| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is usg [H]
Identifier: 66044905
GI number: 66044905
Start: 1862990
End: 1864003
Strand: Direct
Name: usg [H]
Synonym: Psyr_1660
Alternate gene names: 66044905
Gene position: 1862990-1864003 (Clockwise)
Preceding gene: 66044904
Following gene: 66044906
Centisome position: 30.57
GC content: 60.36
Gene sequence:
>1014_bases ATGAGCCAGTCCTTTGATATCGCCGTAGTCGGCGCAACCGGTACTGTCGGCGAAACCGTTGTGCAGGTTCTGGAGGAGCG CAATTTTCCGGTGGGCAATCTGTACCTGTTGGCCAGCATCGAATCCGCAGGCCACTCGGTGCCGTTTCGAGGCAAGAATG TGCGCGTACGCGAAGTCGACGAGTTCGACTTCAGTAAGGTGCGCATGGCGTTTTTCGCTGCGGGACCTGCGGTCAGTCGC AGTCACGCCGAAAAGGCGGTAGCTGCGGGGTCCACGGTCATCGACCTGTCGGGGACATTTACCTCAACCCAGGCGCCGAA TGTGGTGCCGGAAATAAATGCTACGCTTTTGCACAGCCGTGGCGTCGTTCCTTGTCTGGTTGCCAGCCCCAGTGCTTCTG CCACTGCGGTTGCCCTGGCTCTGGCGCCGTTGCGCGGCCTGATCGATATCCAGTCGGTGACGGTAACGGCGTGTCTGGCG GTATCGGCACTGGGGCGTGAAGGCGTCAGTGAGCTGGCACGTCAGACCACCGAGCTGTTGAATGTCCGTCCGCTGGAAAC CCGGTTTTTTGATCGCCAGATGGCGTTCAACCTGCTGGCTCAAGTGGGTACACCGGACGCGTCGGGGCACCTGCCGCTGG AAAGGCGTCTGGTCGAAGAATTGCGCGAACTGCTGGCGCTGCCATCGCTCAAAGTGTCTGCGACCTGCATTCAGGTACCA GTGTTCTTTGGTGACAGCTTCACTGTAGCGCTGCGCACGGCCGGAGCGGTCGACGTGGCGGCGGTCAACGCTGCACTCGA GTCTGCAGACGGGGTCGAACTGGTCGATGCGGGGGATTACCCTACGCCGGTGGGCGATGCGGTGGGCCAGGACGTGGTTT ATGTGGGACGCGTCAGGACGGGAACCGACGATTCCGAGCAGCTCAATCTGTGGCTGACCTCGGATAATGTGCGCAAAGGC GCTGCGCTCAACGCTGTGCAGGTTGGCGAATTGTTGATAAAAGACTATGTGTAA
Upstream 100 bases:
>100_bases GGGCTCGAGCCTTGAAATACACACCTGATTGCCGGCTTGAATTGCCTGTCGGCAATGCGGCGGTTAAAGTGCCGCTCCCT GATTTTCCTGAGGTTTTTGC
Downstream 100 bases:
>100_bases AAGATACTTGGCAACAATTTGAATAATTGTTTTAGCGGCGATACGCCTTACACCCAAATGCAGGACTACCTCCCCGGATC TCGGGGAATCTTTAAACAAG
Product: aspartate-semialdehyde dehydrogenase
Products: L-4-aspartyl phosphate; NADPH; H+
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MSQSFDIAVVGATGTVGETVVQVLEERNFPVGNLYLLASIESAGHSVPFRGKNVRVREVDEFDFSKVRMAFFAAGPAVSR SHAEKAVAAGSTVIDLSGTFTSTQAPNVVPEINATLLHSRGVVPCLVASPSASATAVALALAPLRGLIDIQSVTVTACLA VSALGREGVSELARQTTELLNVRPLETRFFDRQMAFNLLAQVGTPDASGHLPLERRLVEELRELLALPSLKVSATCIQVP VFFGDSFTVALRTAGAVDVAAVNAALESADGVELVDAGDYPTPVGDAVGQDVVYVGRVRTGTDDSEQLNLWLTSDNVRKG AALNAVQVGELLIKDYV
Sequences:
>Translated_337_residues MSQSFDIAVVGATGTVGETVVQVLEERNFPVGNLYLLASIESAGHSVPFRGKNVRVREVDEFDFSKVRMAFFAAGPAVSR SHAEKAVAAGSTVIDLSGTFTSTQAPNVVPEINATLLHSRGVVPCLVASPSASATAVALALAPLRGLIDIQSVTVTACLA VSALGREGVSELARQTTELLNVRPLETRFFDRQMAFNLLAQVGTPDASGHLPLERRLVEELRELLALPSLKVSATCIQVP VFFGDSFTVALRTAGAVDVAAVNAALESADGVELVDAGDYPTPVGDAVGQDVVYVGRVRTGTDDSEQLNLWLTSDNVRKG AALNAVQVGELLIKDYV >Mature_336_residues SQSFDIAVVGATGTVGETVVQVLEERNFPVGNLYLLASIESAGHSVPFRGKNVRVREVDEFDFSKVRMAFFAAGPAVSRS HAEKAVAAGSTVIDLSGTFTSTQAPNVVPEINATLLHSRGVVPCLVASPSASATAVALALAPLRGLIDIQSVTVTACLAV SALGREGVSELARQTTELLNVRPLETRFFDRQMAFNLLAQVGTPDASGHLPLERRLVEELRELLALPSLKVSATCIQVPV FFGDSFTVALRTAGAVDVAAVNAALESADGVELVDAGDYPTPVGDAVGQDVVYVGRVRTGTDDSEQLNLWLTSDNVRKGA ALNAVQVGELLIKDYV
Specific function: Unknown
COG id: COG0136
COG function: function code E; Aspartate-semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate-semialdehyde dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788658, Length=342, Percent_Identity=38.3040935672515, Blast_Score=221, Evalue=5e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012080 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 [H]
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC [H]
EC number: 1.2.1.11
Molecular weight: Translated: 35473; Mature: 35341
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSFDIAVVGATGTVGETVVQVLEERNFPVGNLYLLASIESAGHSVPFRGKNVRVREVD CCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECC EFDFSKVRMAFFAAGPAVSRSHAEKAVAAGSTVIDLSGTFTSTQAPNVVPEINATLLHSR CCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEECC GVVPCLVASPSASATAVALALAPLRGLIDIQSVTVTACLAVSALGREGVSELARQTTELL CCCEEEEECCCCCHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH NVRPLETRFFDRQMAFNLLAQVGTPDASGHLPLERRLVEELRELLALPSLKVSATCIQVP CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEE VFFGDSFTVALRTAGAVDVAAVNAALESADGVELVDAGDYPTPVGDAVGQDVVYVGRVRT EEECCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCEEEEEEEEC GTDDSEQLNLWLTSDNVRKGAALNAVQVGELLIKDYV CCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure SQSFDIAVVGATGTVGETVVQVLEERNFPVGNLYLLASIESAGHSVPFRGKNVRVREVD CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECC EFDFSKVRMAFFAAGPAVSRSHAEKAVAAGSTVIDLSGTFTSTQAPNVVPEINATLLHSR CCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEEECC GVVPCLVASPSASATAVALALAPLRGLIDIQSVTVTACLAVSALGREGVSELARQTTELL CCCEEEEECCCCCHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH NVRPLETRFFDRQMAFNLLAQVGTPDASGHLPLERRLVEELRELLALPSLKVSATCIQVP CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEE VFFGDSFTVALRTAGAVDVAAVNAALESADGVELVDAGDYPTPVGDAVGQDVVYVGRVRT EEECCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCEEEEEEEEC GTDDSEQLNLWLTSDNVRKGAALNAVQVGELLIKDYV CCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate 4-semialdehyde; phosphate; NADP+
Specific reaction: L-aspartate 4-semialdehyde + phosphate + NADP+ = L-4-aspartyl phosphate + NADPH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9108283 [H]