| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is yliJ [H]
Identifier: 66044874
GI number: 66044874
Start: 1833054
End: 1833677
Strand: Direct
Name: yliJ [H]
Synonym: Psyr_1629
Alternate gene names: 66044874
Gene position: 1833054-1833677 (Clockwise)
Preceding gene: 66044870
Following gene: 66044875
Centisome position: 30.08
GC content: 62.18
Gene sequence:
>624_bases ATGCTCAAGATCTGGGGACGGAAGAATTCCAGCAATGTGCGCAAGGCACTCTGGATTGCCGAGGAAGTGGGCGTACCCTA CGAGACGCAGGACGCTGGTGGTGCATTCGGCCTGGTCAACGAAGCGGCCTATCGCGCGAAAAACCCTAACGGCCGGATTC CGATGATTGAAGACGGCGACTTCGTGATGTGGGAGTCCAACGCCATCGTGCGCTATCTGGCCGCCCGGCATGCCCCCGAT TCTGATTTATACCCCGCAGACCTGCAGGCCCGCGCCAATGCAGACAAGTGGATGGACTGGACCACCTCGACCATCGCCGC GCCGTTCAGCCCGGTGTTCTGGGGCGTGGTGCGCACGCCGGCCGAGAAACAGGACTGGCCGGCCATCAAGCAAGGCATCA AGACGCTGCACAGCCTGCTGCTGGTGGCCGACGAGGCGCTGTCGCGACAGCCCTGGCTGTCTGGCGATGCTTTCGGCATG GGCGATATTCCCCTGGGATGCTTCGCCTACGGCTGGTTTGAAATGCCGATTGAACGTCCGCCGCTGCCTCACCTCCAAGC CTGGTATGAGCGTCTCAAGACGCGCCCGGCTTATCGCAAGGCGGTCATGACCCCGTTGACCTGA
Upstream 100 bases:
>100_bases TGAGGCGACATCGATAGTGACCCCTGGTTGACGAGGAAGTTGCCGCCGCTTAGGGGTAGACTGTGAGCCTTTATTTATCA GCGACTGCGAGGGGAACGCA
Downstream 100 bases:
>100_bases GCATGTGATGTGAACAGGTGAAAGGGCTGATCGGGCGCATGTCCGGCGCTCGATATTTACTATTAACAGATGTGTCTGTA CTTGAACGACGCAGCCGAGC
Product: glutathione S-transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MLKIWGRKNSSNVRKALWIAEEVGVPYETQDAGGAFGLVNEAAYRAKNPNGRIPMIEDGDFVMWESNAIVRYLAARHAPD SDLYPADLQARANADKWMDWTTSTIAAPFSPVFWGVVRTPAEKQDWPAIKQGIKTLHSLLLVADEALSRQPWLSGDAFGM GDIPLGCFAYGWFEMPIERPPLPHLQAWYERLKTRPAYRKAVMTPLT
Sequences:
>Translated_207_residues MLKIWGRKNSSNVRKALWIAEEVGVPYETQDAGGAFGLVNEAAYRAKNPNGRIPMIEDGDFVMWESNAIVRYLAARHAPD SDLYPADLQARANADKWMDWTTSTIAAPFSPVFWGVVRTPAEKQDWPAIKQGIKTLHSLLLVADEALSRQPWLSGDAFGM GDIPLGCFAYGWFEMPIERPPLPHLQAWYERLKTRPAYRKAVMTPLT >Mature_207_residues MLKIWGRKNSSNVRKALWIAEEVGVPYETQDAGGAFGLVNEAAYRAKNPNGRIPMIEDGDFVMWESNAIVRYLAARHAPD SDLYPADLQARANADKWMDWTTSTIAAPFSPVFWGVVRTPAEKQDWPAIKQGIKTLHSLLLVADEALSRQPWLSGDAFGM GDIPLGCFAYGWFEMPIERPPLPHLQAWYERLKTRPAYRKAVMTPLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI4504187, Length=163, Percent_Identity=28.2208588957055, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI124249394, Length=163, Percent_Identity=28.2208588957055, Blast_Score=72, Evalue=5e-13, Organism=Escherichia coli, GI87081789, Length=209, Percent_Identity=43.0622009569378, Blast_Score=171, Evalue=5e-44, Organism=Drosophila melanogaster, GI19922526, Length=208, Percent_Identity=29.3269230769231, Blast_Score=90, Evalue=9e-19, Organism=Drosophila melanogaster, GI19922528, Length=205, Percent_Identity=27.3170731707317, Blast_Score=77, Evalue=6e-15, Organism=Drosophila melanogaster, GI24654979, Length=210, Percent_Identity=25.2380952380952, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24654983, Length=209, Percent_Identity=27.7511961722488, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI24654965, Length=201, Percent_Identity=23.8805970149254, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI17864596, Length=190, Percent_Identity=22.6315789473684, Blast_Score=71, Evalue=4e-13, Organism=Drosophila melanogaster, GI24654975, Length=159, Percent_Identity=28.9308176100629, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI21686985, Length=202, Percent_Identity=31.1881188118812, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI20130115, Length=206, Percent_Identity=24.7572815533981, Blast_Score=68, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 23304; Mature: 23304
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKIWGRKNSSNVRKALWIAEEVGVPYETQDAGGAFGLVNEAAYRAKNPNGRIPMIEDGD CEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEECCC FVMWESNAIVRYLAARHAPDSDLYPADLQARANADKWMDWTTSTIAAPFSPVFWGVVRTP EEEEECCHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHCCCHHHHHCCCCHHHHHHHCCC AEKQDWPAIKQGIKTLHSLLLVADEALSRQPWLSGDAFGMGDIPLGCFAYGWFEMPIERP CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCC PLPHLQAWYERLKTRPAYRKAVMTPLT CCHHHHHHHHHHHCCHHHHHHHCCCCC >Mature Secondary Structure MLKIWGRKNSSNVRKALWIAEEVGVPYETQDAGGAFGLVNEAAYRAKNPNGRIPMIEDGD CEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEECCC FVMWESNAIVRYLAARHAPDSDLYPADLQARANADKWMDWTTSTIAAPFSPVFWGVVRTP EEEEECCHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHCCCHHHHHCCCCHHHHHHHCCC AEKQDWPAIKQGIKTLHSLLLVADEALSRQPWLSGDAFGMGDIPLGCFAYGWFEMPIERP CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHEECCCCCC PLPHLQAWYERLKTRPAYRKAVMTPLT CCHHHHHHHHHHHCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]