| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044818
Identifier: 66044818
GI number: 66044818
Start: 1768030
End: 1768506
Strand: Reverse
Name: 66044818
Synonym: Psyr_1573
Alternate gene names: NA
Gene position: 1768506-1768030 (Counterclockwise)
Preceding gene: 66044819
Following gene: 66044817
Centisome position: 29.02
GC content: 57.86
Gene sequence:
>477_bases ATGTCAGAACCACTGTCCAACCTGAACAACGCCATACGCGACATGCTGCTCGATTGCGGCCTGTTCGACACCCTGCTGCC GGGCGATTTCTTTACCGTAGCCGGCTATTTCAGCATTACCGATATCGATAAAGGCGAGACCATCTTTGCCGAGGGCGATG CCGGAACCTTCATGTGCATCATCCATCAGGGCACCGTGTCTGTGCAGAAGCTTGCCGCAGACGGTCAACAGGTGGAAATC GCCGTTCTGCGCCACGGCCGCGCCTTCGGAGAAATGGCGGTGCTCGATGGCGAGCGCCGCTCGGCCAGTTGTATCGCAGC CACCAGTTGCCAGCTATTGAACCTGGGCCGTGATTCGCTGGACAAGATGCTCGAGGAAGCACCGAAAATCGCCGCCAAGA TCATTCGTGCCCTGGCCATCTCGTTGTCCAAGCGCCTGCGCATGGTCGATGGTCAATTACTCTCCCAACAGGTGTGA
Upstream 100 bases:
>100_bases AAGGTATTGCAGATCGCTGAATGAACTTGGTGTGAAACACCTGTCTTACTAGGATCGGGGGCAGCGGAGTTGCCCCTTTG TCAGGATTACCAGACCTAAC
Downstream 100 bases:
>100_bases GTTTGCCTATCTGGCGCTAAACTTGCCGATATTCCGCTTTCAATGCGCACACGCACAGGTGACACCATGAGCACGGCCAA TCCTCCTTCCCATACTGCCA
Product: cyclic nucleotide-binding
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MSEPLSNLNNAIRDMLLDCGLFDTLLPGDFFTVAGYFSITDIDKGETIFAEGDAGTFMCIIHQGTVSVQKLAADGQQVEI AVLRHGRAFGEMAVLDGERRSASCIAATSCQLLNLGRDSLDKMLEEAPKIAAKIIRALAISLSKRLRMVDGQLLSQQV
Sequences:
>Translated_158_residues MSEPLSNLNNAIRDMLLDCGLFDTLLPGDFFTVAGYFSITDIDKGETIFAEGDAGTFMCIIHQGTVSVQKLAADGQQVEI AVLRHGRAFGEMAVLDGERRSASCIAATSCQLLNLGRDSLDKMLEEAPKIAAKIIRALAISLSKRLRMVDGQLLSQQV >Mature_157_residues SEPLSNLNNAIRDMLLDCGLFDTLLPGDFFTVAGYFSITDIDKGETIFAEGDAGTFMCIIHQGTVSVQKLAADGQQVEIA VLRHGRAFGEMAVLDGERRSASCIAATSCQLLNLGRDSLDKMLEEAPKIAAKIIRALAISLSKRLRMVDGQLLSQQV
Specific function: Unknown
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17077; Mature: 16946
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS50042 CNMP_BINDING_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPLSNLNNAIRDMLLDCGLFDTLLPGDFFTVAGYFSITDIDKGETIFAEGDAGTFMCI CCCHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHEEEEEECCCCCEEEEECCCCEEEEE IHQGTVSVQKLAADGQQVEIAVLRHGRAFGEMAVLDGERRSASCIAATSCQLLNLGRDSL EECCCHHHHHHHCCCCEEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCHHHH DKMLEEAPKIAAKIIRALAISLSKRLRMVDGQLLSQQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SEPLSNLNNAIRDMLLDCGLFDTLLPGDFFTVAGYFSITDIDKGETIFAEGDAGTFMCI CCHHHHHHHHHHHHHHHCCHHHHHCCCCHHHHHHEEEEEECCCCCEEEEECCCCEEEEE IHQGTVSVQKLAADGQQVEIAVLRHGRAFGEMAVLDGERRSASCIAATSCQLLNLGRDSL EECCCHHHHHHHCCCCEEEEEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCHHHH DKMLEEAPKIAAKIIRALAISLSKRLRMVDGQLLSQQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA