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The map label for this gene is 66044860

Identifier: 66044860

GI number: 66044860

Start: 1817714

End: 1818898

Strand: Direct

Name: 66044860

Synonym: Psyr_1615

Alternate gene names: NA

Gene position: 1817714-1818898 (Clockwise)

Preceding gene: 66044859

Following gene: 66044866

Centisome position: 29.83

GC content: 60.93

Gene sequence:

>1185_bases
ATGCCAGATCCTGCTGTTGCGATCAATGCTGTGAGGAGTCCGGTCGAACCGGTAACCGGGCTCATTCTTTCAGGTGGTGG
TGCACGTGCCGCCTATCAGGTCGGGGTGCTTGCAGGCATTGCCGACCTGTTGCCTGCCGGGGCGCCCAACCCTTTTCCGG
TCATTGTCGGCACGTCGGCAGGGGCGATCAATGCAGTGAAACTGGCCAGCGGTGCGCTGCACTTTCGCATTGCCATTCAC
CAATTGACCGAGTTCTGGCAGTCATTTCGCAGTCATCAGGTTTTACGCAGCGACTGGTCGGGTGTGATCCACCAGGCCAG
CCGGTTTTTTGGCCGCAGCCTGATGGGCTTCGGACGAAACATTCCCGTTGCCTTGCTCAACAGCTCACCGCTGCGTGAAC
TGCTCAACGAGCGGCTGGACCTTTCCGGGATCGAAGCGGCGATCAATGCTCACCACCTGCGCGCGGTGGCGGTGACAGCC
TTTGGCTACGAGTCGGGGCAAGCGGTCACGTTTTATCAAGGGCGGGGCACCATCGAGCCGTGGTTACGTCATCGGCGTAT
CGGTCGTCCGACGCAACTCACCGTGGATCACCTGCTTGCCAGCTCGGCTATCCCGTTGCTGTTCGCTCCAGTGATGCTCG
ATAAGGAATACTTTGGTGACGGAGCCGTGCGTCAATCTGCACCGATCAGCCCGGCGCTGCATCTAGGGGCCAATCGGGTG
CTGGTCGTGGGTGTCAGCGGCAATCCGCGCGGGCTTAAAAGCGAACGACCCGCACCACGTCCACCGAACGGCATGCAGCC
GAGTCTGGCGCAGATCAGCGGGCACATGCTCAACAGCACCTTTATTGATAACCTGGAAAGCGATATCGAATTGCTTGAAC
GACTGAACACGGCCAGCGCGTTGCTGCCCGATGAGCAGATCAGGCAGCCGGGCATGGAGCCGGTGGAAGTGCTGGTGATT
TCGCCGAGCCGTCCGCTGGATGAAATCGCGGCCCGCCACCGCCGTGAACTGCCCCCCGCACTGCGCACGTTCCTGCGCGG
GCCGGGCGCGACCAGGAGCAGCGGTGCCAGTGTGCTGAGCTATCTGCTGTTCGAGTCAGGTTATTGCAGCGAATTGATCG
AGCTGGGGCGTCACGATGCGATTGCTCAGGGTGCCGAACTGAAGCGCTTTTTGCGTCTGACCTGA

Upstream 100 bases:

>100_bases
TTTGGGCCCATCGACGCTTCAAAAGTCGACCGCCAGGTGAACCGAAGCTATACAACAAGCATAAATAAAACGCGTCTTCG
ATCACCGAGGTCAGTTGTAG

Downstream 100 bases:

>100_bases
CGTCGCCACGGCAGGAGCGAGCCCTGCCGTGGAGCGCGCTGTTATCTCACTCGGCGTACCTGCAACTGACCGCACGGCGG
ACCGCTCAGTTGCTCCCCGG

Product: patatin

Products: NA

Alternate protein names: Patatin Family Protein; Alpha-Beta Hydrolase Family Esterase; Phospholipase Patatin Family; Patatin-Like Phospholipase Family; Patatin Like Phospholipase; Patatin-Like Phospholipase; Esterase; Patatin Family Phospholipase; Patatin-Like Phospholipase Family Protein; Lipid Acyl Hydrolase; Esterase Of Alpha-Beta Hydrolase Superfamily Protein; Phospholipase Patatin Family Protein; Phospholipase; Alpha-Beta Hydrolase Superfamily Protein

Number of amino acids: Translated: 394; Mature: 393

Protein sequence:

>394_residues
MPDPAVAINAVRSPVEPVTGLILSGGGARAAYQVGVLAGIADLLPAGAPNPFPVIVGTSAGAINAVKLASGALHFRIAIH
QLTEFWQSFRSHQVLRSDWSGVIHQASRFFGRSLMGFGRNIPVALLNSSPLRELLNERLDLSGIEAAINAHHLRAVAVTA
FGYESGQAVTFYQGRGTIEPWLRHRRIGRPTQLTVDHLLASSAIPLLFAPVMLDKEYFGDGAVRQSAPISPALHLGANRV
LVVGVSGNPRGLKSERPAPRPPNGMQPSLAQISGHMLNSTFIDNLESDIELLERLNTASALLPDEQIRQPGMEPVEVLVI
SPSRPLDEIAARHRRELPPALRTFLRGPGATRSSGASVLSYLLFESGYCSELIELGRHDAIAQGAELKRFLRLT

Sequences:

>Translated_394_residues
MPDPAVAINAVRSPVEPVTGLILSGGGARAAYQVGVLAGIADLLPAGAPNPFPVIVGTSAGAINAVKLASGALHFRIAIH
QLTEFWQSFRSHQVLRSDWSGVIHQASRFFGRSLMGFGRNIPVALLNSSPLRELLNERLDLSGIEAAINAHHLRAVAVTA
FGYESGQAVTFYQGRGTIEPWLRHRRIGRPTQLTVDHLLASSAIPLLFAPVMLDKEYFGDGAVRQSAPISPALHLGANRV
LVVGVSGNPRGLKSERPAPRPPNGMQPSLAQISGHMLNSTFIDNLESDIELLERLNTASALLPDEQIRQPGMEPVEVLVI
SPSRPLDEIAARHRRELPPALRTFLRGPGATRSSGASVLSYLLFESGYCSELIELGRHDAIAQGAELKRFLRLT
>Mature_393_residues
PDPAVAINAVRSPVEPVTGLILSGGGARAAYQVGVLAGIADLLPAGAPNPFPVIVGTSAGAINAVKLASGALHFRIAIHQ
LTEFWQSFRSHQVLRSDWSGVIHQASRFFGRSLMGFGRNIPVALLNSSPLRELLNERLDLSGIEAAINAHHLRAVAVTAF
GYESGQAVTFYQGRGTIEPWLRHRRIGRPTQLTVDHLLASSAIPLLFAPVMLDKEYFGDGAVRQSAPISPALHLGANRVL
VVGVSGNPRGLKSERPAPRPPNGMQPSLAQISGHMLNSTFIDNLESDIELLERLNTASALLPDEQIRQPGMEPVEVLVIS
PSRPLDEIAARHRRELPPALRTFLRGPGATRSSGASVLSYLLFESGYCSELIELGRHDAIAQGAELKRFLRLT

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42400; Mature: 42269

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDPAVAINAVRSPVEPVTGLILSGGGARAAYQVGVLAGIADLLPAGAPNPFPVIVGTSA
CCCCHHHHHHHHCCHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC
GAINAVKLASGALHFRIAIHQLTEFWQSFRSHQVLRSDWSGVIHQASRFFGRSLMGFGRN
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IPVALLNSSPLRELLNERLDLSGIEAAINAHHLRAVAVTAFGYESGQAVTFYQGRGTIEP
CCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEEEECCCCCCEEEEECCCCCHHH
WLRHRRIGRPTQLTVDHLLASSAIPLLFAPVMLDKEYFGDGAVRQSAPISPALHLGANRV
HHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCEE
LVVGVSGNPRGLKSERPAPRPPNGMQPSLAQISGHMLNSTFIDNLESDIELLERLNTASA
EEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLPDEQIRQPGMEPVEVLVISPSRPLDEIAARHRRELPPALRTFLRGPGATRSSGASVLS
CCCHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHH
YLLFESGYCSELIELGRHDAIAQGAELKRFLRLT
HHHHCCCCHHHHHHCCCCHHHHCHHHHHHHHHCC
>Mature Secondary Structure 
PDPAVAINAVRSPVEPVTGLILSGGGARAAYQVGVLAGIADLLPAGAPNPFPVIVGTSA
CCCHHHHHHHHCCHHHHHHEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC
GAINAVKLASGALHFRIAIHQLTEFWQSFRSHQVLRSDWSGVIHQASRFFGRSLMGFGRN
CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
IPVALLNSSPLRELLNERLDLSGIEAAINAHHLRAVAVTAFGYESGQAVTFYQGRGTIEP
CCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHEEEEEEECCCCCCEEEEECCCCCHHH
WLRHRRIGRPTQLTVDHLLASSAIPLLFAPVMLDKEYFGDGAVRQSAPISPALHLGANRV
HHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCEE
LVVGVSGNPRGLKSERPAPRPPNGMQPSLAQISGHMLNSTFIDNLESDIELLERLNTASA
EEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLPDEQIRQPGMEPVEVLVISPSRPLDEIAARHRRELPPALRTFLRGPGATRSSGASVLS
CCCHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHH
YLLFESGYCSELIELGRHDAIAQGAELKRFLRLT
HHHHCCCCHHHHHHCCCCHHHHCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA