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The map label for this gene is oruR [H]

Identifier: 66044918

GI number: 66044918

Start: 1880084

End: 1881124

Strand: Reverse

Name: oruR [H]

Synonym: Psyr_1673

Alternate gene names: 66044918

Gene position: 1881124-1880084 (Counterclockwise)

Preceding gene: 66044919

Following gene: 66044917

Centisome position: 30.87

GC content: 61.58

Gene sequence:

>1041_bases
ATGCCGACCCTGACCCTGCGCCTGGGTGATCTGTCGGTGGGTTTCATCCAGAGCCTGAGCGATGCGGTCAACAGTTTCGA
CAGGAACCCTGACGCGCTGCTGGAGCAGTACGGTCTTGACCCGATTCGCCTGAGCCAGGCGCGGGCGCGGCTGTCGATCC
CGCGCTACATGCGCCTGGGACACGCTGCCATCCAGCTGACCGGCCAGCCCGGGCTGGGCTTGCGCATGGGCCAGCTGAGT
CGTTTCGCGCAGGCCGGTCTGGCCGGTATCACCGCGGCCCAGGCACCCAACGTGCGCGAGGCGGCGCGCACGCTGATTCG
CTTTGAACCCTTGTACGGTTCCAATTATCGCGGCCAGTCGAGTTTCCACGAGGATGCCGACGGCGCCTGGATGCGCTTCT
ATTCAATCAGCCCCTATAACGCTTACAACAGGTTTGTGGTGGACTCGATTTTAGCTGGCTGGCTGGCTCAGCTTTCCACG
CTGGCAGGTACAGAGCTGCGCGCACAACGCGTCGAGATCGAATTCGAAGCGCCTGACTATGCCGCGCAATACGCCGTACT
GAGTGATAACCCGATGGTATTTGGCGCGGCGACCAACCAACTGCATCTGGACCAGACCAGCCTGGCATTGCGCAACCCCG
ACCATTGCCCAAGTACCTGGCGGCACCTGTTGCAGCTGTGCGAAAGCGAACTGGAACAACAGACCCGCACCCGCAGCCTG
CGTGAACGCATCATTCAATTGCTGGGGCCGTTATTGAACGGCGGAAGTGAACCGGATCTGGAGGAAGTGGCAGCAAGGCT
CAAACTGCCGACCTGGACGCTGCGTCGCAAGCTGGCTGAGGAAGGTACATGCTTTCGCGCAGTGCTCAATGACACGCGGC
GCGACCTGGCAATGACGTACATTCGCGACACTGAACTGGCGTTCGGGGAGATCGCCTACCTGCTGGGATTCGCTTCTGCC
GAAGCCTTTCAACGCGCCTTCAAACGCTGGAACGGGCAGACTCCGGGAGAGTTCCGCCGCAGCCAGCGTCAAAGCGCATG
A

Upstream 100 bases:

>100_bases
GGCAAAGTTTTGCCAGCCACGCTGGGCAGACGATCGCCGAGCCGCAGCAGGAAAATGCTGCCGCTGGCGGTGCGCGCCTG
ATCAACCTCTGGCTTTGACG

Downstream 100 bases:

>100_bases
AGCCGTTCACAGTTCGGTAGCGTCGTCGGCAGGCTCTACCGGGTCCAGTTCCGATGCACGGTATTCGAGTAGTTCTTCCT
GGTATTCGTCCATTTCTTCG

Product: helix-turn-helix, AraC type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MPTLTLRLGDLSVGFIQSLSDAVNSFDRNPDALLEQYGLDPIRLSQARARLSIPRYMRLGHAAIQLTGQPGLGLRMGQLS
RFAQAGLAGITAAQAPNVREAARTLIRFEPLYGSNYRGQSSFHEDADGAWMRFYSISPYNAYNRFVVDSILAGWLAQLST
LAGTELRAQRVEIEFEAPDYAAQYAVLSDNPMVFGAATNQLHLDQTSLALRNPDHCPSTWRHLLQLCESELEQQTRTRSL
RERIIQLLGPLLNGGSEPDLEEVAARLKLPTWTLRRKLAEEGTCFRAVLNDTRRDLAMTYIRDTELAFGEIAYLLGFASA
EAFQRAFKRWNGQTPGEFRRSQRQSA

Sequences:

>Translated_346_residues
MPTLTLRLGDLSVGFIQSLSDAVNSFDRNPDALLEQYGLDPIRLSQARARLSIPRYMRLGHAAIQLTGQPGLGLRMGQLS
RFAQAGLAGITAAQAPNVREAARTLIRFEPLYGSNYRGQSSFHEDADGAWMRFYSISPYNAYNRFVVDSILAGWLAQLST
LAGTELRAQRVEIEFEAPDYAAQYAVLSDNPMVFGAATNQLHLDQTSLALRNPDHCPSTWRHLLQLCESELEQQTRTRSL
RERIIQLLGPLLNGGSEPDLEEVAARLKLPTWTLRRKLAEEGTCFRAVLNDTRRDLAMTYIRDTELAFGEIAYLLGFASA
EAFQRAFKRWNGQTPGEFRRSQRQSA
>Mature_345_residues
PTLTLRLGDLSVGFIQSLSDAVNSFDRNPDALLEQYGLDPIRLSQARARLSIPRYMRLGHAAIQLTGQPGLGLRMGQLSR
FAQAGLAGITAAQAPNVREAARTLIRFEPLYGSNYRGQSSFHEDADGAWMRFYSISPYNAYNRFVVDSILAGWLAQLSTL
AGTELRAQRVEIEFEAPDYAAQYAVLSDNPMVFGAATNQLHLDQTSLALRNPDHCPSTWRHLLQLCESELEQQTRTRSLR
ERIIQLLGPLLNGGSEPDLEEVAARLKLPTWTLRRKLAEEGTCFRAVLNDTRRDLAMTYIRDTELAFGEIAYLLGFASAE
AFQRAFKRWNGQTPGEFRRSQRQSA

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 38797; Mature: 38666

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTLTLRLGDLSVGFIQSLSDAVNSFDRNPDALLEQYGLDPIRLSQARARLSIPRYMRLG
CCEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHC
HAAIQLTGQPGLGLRMGQLSRFAQAGLAGITAAQAPNVREAARTLIRFEPLYGSNYRGQS
CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCC
SFHEDADGAWMRFYSISPYNAYNRFVVDSILAGWLAQLSTLAGTELRAQRVEIEFEAPDY
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEEEECCCCH
AAQYAVLSDNPMVFGAATNQLHLDQTSLALRNPDHCPSTWRHLLQLCESELEQQTRTRSL
HHEEEEECCCCEEEEECCCEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RERIIQLLGPLLNGGSEPDLEEVAARLKLPTWTLRRKLAEEGTCFRAVLNDTRRDLAMTY
HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
IRDTELAFGEIAYLLGFASAEAFQRAFKRWNGQTPGEFRRSQRQSA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCC
>Mature Secondary Structure 
PTLTLRLGDLSVGFIQSLSDAVNSFDRNPDALLEQYGLDPIRLSQARARLSIPRYMRLG
CEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHC
HAAIQLTGQPGLGLRMGQLSRFAQAGLAGITAAQAPNVREAARTLIRFEPLYGSNYRGQS
CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCC
SFHEDADGAWMRFYSISPYNAYNRFVVDSILAGWLAQLSTLAGTELRAQRVEIEFEAPDY
CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEEEEECCCCH
AAQYAVLSDNPMVFGAATNQLHLDQTSLALRNPDHCPSTWRHLLQLCESELEQQTRTRSL
HHEEEEECCCCEEEEECCCEEECCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
RERIIQLLGPLLNGGSEPDLEEVAARLKLPTWTLRRKLAEEGTCFRAVLNDTRRDLAMTY
HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
IRDTELAFGEIAYLLGFASAEAFQRAFKRWNGQTPGEFRRSQRQSA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]