319, Percent_Identity=29.153605015674, Blast_Score=96, Evalue=1e-19, Organism=Homo sapiens, GI295821202, Length=144, Percent_Identity=34.0277777777778, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI295821200, Length=144, Percent_Identity=34.0277777777778, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI4557415, Length=144, Percent_Identity=34.0277777777778, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI1790207, Length=499, Percent_Identity=53.3066132264529, Blast_Score=509, Evalue=1e-145, Organism=Escherichia coli, GI1789505, Length=313, Percent_Identity=38.3386581469649, Blast_Score=191, Evalue=1e-49, Organism=Escherichia coli, GI1789235, Length=301, Percent_Identity=22.9235880398671, Blast_Score=62, Evalue=9e-11, Organism=Caenorhabditis elegans, GI71991565, Length=332, Percent_Identity=36.7469879518072, Blast_Score=177, Evalue=1e-44, Organism=Caenorhabditis elegans, GI17508781, Length=264, Percent_Identity=35.6060606060606, Blast_Score=157, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17537387, Length=343, Percent_Identity=33.2361516034985, Blast_Score=148, Evalue=6e-36, Organism=Saccharomyces cerevisiae, GI6320930, Length=513, Percent_Identity=50.8771929824561, Blast_Score=474, Evalue=1e-134, Organism=Saccharomyces cerevisiae, GI6322631, Length=303, Percent_Identity=37.953795379538, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6319788, Length=244, Percent_Identity=28.2786885245902, Blast_Score=97, Evalue=6e-21, Organism=Drosophila melanogaster, GI21355833, Length=318, Percent_Identity=34.2767295597484, Blast_Score=149, Evalue=6e-36, Organism=Drosophila melanogaster, GI24645328, Length=250, Percent_Identity=31.6, Blast_Score=100, Evalue=3e-21,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR005787 - InterPro: IPR001721 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 55954; Mature: 55823
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQDPHALLNYYARKILTSRVYDVAIETPLQGARQLSERLGNQVLLKREDLQPVFSFKIR CCCCHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEEC GAYNKLAQLPAEQTARGVVTASAGNHAQGLALAARELGIKATIVMPRTTPEIKVEGVRSR CHHHHHHHCCHHHHCCEEEEECCCCCCCHHHHHHHHCCCEEEEEECCCCCCEEEEEECCC GATVVLHGDSFPEALAYSLKLVDEQGFVYIHPYDDPDTIAGQGTVAMEILRQQPGQLDAI CCEEEEECCCCHHHHHHHHEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEE FVPVGGGGLIAGIAAYVKYLRPEIKVIGVEPDDSNCLQAAMAAGERVVLSQVGLFADGVA EEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCEEEHHHHCHHHCCHH VAQIGHHTFEVCRHYVDEVITVSTDEICAAIKDIYDDTRSITEPSGALGVAGIKKYVEQR HHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHC GVSGQTLVAIDSGANVNFDRLRHVAERAELGEGREAIIAVTIPEQPGSFKAFCEAIGKRQ CCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHCCCC ITEFNYRYHTDREAHIFVGVQTHPENDPRSALIASLTGQGFPVLDLTDNELAKLHIRHMV EEEECCEEECCCCEEEEEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH GGHAERVDDEVVLRFEFPERPGALFNFLNRLGGRWTISMFHYRNHGAADGRVVAGLVVPE CCCHHCCCCEEEEEEECCCCCCHHHHHHHHCCCEEEEEEEEECCCCCCCCEEEEEEECCC EERHLVGAALDEIGYRYWDESENPAYRLFLG HHHHHHHHHHHHCCCEECCCCCCCEEEEEEC >Mature Secondary Structure SQDPHALLNYYARKILTSRVYDVAIETPLQGARQLSERLGNQVLLKREDLQPVFSFKIR CCCHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCEEEEECCCCCCEEEEEEC GAYNKLAQLPAEQTARGVVTASAGNHAQGLALAARELGIKATIVMPRTTPEIKVEGVRSR CHHHHHHHCCHHHHCCEEEEECCCCCCCHHHHHHHHCCCEEEEEECCCCCCEEEEEECCC GATVVLHGDSFPEALAYSLKLVDEQGFVYIHPYDDPDTIAGQGTVAMEILRQQPGQLDAI CCEEEEECCCCHHHHHHHHEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEE FVPVGGGGLIAGIAAYVKYLRPEIKVIGVEPDDSNCLQAAMAAGERVVLSQVGLFADGVA EEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHCCCEEEHHHHCHHHCCHH VAQIGHHTFEVCRHYVDEVITVSTDEICAAIKDIYDDTRSITEPSGALGVAGIKKYVEQR HHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHC GVSGQTLVAIDSGANVNFDRLRHVAERAELGEGREAIIAVTIPEQPGSFKAFCEAIGKRQ CCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHCCCC ITEFNYRYHTDREAHIFVGVQTHPENDPRSALIASLTGQGFPVLDLTDNELAKLHIRHMV EEEECCEEECCCCEEEEEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH GGHAERVDDEVVLRFEFPERPGALFNFLNRLGGRWTISMFHYRNHGAADGRVVAGLVVPE CCCHHCCCCEEEEEEECCCCCCHHHHHHHHCCCEEEEEEEEECCCCCCCCEEEEEEECCC EERHLVGAALDEIGYRYWDESENPAYRLFLG HHHHHHHHHHHHCCCEECCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA