| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is 66044773
Identifier: 66044773
GI number: 66044773
Start: 1716593
End: 1717330
Strand: Reverse
Name: 66044773
Synonym: Psyr_1526
Alternate gene names: NA
Gene position: 1717330-1716593 (Counterclockwise)
Preceding gene: 66044774
Following gene: 66044772
Centisome position: 28.18
GC content: 55.69
Gene sequence:
>738_bases ATGTCGAAAAAACATAACCCCCTCAACGAAGCCATGGTCGCGCAAATTCTGCATCACTTGCGCAACGGTGAAGTGAGGCG TTGCCTTGATATGGGACTGGACCCAGAAATTCTGGCAATGCTCCAGCATCCCTCATCACAAAGTGTGTTGCTGAACTCTG CAGTTATCTGGTGCCGCGTGGCGGTTGATCCGGACATGGTGAAGCGTCTGCTGGCGAACAAGGAGCGCACTGATCAGGAA AACCGAATCGTGCAGCGCGCGCTTCGTTTGGGGGCGACGACCCCAATGCTGCAGGAGTTCTTCGGCATGTCCCCCCAAGA AGTTTCCTTGCAACGGGTACTGGTAGGTGTTCCTGGACGCCCTGGGCGATTCAGAGACATTCCCGATGACGCACCTCTGT GGCATAGGTTTGTGCAACTGATGGAAGAGTACAACGTGGATCATACGGATGGTGTCGCATTACTGGATATCGCGATGATG CTGACGGAGGAGGTAAACATCCCTCCTGAAGAGCCCCACATCGTGCCTCCGGATCAGATCACCCTGGGCCTCGTCTGGAA CAAGATTCAAGGATGGCTGGCTCAGGACCTATACCCGACTGGCAAGAAGCGTAAATCGGCAAGCCTCGTAATGCTGGGGG AGTCGCGGCAACAGTCTAAAGCAAACGCTAATCGGAGCCGGCCGGGTCAAAGCCAGGCGAACAAGCCCGTGGGCAAGGTA GAAGGCGACCGGATGTGA
Upstream 100 bases:
>100_bases TCGCCTCGGCCGACGGTTGGTGGAGCTGGAAGTTGGAAGCGTCAGCGTGGTTCAGACCCCATGAGGTTTTTTTCCGGCGT TGTGAGACAGGAGTTTGGTC
Downstream 100 bases:
>100_bases TAAGGATGAACCGGCGCCCTTCTCTGGGGGGAGCCATTAATGCCGCTGCCGGGGCTCTACAAAATCATCTGCTGCTCCAG CAATTAAAGCTGGCCCAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MSKKHNPLNEAMVAQILHHLRNGEVRRCLDMGLDPEILAMLQHPSSQSVLLNSAVIWCRVAVDPDMVKRLLANKERTDQE NRIVQRALRLGATTPMLQEFFGMSPQEVSLQRVLVGVPGRPGRFRDIPDDAPLWHRFVQLMEEYNVDHTDGVALLDIAMM LTEEVNIPPEEPHIVPPDQITLGLVWNKIQGWLAQDLYPTGKKRKSASLVMLGESRQQSKANANRSRPGQSQANKPVGKV EGDRM
Sequences:
>Translated_245_residues MSKKHNPLNEAMVAQILHHLRNGEVRRCLDMGLDPEILAMLQHPSSQSVLLNSAVIWCRVAVDPDMVKRLLANKERTDQE NRIVQRALRLGATTPMLQEFFGMSPQEVSLQRVLVGVPGRPGRFRDIPDDAPLWHRFVQLMEEYNVDHTDGVALLDIAMM LTEEVNIPPEEPHIVPPDQITLGLVWNKIQGWLAQDLYPTGKKRKSASLVMLGESRQQSKANANRSRPGQSQANKPVGKV EGDRM >Mature_244_residues SKKHNPLNEAMVAQILHHLRNGEVRRCLDMGLDPEILAMLQHPSSQSVLLNSAVIWCRVAVDPDMVKRLLANKERTDQEN RIVQRALRLGATTPMLQEFFGMSPQEVSLQRVLVGVPGRPGRFRDIPDDAPLWHRFVQLMEEYNVDHTDGVALLDIAMML TEEVNIPPEEPHIVPPDQITLGLVWNKIQGWLAQDLYPTGKKRKSASLVMLGESRQQSKANANRSRPGQSQANKPVGKVE GDRM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27613; Mature: 27482
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKHNPLNEAMVAQILHHLRNGEVRRCLDMGLDPEILAMLQHPSSQSVLLNSAVIWCRV CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCCCHHHHHCEEEEEEE AVDPDMVKRLLANKERTDQENRIVQRALRLGATTPMLQEFFGMSPQEVSLQRVLVGVPGR ECCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHEECCCC PGRFRDIPDDAPLWHRFVQLMEEYNVDHTDGVALLDIAMMLTEEVNIPPEEPHIVPPDQI CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCE TLGLVWNKIQGWLAQDLYPTGKKRKSASLVMLGESRQQSKANANRSRPGQSQANKPVGKV EHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCC EGDRM CCCCC >Mature Secondary Structure SKKHNPLNEAMVAQILHHLRNGEVRRCLDMGLDPEILAMLQHPSSQSVLLNSAVIWCRV CCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCCCHHHHHCEEEEEEE AVDPDMVKRLLANKERTDQENRIVQRALRLGATTPMLQEFFGMSPQEVSLQRVLVGVPGR ECCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHEECCCC PGRFRDIPDDAPLWHRFVQLMEEYNVDHTDGVALLDIAMMLTEEVNIPPEEPHIVPPDQI CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCE TLGLVWNKIQGWLAQDLYPTGKKRKSASLVMLGESRQQSKANANRSRPGQSQANKPVGKV EHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCC EGDRM CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA