| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044864
Identifier: 66044864
GI number: 66044864
Start: 1820804
End: 1821322
Strand: Reverse
Name: 66044864
Synonym: Psyr_1619
Alternate gene names: NA
Gene position: 1821322-1820804 (Counterclockwise)
Preceding gene: 66044865
Following gene: 66044863
Centisome position: 29.89
GC content: 55.49
Gene sequence:
>519_bases ATGTCTGACTTCGACCTGCCGATGATCGATGCCACGGTTTTCATGGGCATGCACCATGCCGATCCCGGCGTGCGTGACAA ATCCCTGGAGTTCTTCTCCCGGTTCTACGAGAGCAGCGTGCAGATGAATTTCGCCCAGATAGGCATTTGCGACGCCATCA TCTGGAAGAAAGGCCGTGCCCTGCAGGACGCCTATTACCCGTTCATGGATGTCTTGCACACCGACATGGCAATACAGCGT GAGGGCTATAGCGAACAGGTGCTCCAGCGCGCAGCAGGTGAAACGCTGTTCAGAGGTCTGCCGGCCGACAAGAAACTGCT GGCTGCTCAAGTGCTGGAGCAGGAAATCCCGTTTTATACCCACGATCCGGAGTTGCTGCGCCTGCAAGTGCTGCAGCCTT TCCTTCAACCATTCGAAAACACCATTCGACGGCAGACGTTCCCGAAGATGCTCCAGCGTCTCTATGACCAGTCCTGCGCC ATGGTGATCAGCAACGAGGACTTTCAACATGTCTGGTAA
Upstream 100 bases:
>100_bases CCGGAAAAAGGCCAGCGCTACATACGCCTGGCACTGGCACGCAAGCCGGACGAATTCGAGGCCGCCGTTCAGGCAATTGC GCAGGCACTGGAGAACCTCC
Downstream 100 bases:
>100_bases AAGCATTCTGGTCCCCCTGATAACGCCTCTGAACGCGCAGGAGCAAGTCTGCGAAGCCAGCCTCGAACGCCTTTTGGGTA GCCTCGCGCCCCATGTCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MSDFDLPMIDATVFMGMHHADPGVRDKSLEFFSRFYESSVQMNFAQIGICDAIIWKKGRALQDAYYPFMDVLHTDMAIQR EGYSEQVLQRAAGETLFRGLPADKKLLAAQVLEQEIPFYTHDPELLRLQVLQPFLQPFENTIRRQTFPKMLQRLYDQSCA MVISNEDFQHVW
Sequences:
>Translated_172_residues MSDFDLPMIDATVFMGMHHADPGVRDKSLEFFSRFYESSVQMNFAQIGICDAIIWKKGRALQDAYYPFMDVLHTDMAIQR EGYSEQVLQRAAGETLFRGLPADKKLLAAQVLEQEIPFYTHDPELLRLQVLQPFLQPFENTIRRQTFPKMLQRLYDQSCA MVISNEDFQHVW >Mature_171_residues SDFDLPMIDATVFMGMHHADPGVRDKSLEFFSRFYESSVQMNFAQIGICDAIIWKKGRALQDAYYPFMDVLHTDMAIQRE GYSEQVLQRAAGETLFRGLPADKKLLAAQVLEQEIPFYTHDPELLRLQVLQPFLQPFENTIRRQTFPKMLQRLYDQSCAM VISNEDFQHVW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20073; Mature: 19942
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDFDLPMIDATVFMGMHHADPGVRDKSLEFFSRFYESSVQMNFAQIGICDAIIWKKGRA CCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LQDAYYPFMDVLHTDMAIQREGYSEQVLQRAAGETLFRGLPADKKLLAAQVLEQEIPFYT HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC HDPELLRLQVLQPFLQPFENTIRRQTFPKMLQRLYDQSCAMVISNEDFQHVW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCC >Mature Secondary Structure SDFDLPMIDATVFMGMHHADPGVRDKSLEFFSRFYESSVQMNFAQIGICDAIIWKKGRA CCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH LQDAYYPFMDVLHTDMAIQREGYSEQVLQRAAGETLFRGLPADKKLLAAQVLEQEIPFYT HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC HDPELLRLQVLQPFLQPFENTIRRQTFPKMLQRLYDQSCAMVISNEDFQHVW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA