| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044774
Identifier: 66044774
GI number: 66044774
Start: 1717367
End: 1719127
Strand: Reverse
Name: 66044774
Synonym: Psyr_1527
Alternate gene names: NA
Gene position: 1719127-1717367 (Counterclockwise)
Preceding gene: 66044775
Following gene: 66044773
Centisome position: 28.21
GC content: 54.46
Gene sequence:
>1761_bases ATGGCTGGCAAACTGACTGCAGATGAAATCTCGGGCAAGTTGTTACAAGGCTCATTCAGTCGTTCTGGCCCGACGGTTGA TCAACTGCCGGACCCGATTGTAGATACGCCCATGGTTCTTACCCTGGACGAGATGAAAGCCTTCGAGCAAAACCCTCGCA CCGTAACCAATGCGAAGTACAAGGAGATCAAAGACTCCATCAGGCAGCGCGGCTTGGATCACCGCCCTACAGTAACGCGT CGACCTGGCGAAATTAAATACACCATCAACAACGGCGGCAATACACGTCTGCAGATTCTTCGGGAGCTGTACAGCGAAAC CGGCGAAGACCGTTTCTATCGGCACAATGTTCTGTTTCGGCCCTGGGACTCAGCACGTGGGGAGATTATCGCTCTCACAG GTCACCTTTCGGAAAACGATCTTCGCGGTTCTCTGATGTTCATCGAAAGGGCGGTGGGCATAGAAAATGCTCGTGCCATC TATGAGAAAGAAGCCGGTGAGTCCATATCTCAAAGGGAACTGGTTCGGAGGCTCAGTGCCGACGGCTATCCGGTTTCCCA GTCACATATCAGCAAGATGCAGGATACGGTTCGCAGCCTTCTTCCAGTGATACCCAGTGCGCTTTACTCAGGGTTAGGAA AACACCAGGTGGAGCGTCTCCTTTCCCTACGCAAGGCCGCTGGCCAGACCTGGATCACGCATACAGAGGGGAAAGAACAC ATCCCTGACTTCGAAGGTTTGTTCCAGGACGTACTATCTCTGTTCGATGGCGATGCGAGCGAGTTTGTCTACGAGCGGGT TCAGGATGAGTTGATCAGTCACATGCAGTCGGGAACGGGGCTGTCTTACGAGCAGCTCCTACTCACATTGAGTGAAAATC AGAACCAAGCACGACGTTCATCTGTGATCGATACCCCAGTGAGTTTGACGCCAGCTCAACAGCCTGGACCTGCTGGCCTT CCGCCTGAAGCTGACGACGGTCCGGGTAGCCATCAGCAACAGGAACCAGCCATTCAGGCTCGCCCTTCTGAGGCTGGCAA AAACAAGGGCAAACAGGACGTATCGCCAAGGTCTTCGAAAACCGAAACTATCGATAACAAGCCCCCTCAGGCTCCTGAGC TCACCGAGCAGGAGCGCGCAGAAAGGCTTGCTGGGCATATCGTTAGCTCGATATCCACCACCGAACGTGTGCAGGATGTG AAGCGGCAGTTGGCAGCCCTCGATGGGGAAAATCTGCCCGACTTCAAGACAAATGCGCTGATTTCGATACCGGTCCAAGC GGGTGGGTTACATCCTATCTCTGACGTCTGGTACATCGAACGTATCCTCGACCAGCCGGATGAATTGCGGCCGGTAATCG CTCAGCTCGCCCGAGAGATCGCCCACCTGTCAGGCATCAATCCAGACAGCGTGATTGATGTCCCGGGTGGTTTGGGCTTC CTCTGCCAAGACCCTCCTGAAAATTTAGACCTCAGCGATCTGGCCAATAACGTACTGACCCTTCTCCAGTCGATTAGTGG GGTGTATGCAATTGCCTTGATCAAAGAGTCCCCCGAGCAACCACTGGATGTGTCCGAGTTTCAGTTCACCGCCGCGCTGG CCCAGTTGCTGTTAGGTAGCCCGAGATACGAAGACCGTGAAGCAATACTCCAGGGGCGCTTGGACGATACCTGCATCGTT AAGCTTTTCCGACTCATTCGCCTCGGCCGACGGTTGGTGGAGCTGGAAGTTGGAAGCGTCAGCGTGGTTCAGACCCCATG A
Upstream 100 bases:
>100_bases AGCAGGAGATTGCGAGGCTTACGGCTGTGATCGATGTGCTGCTCAAAGGCGGAACACCGACCAGCAACGTCATCCAACTT CCTGAGGCGGGCCAATAATC
Downstream 100 bases:
>100_bases GGTTTTTTTCCGGCGTTGTGAGACAGGAGTTTGGTCATGTCGAAAAAACATAACCCCCTCAACGAAGCCATGGTCGCGCA AATTCTGCATCACTTGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 586; Mature: 585
Protein sequence:
>586_residues MAGKLTADEISGKLLQGSFSRSGPTVDQLPDPIVDTPMVLTLDEMKAFEQNPRTVTNAKYKEIKDSIRQRGLDHRPTVTR RPGEIKYTINNGGNTRLQILRELYSETGEDRFYRHNVLFRPWDSARGEIIALTGHLSENDLRGSLMFIERAVGIENARAI YEKEAGESISQRELVRRLSADGYPVSQSHISKMQDTVRSLLPVIPSALYSGLGKHQVERLLSLRKAAGQTWITHTEGKEH IPDFEGLFQDVLSLFDGDASEFVYERVQDELISHMQSGTGLSYEQLLLTLSENQNQARRSSVIDTPVSLTPAQQPGPAGL PPEADDGPGSHQQQEPAIQARPSEAGKNKGKQDVSPRSSKTETIDNKPPQAPELTEQERAERLAGHIVSSISTTERVQDV KRQLAALDGENLPDFKTNALISIPVQAGGLHPISDVWYIERILDQPDELRPVIAQLAREIAHLSGINPDSVIDVPGGLGF LCQDPPENLDLSDLANNVLTLLQSISGVYAIALIKESPEQPLDVSEFQFTAALAQLLLGSPRYEDREAILQGRLDDTCIV KLFRLIRLGRRLVELEVGSVSVVQTP
Sequences:
>Translated_586_residues MAGKLTADEISGKLLQGSFSRSGPTVDQLPDPIVDTPMVLTLDEMKAFEQNPRTVTNAKYKEIKDSIRQRGLDHRPTVTR RPGEIKYTINNGGNTRLQILRELYSETGEDRFYRHNVLFRPWDSARGEIIALTGHLSENDLRGSLMFIERAVGIENARAI YEKEAGESISQRELVRRLSADGYPVSQSHISKMQDTVRSLLPVIPSALYSGLGKHQVERLLSLRKAAGQTWITHTEGKEH IPDFEGLFQDVLSLFDGDASEFVYERVQDELISHMQSGTGLSYEQLLLTLSENQNQARRSSVIDTPVSLTPAQQPGPAGL PPEADDGPGSHQQQEPAIQARPSEAGKNKGKQDVSPRSSKTETIDNKPPQAPELTEQERAERLAGHIVSSISTTERVQDV KRQLAALDGENLPDFKTNALISIPVQAGGLHPISDVWYIERILDQPDELRPVIAQLAREIAHLSGINPDSVIDVPGGLGF LCQDPPENLDLSDLANNVLTLLQSISGVYAIALIKESPEQPLDVSEFQFTAALAQLLLGSPRYEDREAILQGRLDDTCIV KLFRLIRLGRRLVELEVGSVSVVQTP >Mature_585_residues AGKLTADEISGKLLQGSFSRSGPTVDQLPDPIVDTPMVLTLDEMKAFEQNPRTVTNAKYKEIKDSIRQRGLDHRPTVTRR PGEIKYTINNGGNTRLQILRELYSETGEDRFYRHNVLFRPWDSARGEIIALTGHLSENDLRGSLMFIERAVGIENARAIY EKEAGESISQRELVRRLSADGYPVSQSHISKMQDTVRSLLPVIPSALYSGLGKHQVERLLSLRKAAGQTWITHTEGKEHI PDFEGLFQDVLSLFDGDASEFVYERVQDELISHMQSGTGLSYEQLLLTLSENQNQARRSSVIDTPVSLTPAQQPGPAGLP PEADDGPGSHQQQEPAIQARPSEAGKNKGKQDVSPRSSKTETIDNKPPQAPELTEQERAERLAGHIVSSISTTERVQDVK RQLAALDGENLPDFKTNALISIPVQAGGLHPISDVWYIERILDQPDELRPVIAQLAREIAHLSGINPDSVIDVPGGLGFL CQDPPENLDLSDLANNVLTLLQSISGVYAIALIKESPEQPLDVSEFQFTAALAQLLLGSPRYEDREAILQGRLDDTCIVK LFRLIRLGRRLVELEVGSVSVVQTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64746; Mature: 64615
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGKLTADEISGKLLQGSFSRSGPTVDQLPDPIVDTPMVLTLDEMKAFEQNPRTVTNAKY CCCCCCHHHHCCHHHHCCCCCCCCCHHHCCCCCCCCCCEEEHHHHHHHHCCCCCCCCHHH KEIKDSIRQRGLDHRPTVTRRPGEIKYTINNGGNTRLQILRELYSETGEDRFYRHNVLFR HHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCEECCCCEEC PWDSARGEIIALTGHLSENDLRGSLMFIERAVGIENARAIYEKEAGESISQRELVRRLSA CCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCC DGYPVSQSHISKMQDTVRSLLPVIPSALYSGLGKHQVERLLSLRKAAGQTWITHTEGKEH CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCCC IPDFEGLFQDVLSLFDGDASEFVYERVQDELISHMQSGTGLSYEQLLLTLSENQNQARRS CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHH SVIDTPVSLTPAQQPGPAGLPPEADDGPGSHQQQEPAIQARPSEAGKNKGKQDVSPRSSK HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC TETIDNKPPQAPELTEQERAERLAGHIVSSISTTERVQDVKRQLAALDGENLPDFKTNAL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE ISIPVQAGGLHPISDVWYIERILDQPDELRPVIAQLAREIAHLSGINPDSVIDVPGGLGF EEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCC LCQDPPENLDLSDLANNVLTLLQSISGVYAIALIKESPEQPLDVSEFQFTAALAQLLLGS CCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCC PRYEDREAILQGRLDDTCIVKLFRLIRLGRRLVELEVGSVSVVQTP CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEECCCEEEEECC >Mature Secondary Structure AGKLTADEISGKLLQGSFSRSGPTVDQLPDPIVDTPMVLTLDEMKAFEQNPRTVTNAKY CCCCCHHHHCCHHHHCCCCCCCCCHHHCCCCCCCCCCEEEHHHHHHHHCCCCCCCCHHH KEIKDSIRQRGLDHRPTVTRRPGEIKYTINNGGNTRLQILRELYSETGEDRFYRHNVLFR HHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCEECCCCEEC PWDSARGEIIALTGHLSENDLRGSLMFIERAVGIENARAIYEKEAGESISQRELVRRLSA CCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHCC DGYPVSQSHISKMQDTVRSLLPVIPSALYSGLGKHQVERLLSLRKAAGQTWITHTEGKEH CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEECCCCCC IPDFEGLFQDVLSLFDGDASEFVYERVQDELISHMQSGTGLSYEQLLLTLSENQNQARRS CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHH SVIDTPVSLTPAQQPGPAGLPPEADDGPGSHQQQEPAIQARPSEAGKNKGKQDVSPRSSK HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC TETIDNKPPQAPELTEQERAERLAGHIVSSISTTERVQDVKRQLAALDGENLPDFKTNAL CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE ISIPVQAGGLHPISDVWYIERILDQPDELRPVIAQLAREIAHLSGINPDSVIDVPGGLGF EEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCC LCQDPPENLDLSDLANNVLTLLQSISGVYAIALIKESPEQPLDVSEFQFTAALAQLLLGS CCCCCCCCCCHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCC PRYEDREAILQGRLDDTCIVKLFRLIRLGRRLVELEVGSVSVVQTP CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA