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The map label for this gene is yajD [H]

Identifier: 66044817

GI number: 66044817

Start: 1767589

End: 1767963

Strand: Reverse

Name: yajD [H]

Synonym: Psyr_1572

Alternate gene names: 66044817

Gene position: 1767963-1767589 (Counterclockwise)

Preceding gene: 66044818

Following gene: 66044816

Centisome position: 29.01

GC content: 61.87

Gene sequence:

>375_bases
ATGAGCACGGCCAATCCTCCTTCCCATACTGCCAAGCTGGACCGCATCCTGGCCGACGCCCAGCGCGACCGCGAGATGGG
CTACCGTGACAAGGCGCTGCGCATGTACCCGCATGTTTGCGGCCGCTGCGCGCGCGAGTTCGCAGGCAAACGTCTCAGCG
AATTGACCGTACACCACCGCGACCACAACCATGACAACAACCCGCAGGACGGCTCCAACTGGGAGCTGCTGTGCCTGTAT
TGCCACGATAACGAGCACTCGCGCTACACCGATCAGCAGTACTTCGCCGATGGCTCCCTGGGCAGTCCGAAAACCGCCAA
GGCGACCCATAACCCGTTCGCTGCACTGGCCGGGCTGATGAAAAAGGACGAGTAA

Upstream 100 bases:

>100_bases
GGTCGATGGTCAATTACTCTCCCAACAGGTGTGAGTTTGCCTATCTGGCGCTAAACTTGCCGATATTCCGCTTTCAATGC
GCACACGCACAGGTGACACC

Downstream 100 bases:

>100_bases
CCTCGGCGCTTTCGACCAGCCACGCTCCCCTGCCCTACCCGCACTTCCCCTGGCCTGCGGCCACCCGACCGACCGGATAC
TTTGTCATGCCCACCCGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MSTANPPSHTAKLDRILADAQRDREMGYRDKALRMYPHVCGRCAREFAGKRLSELTVHHRDHNHDNNPQDGSNWELLCLY
CHDNEHSRYTDQQYFADGSLGSPKTAKATHNPFAALAGLMKKDE

Sequences:

>Translated_124_residues
MSTANPPSHTAKLDRILADAQRDREMGYRDKALRMYPHVCGRCAREFAGKRLSELTVHHRDHNHDNNPQDGSNWELLCLY
CHDNEHSRYTDQQYFADGSLGSPKTAKATHNPFAALAGLMKKDE
>Mature_123_residues
STANPPSHTAKLDRILADAQRDREMGYRDKALRMYPHVCGRCAREFAGKRLSELTVHHRDHNHDNNPQDGSNWELLCLYC
HDNEHSRYTDQQYFADGSLGSPKTAKATHNPFAALAGLMKKDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786611, Length=102, Percent_Identity=56.8627450980392, Blast_Score=127, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002711
- InterPro:   IPR003615
- InterPro:   IPR015880 [H]

Pfam domain/function: PF01844 HNH [H]

EC number: NA

Molecular weight: Translated: 14123; Mature: 13992

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTANPPSHTAKLDRILADAQRDREMGYRDKALRMYPHVCGRCAREFAGKRLSELTVHHR
CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DHNHDNNPQDGSNWELLCLYCHDNEHSRYTDQQYFADGSLGSPKTAKATHNPFAALAGLM
CCCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
KKDE
HCCC
>Mature Secondary Structure 
STANPPSHTAKLDRILADAQRDREMGYRDKALRMYPHVCGRCAREFAGKRLSELTVHHR
CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DHNHDNNPQDGSNWELLCLYCHDNEHSRYTDQQYFADGSLGSPKTAKATHNPFAALAGLM
CCCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
KKDE
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]