| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044904
Identifier: 66044904
GI number: 66044904
Start: 1862344
End: 1862904
Strand: Direct
Name: 66044904
Synonym: Psyr_1659
Alternate gene names: NA
Gene position: 1862344-1862904 (Clockwise)
Preceding gene: 66044903
Following gene: 66044905
Centisome position: 30.56
GC content: 58.82
Gene sequence:
>561_bases GTGACCGATTCAAACAAGGCGGGTGATCTGTTCGCGCAGATCCCCAAAACCAAAGGGTTGCCGCCTGTTCATTTGTGGAA TCCGGATTTCTGCGGCGATATCGACATGCGTATCGCCCGCGACGGTACCTGGTATTACCTGGGCACGCCGATCGGCCGCA AACCGATGGTTCGGTTGTTCTCGACCATCATGCGCCGTGACGGCGATGACTATTTCCTGATCACTCCCGTCGAGAAGGTC GGCATCACCGTTGATGACGCGCCTTTTGTCGCCGTCAGCCTTGAGGTGCTGGGGGAGGGCGAGGGCCAGGTGTTGCGCTT TCTGACCAATGTAGAGGATCAGAGCGAAGCGGGACCGGAACACCCTTTGCGGGTTGTCACCGACCCTGATACCCAGGAAC CGGCGCCGTACATTCACGTGCGGAGCAATCTGGAAGCGCTGATTCACCGCAATGTTTTCTATCAGTTGGTCGAGCTGGCC GTTTCCCGCGATATGGACGGACAGCGCTGGCTGGGCGTCTGGAGCCATGGCGTGTTCTTCCCGATAGGGCTCGAGCCTTG A
Upstream 100 bases:
>100_bases AAAAGCCCCGAGGATTTGCTGGGTCCGCCGCTTGAGGACTACGCTCGTACCTTATTGGGTGTCGAACGCTAGAGCCTAAA GCTCGCATCAGGAGAATGGA
Downstream 100 bases:
>100_bases AATACACACCTGATTGCCGGCTTGAATTGCCTGTCGGCAATGCGGCGGTTAAAGTGCCGCTCCCTGATTTTCCTGAGGTT TTTGCATGAGCCAGTCCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MTDSNKAGDLFAQIPKTKGLPPVHLWNPDFCGDIDMRIARDGTWYYLGTPIGRKPMVRLFSTIMRRDGDDYFLITPVEKV GITVDDAPFVAVSLEVLGEGEGQVLRFLTNVEDQSEAGPEHPLRVVTDPDTQEPAPYIHVRSNLEALIHRNVFYQLVELA VSRDMDGQRWLGVWSHGVFFPIGLEP
Sequences:
>Translated_186_residues MTDSNKAGDLFAQIPKTKGLPPVHLWNPDFCGDIDMRIARDGTWYYLGTPIGRKPMVRLFSTIMRRDGDDYFLITPVEKV GITVDDAPFVAVSLEVLGEGEGQVLRFLTNVEDQSEAGPEHPLRVVTDPDTQEPAPYIHVRSNLEALIHRNVFYQLVELA VSRDMDGQRWLGVWSHGVFFPIGLEP >Mature_185_residues TDSNKAGDLFAQIPKTKGLPPVHLWNPDFCGDIDMRIARDGTWYYLGTPIGRKPMVRLFSTIMRRDGDDYFLITPVEKVG ITVDDAPFVAVSLEVLGEGEGQVLRFLTNVEDQSEAGPEHPLRVVTDPDTQEPAPYIHVRSNLEALIHRNVFYQLVELAV SRDMDGQRWLGVWSHGVFFPIGLEP
Specific function: Unknown
COG id: COG3816
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20934; Mature: 20803
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSNKAGDLFAQIPKTKGLPPVHLWNPDFCGDIDMRIARDGTWYYLGTPIGRKPMVRLF CCCCCCCCHHHEECCCCCCCCEEEECCCCCCCCCCEEEECCCCEEEECCCCCCCHHHHHH STIMRRDGDDYFLITPVEKVGITVDDAPFVAVSLEVLGEGEGQVLRFLTNVEDQSEAGPE HHHHHCCCCCEEEEECHHHHCEEECCCCEEEEEEEEECCCCCHHHHHHHCCCCCCCCCCC HPLRVVTDPDTQEPAPYIHVRSNLEALIHRNVFYQLVELAVSRDMDGQRWLGVWSHGVFF CCEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEE PIGLEP EECCCC >Mature Secondary Structure TDSNKAGDLFAQIPKTKGLPPVHLWNPDFCGDIDMRIARDGTWYYLGTPIGRKPMVRLF CCCCCCCHHHEECCCCCCCCEEEECCCCCCCCCCEEEECCCCEEEECCCCCCCHHHHHH STIMRRDGDDYFLITPVEKVGITVDDAPFVAVSLEVLGEGEGQVLRFLTNVEDQSEAGPE HHHHHCCCCCEEEEECHHHHCEEECCCCEEEEEEEEECCCCCHHHHHHHCCCCCCCCCCC HPLRVVTDPDTQEPAPYIHVRSNLEALIHRNVFYQLVELAVSRDMDGQRWLGVWSHGVFF CCEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEE PIGLEP EECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA